RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	DHH	O43323	396 aa		8.96	□□□□□ -0.98
CPSF7-221	ENST00000543545	AHCYL1	O43865	530 aa		8.96	□□□□□ -0.98
CPSF7-221	ENST00000543545	SLC16A7	O60669	478 aa		8.96	□□□□□ -0.98
CPSF7-221	ENST00000543545	SLC2A10	O95528	541 aa		8.96	□□□□□ -0.98
CPSF7-221	ENST00000543545	CNOT4	O95628	575 aa	Known RBP	8.96	□□□□□ -0.98
CPSF7-221	ENST00000543545	PAICS	P22234	425 aa	Known RBP	8.96	□□□□□ -0.98
CPSF7-221	ENST00000543545	IL32	P24001	234 aa		8.96	□□□□□ -0.98
CPSF7-221	ENST00000543545	MPG	P29372	298 aa		8.96	□□□□□ -0.98
CPSF7-221	ENST00000543545	ZNF84	P51523	738 aa		8.96	□□□□□ -0.98
CPSF7-221	ENST00000543545	CDC42	P60953	191 aa		8.96	□□□□□ -0.98
CPSF7-221	ENST00000543545	TGFBR3	Q03167	851 aa		8.96	□□□□□ -0.98
CPSF7-221	ENST00000543545	FAM27E3	Q08E93	113 aa		8.96	□□□□□ -0.98
CPSF7-221	ENST00000543545	P2RY6	Q15077	328 aa		8.96	□□□□□ -0.98
CPSF7-221	ENST00000543545	SNCB	Q16143	134 aa		8.96	□□□□□ -0.98
CPSF7-221	ENST00000543545	CEACAM16	Q2WEN9	425 aa		8.96	□□□□□ -0.98
CPSF7-221	ENST00000543545	PHYHD1	Q5SRE7	291 aa		8.96	□□□□□ -0.98
CPSF7-221	ENST00000543545	THEM4	Q5T1C6	240 aa		8.96	□□□□□ -0.98
CPSF7-221	ENST00000543545	SLX4IP	Q5VYV7	408 aa		8.96	□□□□□ -0.98
CPSF7-221	ENST00000543545		Q6ZT83	130 aa		8.96	□□□□□ -0.98
CPSF7-221	ENST00000543545	PTCHD4	Q6ZW05	846 aa		8.96	□□□□□ -0.98
CPSF7-221	ENST00000543545	CXorf67	Q86X51	503 aa	Predicted RBP	8.96	□□□□□ -0.98
CPSF7-221	ENST00000543545	CYB561A3	Q8NBI2	242 aa		8.96	□□□□□ -0.98
CPSF7-221	ENST00000543545	SLC37A3	Q8NCC5	494 aa		8.96	□□□□□ -0.98
CPSF7-221	ENST00000543545	FNDC8	Q8TC99	324 aa		8.96	□□□□□ -0.98
CPSF7-221	ENST00000543545	SSC4D	Q8WTU2	575 aa		8.96	□□□□□ -0.98
CPSF7-221	ENST00000543545	KISS1R	Q969F8	398 aa	Predicted RBP	8.96	□□□□□ -0.98
CPSF7-221	ENST00000543545	RDH12	Q96NR8	316 aa		8.96	□□□□□ -0.98
CPSF7-221	ENST00000543545	KCNK17	Q96T54	332 aa		8.96	□□□□□ -0.98
CPSF7-221	ENST00000543545	MRPL13	Q9BYD1	178 aa	Known RBP	8.96	□□□□□ -0.98
CPSF7-221	ENST00000543545	GRIP2	Q9C0E4	1043 aa		8.96	□□□□□ -0.98
CPSF7-221	ENST00000543545	SYT4	Q9H2B2	425 aa		8.96	□□□□□ -0.98
CPSF7-221	ENST00000543545	SEC61A2	Q9H9S3	476 aa		8.96	□□□□□ -0.98
CPSF7-221	ENST00000543545	GPR35	Q9HC97	309 aa		8.96	□□□□□ -0.98
CPSF7-221	ENST00000543545	SRA1	Q9HD15	236 aa	Known RBP	8.96	□□□□□ -0.98
CPSF7-221	ENST00000543545	RPRD1B	Q9NQG5	326 aa	Known RBP	8.96	□□□□□ -0.98
CPSF7-221	ENST00000543545	IMPAD1	Q9NX62	359 aa		8.96	□□□□□ -0.98
CPSF7-221	ENST00000543545	ELOVL5	Q9NYP7	299 aa		8.96	□□□□□ -0.98
CPSF7-221	ENST00000543545	GMPPB	Q9Y5P6	360 aa		8.96	□□□□□ -0.98
CPSF7-221	ENST00000543545	LOC100130705	A0A1B0GUX0	176 aa		8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545		A0A1W2PPL8	197 aa		8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	ZAR1L	A6NP61	321 aa		8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	FAM171A2	A8MVW0	826 aa		8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	PRR23D1	E9PI22	279 aa	Predicted RBP	8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	C16orf97	H3BN30	126 aa		8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	SURF4	O15260	269 aa		8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	TLX2	O43763	284 aa	Predicted RBP	8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	KHDRBS3	O75525	346 aa	Known RBP	8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	LYZL6	O75951	148 aa		8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	PRR23D2	P0DMB1	279 aa	Predicted RBP	8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	IGHV1-2	P23083	117 aa		8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	CRABP1	P29762	137 aa		8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	CD79B	P40259	229 aa		8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	VHL	P40337	213 aa		8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	FOXG1	P55316	489 aa	Predicted RBP	8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	ARF1	P84077	181 aa	Known RBP	8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	FMOD	Q06828	376 aa		8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	CRMP1	Q14194	572 aa		8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	CDSN	Q15517	529 aa		8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	TSC22D1	Q15714	1073 aa		8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	SGCA	Q16586	387 aa		8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	ALKBH2	Q6NS38	261 aa		8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	LRFN4	Q6PJG9	635 aa		8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	DNM1P34	Q6PK57	102 aa		8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	LINGO2	Q7L985	606 aa		8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	BHLHA15	Q7RTS1	189 aa	Predicted RBP	8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	GABRG1	Q8N1C3	465 aa		8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	DHRSX	Q8N5I4	330 aa		8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	TCEANC	Q8N8B7	351 aa		8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	PROKR2	Q8NFJ6	384 aa		8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	OR9Q1	Q8NGQ5	310 aa		8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	FAM81A	Q8TBF8	368 aa		8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	RNASE6	Q93091	150 aa	Known RBP	8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	TSSK2	Q96PF2	358 aa		8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	IL4I1	Q96RQ9	567 aa		8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	MBOAT4	Q96T53	435 aa		8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	HDHD5	Q9BXW7	423 aa		8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	NUAK2	Q9H093	628 aa		8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	OR51V1	Q9H2C8	321 aa		8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	FN3K	Q9H479	309 aa		8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	CMC2	Q9NRP2	79 aa		8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	FAM118A	Q9NWS6	357 aa		8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	GALNT8	Q9NY28	637 aa		8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	TAS2R16	Q9NYV7	291 aa		8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	VSX1	Q9NZR4	365 aa	Predicted RBP	8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	JKAMP	Q9P055	326 aa		8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	H2AFY2	Q9P0M6	372 aa	Predicted RBP	8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	MALT1	Q9UDY8	824 aa		8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	FOXD3	Q9UJU5	478 aa	Predicted RBP	8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545	GPR52	Q9Y2T5	361 aa		8.95	□□□□□ -0.98
CPSF7-221	ENST00000543545		A0A096LPE4	126 aa		8.94	□□□□□ -0.98
CPSF7-221	ENST00000543545		A0A1W2PPZ6	126 aa		8.94	□□□□□ -0.98
CPSF7-221	ENST00000543545	OR6C68	A6NDL8	312 aa		8.94	□□□□□ -0.98
CPSF7-221	ENST00000543545	FAM183A	A6NL82	134 aa		8.94	□□□□□ -0.98
CPSF7-221	ENST00000543545		M0R129	80 aa		8.94	□□□□□ -0.98
CPSF7-221	ENST00000543545	RAD51D	O75771	328 aa		8.94	□□□□□ -0.98
CPSF7-221	ENST00000543545	SEC14L2	O76054	403 aa		8.94	□□□□□ -0.98
CPSF7-221	ENST00000543545	HLA-DQA2	P01906	255 aa		8.94	□□□□□ -0.98
CPSF7-221	ENST00000543545	HOXC12	P31275	282 aa		8.94	□□□□□ -0.98
CPSF7-221	ENST00000543545	GGT2	P36268	569 aa		8.94	□□□□□ -0.98
CPSF7-221	ENST00000543545	CAPZA2	P47755	286 aa		8.94	□□□□□ -0.98

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms