RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 IQCF1Q8N6M8 205 aa11.55□□□□□ -0.56
DDX11-227ENST00000544652 NOXO1Q8NFA2 376 aa11.55□□□□□ -0.56
DDX11-227ENST00000544652 FNDC8Q8TC99 324 aa11.55□□□□□ -0.56
DDX11-227ENST00000544652 HRASLS5Q96KN8 279 aa11.55□□□□□ -0.56
DDX11-227ENST00000544652 RASSF4Q9H2L5 321 aa11.55□□□□□ -0.56
DDX11-227ENST00000544652 TOR3AQ9H497 397 aa11.55□□□□□ -0.56
DDX11-227ENST00000544652 CMC2Q9NRP2 79 aa11.55□□□□□ -0.56
DDX11-227ENST00000544652 GLTPQ9NZD2 209 aa11.55□□□□□ -0.56
DDX11-227ENST00000544652 VSX1Q9NZR4 365 aaPredicted RBP11.55□□□□□ -0.56
DDX11-227ENST00000544652 NBASA2RRP1 2371 aa11.55□□□□□ -0.56
DDX11-227ENST00000544652 PRSS37A4D1T9 235 aa11.54□□□□□ -0.56
DDX11-227ENST00000544652 SURF4O15260 269 aa11.54□□□□□ -0.56
DDX11-227ENST00000544652 SLC16A6O15403 523 aa11.54□□□□□ -0.56
DDX11-227ENST00000544652 ARHGEF9O43307 516 aa11.54□□□□□ -0.56
DDX11-227ENST00000544652 ZG16O60844 167 aa11.54□□□□□ -0.56
DDX11-227ENST00000544652 HMGN1P05114 100 aa11.54□□□□□ -0.56
DDX11-227ENST00000544652 ZNF16P17020 682 aaPredicted RBP11.54□□□□□ -0.56
DDX11-227ENST00000544652 NOS3P29474 1203 aa11.54□□□□□ -0.56
DDX11-227ENST00000544652 CSNK1A1P48729 337 aa11.54□□□□□ -0.56
DDX11-227ENST00000544652 EFNB1P98172 346 aa11.54□□□□□ -0.56
DDX11-227ENST00000544652 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.54□□□□□ -0.56
DDX11-227ENST00000544652 LGALS3BPQ08380 585 aa11.54□□□□□ -0.56
DDX11-227ENST00000544652 CDSNQ15517 529 aa11.54□□□□□ -0.56
DDX11-227ENST00000544652 ZIK1Q3SY52 487 aaPredicted RBP11.54□□□□□ -0.56
DDX11-227ENST00000544652 ZNF474Q6S9Z5 364 aaPredicted RBP11.54□□□□□ -0.56
DDX11-227ENST00000544652 BEND4Q6ZU67 534 aa11.54□□□□□ -0.56
DDX11-227ENST00000544652 LINGO2Q7L985 606 aa11.54□□□□□ -0.56
DDX11-227ENST00000544652 NPEPL1Q8NDH3 523 aa11.54□□□□□ -0.56
DDX11-227ENST00000544652 PITX2Q99697 317 aa11.54□□□□□ -0.56
DDX11-227ENST00000544652 OPN3Q9H1Y3 402 aaPredicted RBP11.54□□□□□ -0.56
DDX11-227ENST00000544652 VCXQ9H320 206 aa11.54□□□□□ -0.56
DDX11-227ENST00000544652 VCX3BQ9H321 246 aa11.54□□□□□ -0.56
DDX11-227ENST00000544652 RIBC2Q9H4K1 309 aa11.54□□□□□ -0.56
DDX11-227ENST00000544652 KLHL21Q9UJP4 597 aa11.54□□□□□ -0.56
DDX11-227ENST00000544652 RELNP78509 3460 aa11.53□□□□□ -0.56
DDX11-227ENST00000544652 SLC22A23A1A5C7 686 aa11.53□□□□□ -0.56
DDX11-227ENST00000544652 XKRYO14609 159 aa11.53□□□□□ -0.56
DDX11-227ENST00000544652 SMNDC1O75940 238 aaKnown RBP eCLIP11.53□□□□□ -0.56
DDX11-227ENST00000544652 NR2C1P13056 603 aa11.53□□□□□ -0.56
DDX11-227ENST00000544652 COX5AP20674 150 aa11.53□□□□□ -0.56
DDX11-227ENST00000544652 ASCL1P50553 236 aa11.53□□□□□ -0.56
DDX11-227ENST00000544652 CLRN1P58418 232 aa11.53□□□□□ -0.56
DDX11-227ENST00000544652 THEM4Q5T1C6 240 aa11.53□□□□□ -0.56
DDX11-227ENST00000544652 SLC35F1Q5T1Q4 408 aa11.53□□□□□ -0.56
DDX11-227ENST00000544652 C10orf128Q5T292 105 aa11.53□□□□□ -0.56
DDX11-227ENST00000544652 CARD17Q5XLA6 110 aa11.53□□□□□ -0.56
DDX11-227ENST00000544652 LRFN4Q6PJG9 635 aa11.53□□□□□ -0.56
DDX11-227ENST00000544652 SLC25A47Q6Q0C1 308 aa11.53□□□□□ -0.56
DDX11-227ENST00000544652 ABHD12BQ7Z5M8 362 aaPredicted RBP11.53□□□□□ -0.56
DDX11-227ENST00000544652 GPR137CQ8N3F9 429 aa11.53□□□□□ -0.56
DDX11-227ENST00000544652 SLC37A3Q8NCC5 494 aa11.53□□□□□ -0.56
DDX11-227ENST00000544652 OR52E2Q8NGJ4 325 aa11.53□□□□□ -0.56
DDX11-227ENST00000544652 OR6N1Q8NGY5 312 aa11.53□□□□□ -0.56
DDX11-227ENST00000544652 OR4K13Q8NH42 304 aa11.53□□□□□ -0.56
DDX11-227ENST00000544652 MCHR2Q969V1 340 aa11.53□□□□□ -0.56
DDX11-227ENST00000544652 BOD1Q96IK1 185 aa11.53□□□□□ -0.56
DDX11-227ENST00000544652 NMNAT3Q96T66 252 aa11.53□□□□□ -0.56
DDX11-227ENST00000544652 TEX12Q9BXU0 123 aa11.53□□□□□ -0.56
DDX11-227ENST00000544652 GPR35Q9HC97 309 aa11.53□□□□□ -0.56
DDX11-227ENST00000544652 FAM118AQ9NWS6 357 aa11.53□□□□□ -0.56
DDX11-227ENST00000544652 ASB6Q9NWX5 421 aa11.53□□□□□ -0.56
DDX11-227ENST00000544652 ELOVL5Q9NYP7 299 aa11.53□□□□□ -0.56
DDX11-227ENST00000544652 UPB1Q9UBR1 384 aa11.53□□□□□ -0.56
DDX11-227ENST00000544652 NDRG4Q9ULP0 352 aaKnown RBP11.53□□□□□ -0.56
DDX11-227ENST00000544652 IGKV1D-43A0A0B4J1Z2 117 aa11.52□□□□□ -0.57
DDX11-227ENST00000544652 LOC100130705A0A1B0GUX0 176 aa11.52□□□□□ -0.57
DDX11-227ENST00000544652 OR6C68A6NDL8 312 aa11.52□□□□□ -0.57
DDX11-227ENST00000544652 EEF1E1-BLOC1S5C9J1V9 151 aa11.52□□□□□ -0.57
DDX11-227ENST00000544652 M0R3G1 203 aa11.52□□□□□ -0.57
DDX11-227ENST00000544652 EEF1E1O43324 174 aaKnown RBP11.52□□□□□ -0.57
DDX11-227ENST00000544652 CLDN14O95500 239 aa11.52□□□□□ -0.57
DDX11-227ENST00000544652 SLC2A10O95528 541 aa11.52□□□□□ -0.57
DDX11-227ENST00000544652 IFNGP01579 166 aa11.52□□□□□ -0.57
DDX11-227ENST00000544652 IGHV3-9P01782 118 aa11.52□□□□□ -0.57
DDX11-227ENST00000544652 ITGA5P08648 1049 aa11.52□□□□□ -0.57
DDX11-227ENST00000544652 QDPRP09417 244 aa11.52□□□□□ -0.57
DDX11-227ENST00000544652 IGHV1-2P23083 117 aa11.52□□□□□ -0.57
DDX11-227ENST00000544652 GGT2P36268 569 aa11.52□□□□□ -0.57
DDX11-227ENST00000544652 ADARB1P78563 741 aaKnown RBP11.52□□□□□ -0.57
DDX11-227ENST00000544652 TFF3Q07654 80 aa11.52□□□□□ -0.57
DDX11-227ENST00000544652 FAPQ12884 760 aa11.52□□□□□ -0.57
DDX11-227ENST00000544652 ITGADQ13349 1161 aa11.52□□□□□ -0.57
DDX11-227ENST00000544652 KEAP1Q14145 624 aa11.52□□□□□ -0.57
DDX11-227ENST00000544652 P2RY6Q15077 328 aa11.52□□□□□ -0.57
DDX11-227ENST00000544652 LEG1Q6P5S2 330 aa11.52□□□□□ -0.57
DDX11-227ENST00000544652 ZNF627Q7L945 461 aa11.52□□□□□ -0.57
DDX11-227ENST00000544652 LUZP2Q86TE4 346 aa11.52□□□□□ -0.57
DDX11-227ENST00000544652 JAZF1Q86VZ6 243 aa11.52□□□□□ -0.57
DDX11-227ENST00000544652 FAM26EQ8N5C1 309 aa11.52□□□□□ -0.57
DDX11-227ENST00000544652 SYT14Q8NB59 555 aa11.52□□□□□ -0.57
DDX11-227ENST00000544652 SDR9C7Q8NEX9 313 aa11.52□□□□□ -0.57
DDX11-227ENST00000544652 CA5BP1Q8WTZ4 195 aa11.52□□□□□ -0.57
DDX11-227ENST00000544652 ALKBH3Q96Q83 286 aaPredicted RBP11.52□□□□□ -0.57
DDX11-227ENST00000544652 SLC38A2Q96QD8 506 aa11.52□□□□□ -0.57
DDX11-227ENST00000544652 RBP7Q96R05 134 aa11.52□□□□□ -0.57
DDX11-227ENST00000544652 PRRG3Q9BZD7 231 aa11.52□□□□□ -0.57
DDX11-227ENST00000544652 ULBP2Q9BZM5 246 aa11.52□□□□□ -0.57
DDX11-227ENST00000544652 NMNAT2Q9BZQ4 307 aa11.52□□□□□ -0.57
DDX11-227ENST00000544652 SYT4Q9H2B2 425 aa11.52□□□□□ -0.57
DDX11-227ENST00000544652 FN3KQ9H479 309 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms