RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 OR2A25A4D2G3 310 aa11.74□□□□□ -0.53
CHD4-211ENST00000544484 BCL2A1Q16548 175 aa11.74□□□□□ -0.53
CHD4-211ENST00000544484 CTU2Q2VPK5 515 aaKnown RBP11.74□□□□□ -0.53
CHD4-211ENST00000544484 CELF2-AS1Q8N7Q2 184 aa11.74□□□□□ -0.53
CHD4-211ENST00000544484 C16orf52Q8NHV5 167 aa11.74□□□□□ -0.53
CHD4-211ENST00000544484 HRH4Q9H3N8 390 aa11.74□□□□□ -0.53
CHD4-211ENST00000544484 HINT3Q9NQE9 182 aaKnown RBP11.74□□□□□ -0.53
CHD4-211ENST00000544484 CHRNA9Q9UGM1 479 aa11.74□□□□□ -0.53
CHD4-211ENST00000544484 RPA2P15927 270 aa11.74□□□□□ -0.53
CHD4-211ENST00000544484 SRMP19623 302 aa11.74□□□□□ -0.53
CHD4-211ENST00000544484 CCR6P51684 374 aa11.74□□□□□ -0.53
CHD4-211ENST00000544484 RAB5BP61020 215 aa11.74□□□□□ -0.53
CHD4-211ENST00000544484 RPL27P61353 136 aaKnown RBP11.74□□□□□ -0.53
CHD4-211ENST00000544484 DYRK1AQ13627 763 aa11.74□□□□□ -0.53
CHD4-211ENST00000544484 SYT6Q5T7P8 510 aaPredicted RBP11.74□□□□□ -0.53
CHD4-211ENST00000544484 CORO6Q6QEF8 472 aa11.74□□□□□ -0.53
CHD4-211ENST00000544484 SMAP2Q8WU79 429 aaPredicted RBP11.74□□□□□ -0.53
CHD4-211ENST00000544484 FAM3DQ96BQ1 224 aa11.74□□□□□ -0.53
CHD4-211ENST00000544484 NHSL1Q5SYE7 1610 aa11.74□□□□□ -0.53
CHD4-211ENST00000544484 SHROOM3Q8TF72 1996 aa11.74□□□□□ -0.53
CHD4-211ENST00000544484 ANKRD61A6NGH8 418 aa11.74□□□□□ -0.53
CHD4-211ENST00000544484 KLK8O60259 260 aa11.74□□□□□ -0.53
CHD4-211ENST00000544484 NSA2O95478 260 aaKnown RBP11.74□□□□□ -0.53
CHD4-211ENST00000544484 RPS19P39019 145 aaKnown RBP11.74□□□□□ -0.53
CHD4-211ENST00000544484 ALDH3B1P43353 468 aa11.74□□□□□ -0.53
CHD4-211ENST00000544484 ZNF674Q2M3X9 581 aa11.74□□□□□ -0.53
CHD4-211ENST00000544484 C6orf15Q6UXA7 325 aaPredicted RBP11.74□□□□□ -0.53
CHD4-211ENST00000544484 SIAH3Q8IW03 269 aa11.74□□□□□ -0.53
CHD4-211ENST00000544484 CA13Q8N1Q1 262 aa11.74□□□□□ -0.53
CHD4-211ENST00000544484 SLC22A24Q8N4F4 322 aa11.74□□□□□ -0.53
CHD4-211ENST00000544484 BBS1Q8NFJ9 593 aa11.74□□□□□ -0.53
CHD4-211ENST00000544484 SGK3Q96BR1 496 aa11.74□□□□□ -0.53
CHD4-211ENST00000544484 ZC3HAV1LQ96H79 300 aaKnown RBP11.74□□□□□ -0.53
CHD4-211ENST00000544484 FAM234AQ9H0X4 552 aa11.74□□□□□ -0.53
CHD4-211ENST00000544484 UNKLQ9H9P5 680 aaKnown RBP11.74□□□□□ -0.53
CHD4-211ENST00000544484 EIF4E2O60573 245 aaKnown RBP11.74□□□□□ -0.53
CHD4-211ENST00000544484 GABARAPO95166 117 aa11.74□□□□□ -0.53
CHD4-211ENST00000544484 ITGB2P05107 769 aa11.74□□□□□ -0.53
CHD4-211ENST00000544484 MSL3P1P0C860 447 aa11.74□□□□□ -0.53
CHD4-211ENST00000544484 HIST1H1CP16403 213 aaKnown RBP11.74□□□□□ -0.53
CHD4-211ENST00000544484 SMAD4Q13485 552 aaKnown RBP11.74□□□□□ -0.53
CHD4-211ENST00000544484 SFRP5Q5T4F7 317 aa11.74□□□□□ -0.53
CHD4-211ENST00000544484 HACD4Q5VWC8 232 aa11.74□□□□□ -0.53
CHD4-211ENST00000544484 LIPNQ5VXI9 398 aa11.74□□□□□ -0.53
CHD4-211ENST00000544484 SLCO4A1Q96BD0 722 aa11.74□□□□□ -0.53
CHD4-211ENST00000544484 MBOAT4Q96T53 435 aa11.74□□□□□ -0.53
CHD4-211ENST00000544484 SAV1Q9H4B6 383 aaPredicted RBP11.74□□□□□ -0.53
CHD4-211ENST00000544484 GPR55Q9Y2T6 319 aaPredicted RBP11.74□□□□□ -0.53
CHD4-211ENST00000544484 IGHV3-64DA0A0J9YX35 117 aa11.74□□□□□ -0.53
CHD4-211ENST00000544484 MT-CO2P00403 227 aa11.74□□□□□ -0.53
CHD4-211ENST00000544484 SBK2P0C263 348 aa11.74□□□□□ -0.53
CHD4-211ENST00000544484 PCSK6P29122 969 aa11.74□□□□□ -0.53
CHD4-211ENST00000544484 SNRPGP62308 76 aaKnown RBP11.74□□□□□ -0.53
CHD4-211ENST00000544484 OR52W1Q6IF63 320 aa11.74□□□□□ -0.53
CHD4-211ENST00000544484 OR52N1Q8NH53 320 aa11.74□□□□□ -0.53
CHD4-211ENST00000544484 KNTC1P50748 2209 aa11.74□□□□□ -0.53
CHD4-211ENST00000544484 ARGFXA6NJG6 315 aa11.73□□□□□ -0.53
CHD4-211ENST00000544484 UPK1AO00322 258 aa11.73□□□□□ -0.53
CHD4-211ENST00000544484 ICOSLGO75144 302 aa11.73□□□□□ -0.53
CHD4-211ENST00000544484 STK17BO94768 372 aa11.73□□□□□ -0.53
CHD4-211ENST00000544484 TSPAN12O95859 305 aa11.73□□□□□ -0.53
CHD4-211ENST00000544484 UBCP0CG48 685 aaKnown RBP11.73□□□□□ -0.53
CHD4-211ENST00000544484 YIF1BQ5BJH7 314 aa11.73□□□□□ -0.53
CHD4-211ENST00000544484 SH2D5Q6ZV89 423 aa11.73□□□□□ -0.53
CHD4-211ENST00000544484 CCDC71Q8IV32 467 aaPredicted RBP11.73□□□□□ -0.53
CHD4-211ENST00000544484 LIPHQ8WWY8 451 aa11.73□□□□□ -0.53
CHD4-211ENST00000544484 FKRPQ9H9S5 495 aa11.73□□□□□ -0.53
CHD4-211ENST00000544484 KCNJ16Q9NPI9 418 aa11.73□□□□□ -0.53
CHD4-211ENST00000544484 RPS10P5Q9NQ39 176 aa11.73□□□□□ -0.53
CHD4-211ENST00000544484 COPS3Q9UNS2 423 aa11.73□□□□□ -0.53
CHD4-211ENST00000544484 PIGLQ9Y2B2 252 aa11.73□□□□□ -0.53
CHD4-211ENST00000544484 LRP5O75197 1615 aa11.73□□□□□ -0.53
CHD4-211ENST00000544484 EFSO43281 561 aa11.73□□□□□ -0.53
CHD4-211ENST00000544484 NXPH2O95156 264 aa11.73□□□□□ -0.53
CHD4-211ENST00000544484 PMP2P02689 132 aa11.73□□□□□ -0.53
CHD4-211ENST00000544484 RUNX2Q13950 521 aa11.73□□□□□ -0.53
CHD4-211ENST00000544484 LHX6Q9UPM6 363 aa11.73□□□□□ -0.53
CHD4-211ENST00000544484 HRH3Q9Y5N1 445 aa11.73□□□□□ -0.53
CHD4-211ENST00000544484 NHSQ6T4R5 1651 aa11.73□□□□□ -0.53
CHD4-211ENST00000544484 GPR171O14626 319 aa11.73□□□□□ -0.53
CHD4-211ENST00000544484 UBL3O95164 117 aa11.73□□□□□ -0.53
CHD4-211ENST00000544484 PAPLNO95428 1278 aa11.73□□□□□ -0.53
CHD4-211ENST00000544484 MT-ATP6P00846 226 aa11.73□□□□□ -0.53
CHD4-211ENST00000544484 CAPZBP47756 277 aa11.73□□□□□ -0.53
CHD4-211ENST00000544484 MRPL19P49406 292 aaKnown RBP11.73□□□□□ -0.53
CHD4-211ENST00000544484 ANGPTL5Q86XS5 388 aa11.73□□□□□ -0.53
CHD4-211ENST00000544484 CSF3RQ99062 836 aa11.73□□□□□ -0.53
CHD4-211ENST00000544484 RPP25Q9BUL9 199 aaKnown RBP11.73□□□□□ -0.53
CHD4-211ENST00000544484 C11orf54Q9H0W9 315 aaPredicted RBP11.73□□□□□ -0.53
CHD4-211ENST00000544484 DEFB127Q9H1M4 99 aa11.73□□□□□ -0.53
CHD4-211ENST00000544484 COL18A1P39060 1754 aa11.73□□□□□ -0.53
CHD4-211ENST00000544484 TRDV1A0A1B0GX56 115 aa11.73□□□□□ -0.53
CHD4-211ENST00000544484 PTAFRP25105 342 aa11.73□□□□□ -0.53
CHD4-211ENST00000544484 GJC3Q8NFK1 279 aa11.73□□□□□ -0.53
CHD4-211ENST00000544484 TSSK2Q96PF2 358 aa11.73□□□□□ -0.53
CHD4-211ENST00000544484 USB1Q9BQ65 265 aaKnown RBP11.73□□□□□ -0.53
CHD4-211ENST00000544484 BANF2Q9H503 90 aa11.73□□□□□ -0.53
CHD4-211ENST00000544484 LANCL2Q9NS86 450 aa11.73□□□□□ -0.53
CHD4-211ENST00000544484 RBFOX1Q9NWB1 397 aaKnown RBP11.73□□□□□ -0.53
CHD4-211ENST00000544484 SCN7AQ01118 1682 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms