RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 PGA4P0DJD7 388 aa12.1□□□□□ -0.47
DDX11-228ENST00000545115 PGA3P0DJD8 388 aa12.1□□□□□ -0.47
DDX11-228ENST00000545115 NAT2P11245 290 aa12.1□□□□□ -0.47
DDX11-228ENST00000545115 MTPNP58546 118 aa12.1□□□□□ -0.47
DDX11-228ENST00000545115 SELENOVP59797 346 aa12.1□□□□□ -0.47
DDX11-228ENST00000545115 NKPD1Q17RQ9 610 aa12.1□□□□□ -0.47
DDX11-228ENST00000545115 LRFN4Q6PJG9 635 aa12.1□□□□□ -0.47
DDX11-228ENST00000545115 DEF8Q6ZN54 512 aa12.1□□□□□ -0.47
DDX11-228ENST00000545115 PATL1Q86TB9 770 aaKnown RBP12.1□□□□□ -0.47
DDX11-228ENST00000545115 MEX3DQ86XN8 651 aaKnown RBP12.1□□□□□ -0.47
DDX11-228ENST00000545115 SLC30A8Q8IWU4 369 aa12.1□□□□□ -0.47
DDX11-228ENST00000545115 DPP10Q8N608 796 aa12.1□□□□□ -0.47
DDX11-228ENST00000545115 SLC30A7Q8NEW0 376 aa12.1□□□□□ -0.47
DDX11-228ENST00000545115 VANGL1Q8TAA9 524 aaPredicted RBP12.1□□□□□ -0.47
DDX11-228ENST00000545115 YIPF5Q969M3 257 aa12.1□□□□□ -0.47
DDX11-228ENST00000545115 MPP4Q96JB8 637 aa12.1□□□□□ -0.47
DDX11-228ENST00000545115 CGREF1Q99674 301 aa12.1□□□□□ -0.47
DDX11-228ENST00000545115 SH3GL3Q99963 347 aa12.1□□□□□ -0.47
DDX11-228ENST00000545115 ZNF426Q9BUY5 554 aa12.1□□□□□ -0.47
DDX11-228ENST00000545115 ZNF416Q9BWM5 594 aa12.1□□□□□ -0.47
DDX11-228ENST00000545115 SLC19A3Q9BZV2 496 aa12.1□□□□□ -0.47
DDX11-228ENST00000545115 METTL17Q9H7H0 456 aaPredicted RBP12.1□□□□□ -0.47
DDX11-228ENST00000545115 HIF1ANQ9NWT6 349 aa12.1□□□□□ -0.47
DDX11-228ENST00000545115 GPR160Q9UJ42 338 aa12.1□□□□□ -0.47
DDX11-228ENST00000545115 SLC7A7Q9UM01 511 aa12.1□□□□□ -0.47
DDX11-228ENST00000545115 NDUFAF1Q9Y375 327 aa12.1□□□□□ -0.47
DDX11-228ENST00000545115 GRIP1Q9Y3R0 1128 aa12.1□□□□□ -0.47
DDX11-228ENST00000545115 IGLV3-9A0A075B6K5 115 aa12.09□□□□□ -0.47
DDX11-228ENST00000545115 FAM157AC9JC47 383 aa12.09□□□□□ -0.47
DDX11-228ENST00000545115 ANGPT2O15123 496 aa12.09□□□□□ -0.47
DDX11-228ENST00000545115 PPIHO43447 177 aaKnown RBP12.09□□□□□ -0.47
DDX11-228ENST00000545115 RP2O75695 350 aa12.09□□□□□ -0.47
DDX11-228ENST00000545115 LYPD3O95274 346 aa12.09□□□□□ -0.47
DDX11-228ENST00000545115 SNAP29O95721 258 aa12.09□□□□□ -0.47
DDX11-228ENST00000545115 BCL10O95999 233 aa12.09□□□□□ -0.47
DDX11-228ENST00000545115 PTHP01270 115 aa12.09□□□□□ -0.47
DDX11-228ENST00000545115 IGHG1P01857 330 aa12.09□□□□□ -0.47
DDX11-228ENST00000545115 HIST1H2ABP04908 130 aa12.09□□□□□ -0.47
DDX11-228ENST00000545115 QDPRP09417 244 aa12.09□□□□□ -0.47
DDX11-228ENST00000545115 ASAH2BP0C7U1 165 aa12.09□□□□□ -0.47
DDX11-228ENST00000545115 FAM157BP0CG42 384 aa12.09□□□□□ -0.47
DDX11-228ENST00000545115 GAAP10253 952 aa12.09□□□□□ -0.47
DDX11-228ENST00000545115 UMPSP11172 480 aa12.09□□□□□ -0.47
DDX11-228ENST00000545115 KLF3P57682 345 aaPredicted RBP12.09□□□□□ -0.47
DDX11-228ENST00000545115 SCGB2A2Q13296 93 aa12.09□□□□□ -0.47
DDX11-228ENST00000545115 SELPLGQ14242 412 aa12.09□□□□□ -0.47
DDX11-228ENST00000545115 SLC36A2Q495M3 483 aa12.09□□□□□ -0.47
DDX11-228ENST00000545115 NRN1LQ496H8 165 aa12.09□□□□□ -0.47
DDX11-228ENST00000545115 TMEM53Q6P2H8 277 aa12.09□□□□□ -0.47
DDX11-228ENST00000545115 HIST3H2AQ7L7L0 130 aa12.09□□□□□ -0.47
DDX11-228ENST00000545115 NANOGNBQ7Z5D8 188 aa12.09□□□□□ -0.47
DDX11-228ENST00000545115 RBM45Q8IUH3 476 aaKnown RBP12.09□□□□□ -0.47
DDX11-228ENST00000545115 LRRC17Q8N6Y2 441 aa12.09□□□□□ -0.47
DDX11-228ENST00000545115 OR4K5Q8NGD3 323 aa12.09□□□□□ -0.47
DDX11-228ENST00000545115 OR4D11Q8NGI4 311 aa12.09□□□□□ -0.47
DDX11-228ENST00000545115 OR51F2Q8NH61 342 aa12.09□□□□□ -0.47
DDX11-228ENST00000545115 SNX33Q8WV41 574 aa12.09□□□□□ -0.47
DDX11-228ENST00000545115 DYDC1Q8WWB3 177 aa12.09□□□□□ -0.47
DDX11-228ENST00000545115 HIST1H2ACQ93077 130 aa12.09□□□□□ -0.47
DDX11-228ENST00000545115 PCDHAC1Q9H158 963 aa12.09□□□□□ -0.47
DDX11-228ENST00000545115 OCEL1Q9H607 264 aa12.09□□□□□ -0.47
DDX11-228ENST00000545115 RNF121Q9H920 327 aa12.09□□□□□ -0.47
DDX11-228ENST00000545115 CDH20Q9HBT6 801 aa12.09□□□□□ -0.47
DDX11-228ENST00000545115 LPAR2Q9HBW0 351 aa12.09□□□□□ -0.47
DDX11-228ENST00000545115 TAAR3PQ9P1P4 343 aa12.09□□□□□ -0.47
DDX11-228ENST00000545115 A0A0A6YYJ9 748 aa12.08□□□□□ -0.48
DDX11-228ENST00000545115 C17orf100A8MU93 164 aa12.08□□□□□ -0.48
DDX11-228ENST00000545115 WNT9BO14905 357 aa12.08□□□□□ -0.48
DDX11-228ENST00000545115 CLPTM1O96005 669 aa12.08□□□□□ -0.48
DDX11-228ENST00000545115 CCL2P13500 99 aa12.08□□□□□ -0.48
DDX11-228ENST00000545115 ZNF250P15622 560 aa12.08□□□□□ -0.48
DDX11-228ENST00000545115 CD247P20963 164 aa12.08□□□□□ -0.48
DDX11-228ENST00000545115 PCGF2P35227 344 aa12.08□□□□□ -0.48
DDX11-228ENST00000545115 RAD52P43351 418 aa12.08□□□□□ -0.48
DDX11-228ENST00000545115 MAGEB1P43366 347 aa12.08□□□□□ -0.48
DDX11-228ENST00000545115 CLRN1P58418 232 aa12.08□□□□□ -0.48
DDX11-228ENST00000545115 TBC1D28Q2M2D7 210 aa12.08□□□□□ -0.48
DDX11-228ENST00000545115 PCGF3Q3KNV8 242 aa12.08□□□□□ -0.48
DDX11-228ENST00000545115 ALKBH6Q3KRA9 238 aa12.08□□□□□ -0.48
DDX11-228ENST00000545115 MMEL1Q495T6 779 aa12.08□□□□□ -0.48
DDX11-228ENST00000545115 INTS11Q5TA45 600 aaKnown RBP12.08□□□□□ -0.48
DDX11-228ENST00000545115 TMEM154Q6P9G4 183 aa12.08□□□□□ -0.48
DDX11-228ENST00000545115 SHQ1Q6PI26 577 aaKnown RBP12.08□□□□□ -0.48
DDX11-228ENST00000545115 SLC16A14Q7RTX9 510 aa12.08□□□□□ -0.48
DDX11-228ENST00000545115 RETREG3Q86VR2 466 aa12.08□□□□□ -0.48
DDX11-228ENST00000545115 TSPYL5Q86VY4 417 aaPredicted RBP12.08□□□□□ -0.48
DDX11-228ENST00000545115 PAQR4Q8N4S7 273 aaPredicted RBP12.08□□□□□ -0.48
DDX11-228ENST00000545115 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.08□□□□□ -0.48
DDX11-228ENST00000545115 NOXO1Q8NFA2 376 aa12.08□□□□□ -0.48
DDX11-228ENST00000545115 OR1J2Q8NGS2 313 aa12.08□□□□□ -0.48
DDX11-228ENST00000545115 SYNPRQ8TBG9 265 aa12.08□□□□□ -0.48
DDX11-228ENST00000545115 SLC26A7Q8TE54 656 aa12.08□□□□□ -0.48
DDX11-228ENST00000545115 RASSF5Q8WWW0 418 aa12.08□□□□□ -0.48
DDX11-228ENST00000545115 STON2Q8WXE9 905 aa12.08□□□□□ -0.48
DDX11-228ENST00000545115 ATP6V1G3Q96LB4 118 aa12.08□□□□□ -0.48
DDX11-228ENST00000545115 LRRC37BQ96QE4 947 aa12.08□□□□□ -0.48
DDX11-228ENST00000545115 BCL2L14Q9BZR8 327 aa12.08□□□□□ -0.48
DDX11-228ENST00000545115 KAT8Q9H7Z6 458 aaKnown RBP12.08□□□□□ -0.48
DDX11-228ENST00000545115 HINT3Q9NQE9 182 aaKnown RBP12.08□□□□□ -0.48
DDX11-228ENST00000545115 SLCO1C1Q9NYB5 712 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms