RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 IL34Q6ZMJ4 242 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 BAGE3Q86Y29 109 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 BAGE2Q86Y30 109 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 MCATQ8IVS2 390 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 OR6K3Q8NGY3 331 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 MITD1Q8WV92 249 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 NKX3-1Q99801 234 aaPredicted RBP13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 IKZF5Q9H5V7 419 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 RGPD2P0DJD1 1756 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 TRAPPC2LH3BP13 241 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 HPNP05981 417 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 OMGP23515 440 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 SLC16A12Q6ZSM3 486 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 BTLAQ7Z6A9 289 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 CALHM3Q86XJ0 350 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 PTOV1Q86YD1 416 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 PRR22Q8IZ63 422 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 OR5M8Q8NGP6 311 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 TMED6Q8WW62 240 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 SMIM19Q96E16 107 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 GNPNAT1Q96EK6 184 aaPredicted RBP13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 PLEKHA2Q9HB19 425 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 TNFRSF12AQ9NP84 129 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 TAAR2Q9P1P5 351 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 SLC23A1Q9UHI7 598 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 TMEFF2Q9UIK5 374 aaPredicted RBP13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 GAB2Q9UQC2 676 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 IFITM5A6NNB3 132 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 ST8SIA3O43173 380 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 FCGR2AP12318 317 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 CALCRP30988 508 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 FGF9P31371 208 aaPredicted RBP13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 DHPSP49366 369 aaPredicted RBP13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 DUSP3P51452 185 aaPredicted RBP13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 H3F3AP84243 136 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 SFRP5Q5T4F7 317 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 ESPNLQ6ZVH7 1005 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 KIAA1958Q8N8K9 716 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 PDCD1LG2Q9BQ51 273 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 NXF5Q9H1B4 397 aaKnown RBP13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 BCL2L10Q9HD36 194 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 H2AFB1P0C5Y9 115 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 F3P13726 295 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 CPN1P15169 458 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 DPP4P27487 766 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 HOXD11P31277 338 aaPredicted RBP13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 OR1D4P47884 311 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 UBE2NP61088 152 aaKnown RBP13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 ADIRFQ15847 76 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 HSF5Q4G112 596 aaPredicted RBP13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 FCRL6Q6DN72 434 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 RTL10Q7L3V2 364 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 CMTM4Q8IZR5 234 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 OR2G3Q8NGZ4 309 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 OR1E3Q8WZA6 343 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 CDH20Q9HBT6 801 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 M0R082 166 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 CCSO14618 274 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 AADACP22760 399 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 SCGB2A2Q13296 93 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 DOC2BQ14184 412 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 CLINT1Q14677 625 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 VRK3Q8IV63 474 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 TXN2Q99757 166 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 GPR174Q9BXC1 333 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 ACOXLQ9NUZ1 547 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 NUP98P52948 1817 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 HMGN4O00479 90 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 DBHP09172 617 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 PRR35P0CG20 571 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 HLA-DOBP13765 273 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 C15orf54Q8N8G6 183 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 OR51A4Q8NGJ6 313 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 CYSLTR2Q9NS75 346 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 VDAC3Q9Y277 283 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 EMC9Q9Y3B6 208 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 B4GALT3O60512 393 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 SELENOFO60613 162 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 ACTL6BO94805 426 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 CFIP05156 583 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 MTCP1P56278 107 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 AFMIDQ63HM1 303 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 ZNF852Q6ZMS4 543 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 RBM45Q8IUH3 476 aaKnown RBP13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 COMMD1Q8N668 190 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 INSM2Q96T92 566 aaPredicted RBP13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 FN3KRPQ9HA64 309 aa13.78□□□□□ -0.2
SMARCA4-207ENST00000541122 AHDC1Q5TGY3 1603 aaPredicted RBP13.77□□□□□ -0.2
SMARCA4-207ENST00000541122 SUSD5O60279 629 aa13.77□□□□□ -0.2
SMARCA4-207ENST00000541122 NPY4RP50391 375 aa13.77□□□□□ -0.2
SMARCA4-207ENST00000541122 SLC36A2Q495M3 483 aa13.77□□□□□ -0.2
SMARCA4-207ENST00000541122 DPPA2Q7Z7J5 298 aa13.77□□□□□ -0.2
SMARCA4-207ENST00000541122 DCBLD2Q96PD2 775 aa13.77□□□□□ -0.2
SMARCA4-207ENST00000541122 C19orf43Q9BQ61 176 aa13.77□□□□□ -0.2
SMARCA4-207ENST00000541122 SGPP1Q9BX95 441 aa13.77□□□□□ -0.2
SMARCA4-207ENST00000541122 MEIKINA0A087WXM9 373 aa13.77□□□□□ -0.21
SMARCA4-207ENST00000541122 GFYI3L273 518 aa13.77□□□□□ -0.21
SMARCA4-207ENST00000541122 MT-ATP6P00846 226 aa13.77□□□□□ -0.21
SMARCA4-207ENST00000541122 OR4E1P0C645 316 aa13.77□□□□□ -0.21
SMARCA4-207ENST00000541122 P2RY2P41231 377 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms