RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 FLRT2O43155 660 aa13.03□□□□□ -0.32
SFSWAP-210ENST00000541286 RLN2P04090 185 aa13.03□□□□□ -0.32
SFSWAP-210ENST00000541286 ZNF806P0C7X5 589 aa13.03□□□□□ -0.32
SFSWAP-210ENST00000541286 CAPZA2P47755 286 aa13.03□□□□□ -0.32
SFSWAP-210ENST00000541286 OR1D4P47884 311 aa13.03□□□□□ -0.32
SFSWAP-210ENST00000541286 ATXN7L3Q14CW9 347 aaPredicted RBP13.03□□□□□ -0.32
SFSWAP-210ENST00000541286 C19orf47Q8N9M1 422 aaKnown RBP13.03□□□□□ -0.32
SFSWAP-210ENST00000541286 SLC38A9Q8NBW4 561 aa13.03□□□□□ -0.32
SFSWAP-210ENST00000541286 BAHD1Q8TBE0 780 aaPredicted RBP13.03□□□□□ -0.32
SFSWAP-210ENST00000541286 TIMP4Q99727 224 aa13.03□□□□□ -0.32
SFSWAP-210ENST00000541286 GAL3ST1Q99999 423 aa13.03□□□□□ -0.32
SFSWAP-210ENST00000541286 ANKRD11Q6UB99 2663 aaPredicted RBP13.02□□□□□ -0.32
SFSWAP-210ENST00000541286 MEIS3P1A6NDR6 274 aa13.02□□□□□ -0.32
SFSWAP-210ENST00000541286 TMEM150CB9EJG8 249 aa13.02□□□□□ -0.32
SFSWAP-210ENST00000541286 H7C2Y5 167 aa13.02□□□□□ -0.32
SFSWAP-210ENST00000541286 KLF4O43474 513 aa13.02□□□□□ -0.32
SFSWAP-210ENST00000541286 NDUFS6O75380 124 aaKnown RBP13.02□□□□□ -0.32
SFSWAP-210ENST00000541286 PGDP52209 483 aa13.02□□□□□ -0.32
SFSWAP-210ENST00000541286 EEF1A1P68104 462 aaKnown RBP13.02□□□□□ -0.32
SFSWAP-210ENST00000541286 MC2RQ01718 297 aa13.02□□□□□ -0.32
SFSWAP-210ENST00000541286 ZNF85Q03923 595 aa13.02□□□□□ -0.32
SFSWAP-210ENST00000541286 ARHGAP11BQ3KRB8 267 aa13.02□□□□□ -0.32
SFSWAP-210ENST00000541286 POMZP3Q6PJE2 187 aa13.02□□□□□ -0.32
SFSWAP-210ENST00000541286 MRPS24Q96EL2 167 aaKnown RBP13.02□□□□□ -0.32
SFSWAP-210ENST00000541286 FKRPQ9H9S5 495 aa13.02□□□□□ -0.32
SFSWAP-210ENST00000541286 CMC2Q9NRP2 79 aa13.02□□□□□ -0.32
SFSWAP-210ENST00000541286 SIGLEC7Q9Y286 467 aa13.02□□□□□ -0.32
SFSWAP-210ENST00000541286 A0A0J9YY10 115 aa13.02□□□□□ -0.33
SFSWAP-210ENST00000541286 A0A1B0GWA3 101 aa13.02□□□□□ -0.33
SFSWAP-210ENST00000541286 KCNAB3O43448 404 aa13.02□□□□□ -0.33
SFSWAP-210ENST00000541286 RLN1P04808 185 aa13.02□□□□□ -0.33
SFSWAP-210ENST00000541286 DBIP07108 87 aaKnown RBP13.02□□□□□ -0.33
SFSWAP-210ENST00000541286 NID1P14543 1247 aa13.02□□□□□ -0.33
SFSWAP-210ENST00000541286 KIR2DS3Q14952 304 aa13.02□□□□□ -0.33
SFSWAP-210ENST00000541286 LRRC37A5PQ49AS3 106 aa13.02□□□□□ -0.33
SFSWAP-210ENST00000541286 LRRN1Q6UXK5 716 aa13.02□□□□□ -0.33
SFSWAP-210ENST00000541286 OR11G2Q8NGC1 345 aa13.02□□□□□ -0.33
SFSWAP-210ENST00000541286 FAM174AQ8TBP5 190 aa13.02□□□□□ -0.33
SFSWAP-210ENST00000541286 LGALS14Q8TCE9 139 aa13.02□□□□□ -0.33
SFSWAP-210ENST00000541286 KISS1RQ969F8 398 aaPredicted RBP13.02□□□□□ -0.33
SFSWAP-210ENST00000541286 NMNAT3Q96T66 252 aa13.02□□□□□ -0.33
SFSWAP-210ENST00000541286 SLC6A15Q9H2J7 730 aa13.02□□□□□ -0.33
SFSWAP-210ENST00000541286 ANKRD19PQ9H560 264 aa13.02□□□□□ -0.33
SFSWAP-210ENST00000541286 ADGRL4Q9HBW9 690 aa13.02□□□□□ -0.33
SFSWAP-210ENST00000541286 PLCL2Q9UPR0 1127 aa13.02□□□□□ -0.33
SFSWAP-210ENST00000541286 SLC35A3Q9Y2D2 325 aa13.02□□□□□ -0.33
SFSWAP-210ENST00000541286 IGHV5-10-1A0A0J9YXX1 117 aa13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 KRBOX1C9JBD0 128 aa13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 HIST1H1CP16403 213 aaKnown RBP13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 THBS2P35442 1172 aa13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 RPS15AP62244 130 aaKnown RBP13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 PYHIN1Q6K0P9 492 aa13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 ZCCHC12Q6PEW1 402 aa13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 LNX2Q8N448 690 aa13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 NR4A3Q92570 626 aa13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 ZNF764Q96H86 408 aaPredicted RBP13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 CCDC74BQ96LY2 380 aa13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 TMEM9BQ9NQ34 198 aa13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 PHF11Q9UIL8 331 aa13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 PILRAQ9UKJ1 303 aa13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 A0A087WV48 116 aa13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 A0A1B0GVI7 797 aa13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 MCRIP1C9JLW8 97 aa13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 BLOC1S5-TXNDC5H3BN57 136 aa13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 SUSD5O60279 629 aa13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 SELENOFO60613 162 aa13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 ADAM11O75078 769 aa13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 KHDRBS3O75525 346 aaKnown RBP13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 RPS27P42677 84 aaKnown RBP13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 EMDP50402 254 aa13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 POLR2GP62487 172 aaKnown RBP eCLIP13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 STX4Q12846 297 aa13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 DUSP8Q13202 625 aa13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 PDSS1Q5T2R2 415 aa13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 PRAMEF8Q5VWM4 474 aa13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 PRAMEF7Q5VXH5 474 aa13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 MCATQ8IVS2 390 aaKnown RBP13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 NAXDQ8IW45 347 aa13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 OR52R1Q8NGF1 315 aa13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 OR1S1Q8NH92 325 aa13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 TSSK2Q96PF2 358 aa13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 NKX3-1Q99801 234 aaPredicted RBP13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 MICU1Q9BPX6 476 aa13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 NBEAQ8NFP9 2946 aa13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 PEX14O75381 377 aa13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 RDH16O75452 317 aa13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 RP2O75695 350 aa13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 LDOC1O95751 146 aaPredicted RBP13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 RBMS1P29558 406 aaKnown RBP13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 FAM199XQ6PEV8 388 aaPredicted RBP13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 C11orf88Q6PI97 169 aa13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 TMUB2Q71RG4 321 aa13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 PDZD9Q8IXQ8 264 aa13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 OR2L13Q8N349 312 aa13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 BRIX1Q8TDN6 353 aaKnown RBP13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 ZFYVE21Q9BQ24 234 aa13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 PIPOXQ9P0Z9 390 aa13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 KIF25Q9UIL4 384 aa13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 SPACA6W5XKT8 324 aa13.01□□□□□ -0.33
SFSWAP-210ENST00000541286 A8MXK9 166 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms