RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 PPP1R8Q12972 351 aaKnown RBP16.7■□□□□ 0.26
DDX55-211ENST00000544429 CCNIQ14094 377 aa16.7■□□□□ 0.26
DDX55-211ENST00000544429 C3orf36Q3SXR2 165 aa16.7■□□□□ 0.26
DDX55-211ENST00000544429 ADAM5Q6NVV9 412 aa16.7■□□□□ 0.26
DDX55-211ENST00000544429 SMARCD3Q6STE5 483 aa16.7■□□□□ 0.26
DDX55-211ENST00000544429 DPY19L2P2Q6ZN68 376 aa16.7■□□□□ 0.26
DDX55-211ENST00000544429 ZNF620Q6ZNG0 422 aa16.7■□□□□ 0.26
DDX55-211ENST00000544429 LILRB1Q8NHL6 650 aaPredicted RBP16.7■□□□□ 0.26
DDX55-211ENST00000544429 NRGNQ92686 78 aa16.7■□□□□ 0.26
DDX55-211ENST00000544429 FOXB1Q99853 325 aa16.7■□□□□ 0.26
DDX55-211ENST00000544429 DGCR6LQ9BY27 220 aa16.7■□□□□ 0.26
DDX55-211ENST00000544429 LIME1Q9H400 295 aa16.7■□□□□ 0.26
DDX55-211ENST00000544429 B3GNT2Q9NY97 397 aa16.7■□□□□ 0.26
DDX55-211ENST00000544429 ZNF224Q9NZL3 707 aa16.7■□□□□ 0.26
DDX55-211ENST00000544429 U3KQV3 271 aa16.7■□□□□ 0.26
DDX55-211ENST00000544429 A6NIZ1 184 aa16.69■□□□□ 0.26
DDX55-211ENST00000544429 CCNB2O95067 398 aa16.69■□□□□ 0.26
DDX55-211ENST00000544429 WNT11O96014 354 aa16.69■□□□□ 0.26
DDX55-211ENST00000544429 PLAUP00749 431 aa16.69■□□□□ 0.26
DDX55-211ENST00000544429 GASTP01350 101 aa16.69■□□□□ 0.26
DDX55-211ENST00000544429 IGLV1-44P01699 117 aa16.69■□□□□ 0.26
DDX55-211ENST00000544429 ACVR1BP36896 505 aa16.69■□□□□ 0.26
DDX55-211ENST00000544429 RAP1BP61224 184 aa16.69■□□□□ 0.26
DDX55-211ENST00000544429 RAP1AP62834 184 aa16.69■□□□□ 0.26
DDX55-211ENST00000544429 ERVK-25P63136 954 aa16.69■□□□□ 0.26
DDX55-211ENST00000544429 TOP3AQ13472 1001 aaPredicted RBP16.69■□□□□ 0.26
DDX55-211ENST00000544429 RFX4Q33E94 735 aa16.69■□□□□ 0.26
DDX55-211ENST00000544429 NRN1LQ496H8 165 aa16.69■□□□□ 0.26
DDX55-211ENST00000544429 MESTQ5EB52 335 aa16.69■□□□□ 0.26
DDX55-211ENST00000544429 GPR139Q6DWJ6 353 aa16.69■□□□□ 0.26
DDX55-211ENST00000544429 SLC25A47Q6Q0C1 308 aa16.69■□□□□ 0.26
DDX55-211ENST00000544429 TMEM179BQ7Z7N9 219 aa16.69■□□□□ 0.26
DDX55-211ENST00000544429 CCDC36Q8IYA8 594 aa16.69■□□□□ 0.26
DDX55-211ENST00000544429 SYT14Q8NB59 555 aa16.69■□□□□ 0.26
DDX55-211ENST00000544429 Q96M85 177 aa16.69■□□□□ 0.26
DDX55-211ENST00000544429 OR52D1Q9H346 318 aa16.69■□□□□ 0.26
DDX55-211ENST00000544429 TMEM38BQ9NVV0 291 aa16.69■□□□□ 0.26
DDX55-211ENST00000544429 UGT2A1Q9Y4X1 527 aa16.69■□□□□ 0.26
DDX55-211ENST00000544429 IGKV1D-43A0A0B4J1Z2 117 aa16.68■□□□□ 0.26
DDX55-211ENST00000544429 AHCYL1O43865 530 aa16.68■□□□□ 0.26
DDX55-211ENST00000544429 SEC14L2O76054 403 aa16.68■□□□□ 0.26
DDX55-211ENST00000544429 IGKV3-15P01624 115 aa16.68■□□□□ 0.26
DDX55-211ENST00000544429 PTAFRP25105 342 aa16.68■□□□□ 0.26
DDX55-211ENST00000544429 CD40P25942 277 aa16.68■□□□□ 0.26
DDX55-211ENST00000544429 SDHAP31040 664 aa16.68■□□□□ 0.26
DDX55-211ENST00000544429 HOXC12P31275 282 aa16.68■□□□□ 0.26
DDX55-211ENST00000544429 RPL4P36578 427 aaKnown RBP16.68■□□□□ 0.26
DDX55-211ENST00000544429 ERFP50548 548 aa16.68■□□□□ 0.26
DDX55-211ENST00000544429 IST1P53990 364 aa16.68■□□□□ 0.26
DDX55-211ENST00000544429 THEM4Q5T1C6 240 aa16.68■□□□□ 0.26
DDX55-211ENST00000544429 C1orf146Q5VVC0 180 aa16.68■□□□□ 0.26
DDX55-211ENST00000544429 FBXW10Q5XX13 1052 aa16.68■□□□□ 0.26
DDX55-211ENST00000544429 ALKBH2Q6NS38 261 aa16.68■□□□□ 0.26
DDX55-211ENST00000544429 TMEM108Q6UXF1 575 aa16.68■□□□□ 0.26
DDX55-211ENST00000544429 CD300LDQ6UXZ3 194 aa16.68■□□□□ 0.26
DDX55-211ENST00000544429 ZNF704Q6ZNC4 412 aaPredicted RBP16.68■□□□□ 0.26
DDX55-211ENST00000544429 CLDN22Q8N7P3 220 aa16.68■□□□□ 0.26
DDX55-211ENST00000544429 FANK1Q8TC84 345 aa16.68■□□□□ 0.26
DDX55-211ENST00000544429 FNDC8Q8TC99 324 aa16.68■□□□□ 0.26
DDX55-211ENST00000544429 ZNF75AQ96N20 296 aa16.68■□□□□ 0.26
DDX55-211ENST00000544429 NDEL1Q9GZM8 345 aa16.68■□□□□ 0.26
DDX55-211ENST00000544429 YY1AP1Q9H869 796 aa16.68■□□□□ 0.26
DDX55-211ENST00000544429 NTN4Q9HB63 628 aa16.68■□□□□ 0.26
DDX55-211ENST00000544429 MOV10Q9HCE1 1003 aaKnown RBP16.68■□□□□ 0.26
DDX55-211ENST00000544429 ARMC1Q9NVT9 282 aa16.68■□□□□ 0.26
DDX55-211ENST00000544429 IL20Q9NYY1 176 aa16.68■□□□□ 0.26
DDX55-211ENST00000544429 DNAJB9Q9UBS3 223 aa16.68■□□□□ 0.26
DDX55-211ENST00000544429 IL20RAQ9UHF4 553 aa16.68■□□□□ 0.26
DDX55-211ENST00000544429 POFUT2Q9Y2G5 429 aa16.68■□□□□ 0.26
DDX55-211ENST00000544429 RNF115Q9Y4L5 304 aa16.68■□□□□ 0.26
DDX55-211ENST00000544429 DSCAMO60469 2012 aa16.68■□□□□ 0.26
DDX55-211ENST00000544429 ARPC3O15145 178 aa16.67■□□□□ 0.26
DDX55-211ENST00000544429 TP53P04637 393 aaPredicted RBP16.67■□□□□ 0.26
DDX55-211ENST00000544429 NR2C1P13056 603 aa16.67■□□□□ 0.26
DDX55-211ENST00000544429 B4GALT1P15291 398 aa16.67■□□□□ 0.26
DDX55-211ENST00000544429 ZNF83P51522 516 aa16.67■□□□□ 0.26
DDX55-211ENST00000544429 UBE2NP61088 152 aaKnown RBP16.67■□□□□ 0.26
DDX55-211ENST00000544429 MYBPC1Q00872 1141 aa16.67■□□□□ 0.26
DDX55-211ENST00000544429 FMODQ06828 376 aa16.67■□□□□ 0.26
DDX55-211ENST00000544429 KLHL17Q6TDP4 642 aa16.67■□□□□ 0.26
DDX55-211ENST00000544429 KLHL24Q6TFL4 600 aa16.67■□□□□ 0.26
DDX55-211ENST00000544429 PAMR1Q6UXH9 720 aa16.67■□□□□ 0.26
DDX55-211ENST00000544429 ZNF813Q6ZN06 617 aa16.67■□□□□ 0.26
DDX55-211ENST00000544429 FOXL2NBQ6ZUU3 175 aa16.67■□□□□ 0.26
DDX55-211ENST00000544429 CDH24Q86UP0 819 aa16.67■□□□□ 0.26
DDX55-211ENST00000544429 AQP11Q8NBQ7 271 aa16.67■□□□□ 0.26
DDX55-211ENST00000544429 IGFBPL1Q8WX77 278 aa16.67■□□□□ 0.26
DDX55-211ENST00000544429 GRHPRQ9UBQ7 328 aa16.67■□□□□ 0.26
DDX55-211ENST00000544429 ST6GALNAC2Q9UJ37 374 aa16.67■□□□□ 0.26
DDX55-211ENST00000544429 MGAT4BQ9UQ53 548 aa16.67■□□□□ 0.26
DDX55-211ENST00000544429 CCDC168Q8NDH2 2452 aa16.67■□□□□ 0.26
DDX55-211ENST00000544429 MYO9AB2RTY4 2548 aa16.66■□□□□ 0.26
DDX55-211ENST00000544429 SLC22A23A1A5C7 686 aa16.66■□□□□ 0.26
DDX55-211ENST00000544429 SHISA9B4DS77 424 aa16.66■□□□□ 0.26
DDX55-211ENST00000544429 IMPA2O14732 288 aa16.66■□□□□ 0.26
DDX55-211ENST00000544429 MGRN1O60291 552 aa16.66■□□□□ 0.26
DDX55-211ENST00000544429 SLC2A10O95528 541 aa16.66■□□□□ 0.26
DDX55-211ENST00000544429 CD3EP07766 207 aa16.66■□□□□ 0.26
DDX55-211ENST00000544429 CBR1P16152 277 aa16.66■□□□□ 0.26
DDX55-211ENST00000544429 RASSF6Q6ZTQ3 369 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms