RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 CELA3BP08861 270 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 CECR9P0C854 216 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 CBR1P16152 277 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 ZNF26P17031 533 aaPredicted RBP8.04□□□□□ -1.12
SNHG1-215ENST00000540904 PAX7P23759 505 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 ACVR1BP36896 505 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 ZNF84P51523 738 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 IDH3GP51553 393 aaPredicted RBP8.04□□□□□ -1.12
SNHG1-215ENST00000540904 ERVK-25P63136 954 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 CHRNB3Q05901 458 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 TRAP1Q12931 704 aaKnown RBP8.04□□□□□ -1.12
SNHG1-215ENST00000540904 BNIP1Q12981 228 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 TAF11Q15544 211 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 HIST3H3Q16695 136 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 GSG1Q2KHT4 349 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 ZNF627Q7L945 461 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 PIWIL3Q7Z3Z3 882 aaKnown RBP8.04□□□□□ -1.12
SNHG1-215ENST00000540904 ZER1Q7Z7L7 766 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 MDP1Q86V88 176 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 CCDC36Q8IYA8 594 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 CLDN22Q8N7P3 220 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 SMAP2Q8WU79 429 aaPredicted RBP8.04□□□□□ -1.12
SNHG1-215ENST00000540904 TMEM171Q8WVE6 324 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 NSMAFQ92636 917 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 HTRA1Q92743 480 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 RSRC1Q96IZ7 334 aaKnown RBP8.04□□□□□ -1.12
SNHG1-215ENST00000540904 TSPAN32Q96QS1 320 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 GPA33Q99795 319 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 KCNS3Q9BQ31 491 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 TRIM15Q9C019 465 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 NDEL1Q9GZM8 345 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 MAGIXQ9H6Y5 334 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 SEC61A2Q9H9S3 476 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 MOV10Q9HCE1 1003 aaKnown RBP8.04□□□□□ -1.12
SNHG1-215ENST00000540904 TMEM38BQ9NVV0 291 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 CRNNQ9UBG3 495 aaPredicted RBP8.04□□□□□ -1.12
SNHG1-215ENST00000540904 GRHPRQ9UBQ7 328 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 IL20RAQ9UHF4 553 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 TMCC3Q9ULS5 477 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 SIGLEC7Q9Y286 467 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 ADAM18Q9Y3Q7 739 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 ATP23Q9Y6H3 246 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 PRR14LQ5THK1 2151 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 HRNRQ86YZ3 2850 aaPredicted RBP8.04□□□□□ -1.12
SNHG1-215ENST00000540904 AKAP6Q13023 2319 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 A6NIZ1 184 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 CENPBD1B2RD01 187 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 E7EQL1 145 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 TNFRSF11BO00300 401 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 ARHGEF9O43307 516 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 ENTPD5O75356 428 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 PTP4A3O75365 173 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 KRT36O76013 467 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 NDUFB2O95178 105 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 IGKV3-15P01624 115 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 IGLV1-44P01699 117 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 CRYAAP02489 173 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 CD14P08571 375 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 PATE4P0C8F1 98 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 OR8G3PP0DMU2 310 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 NR2C1P13056 603 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 CDAP32320 146 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 ARR3P36575 388 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 IFNGR2P38484 337 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 MAGEA2P43356 314 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 PTDSS1P48651 473 aaKnown RBP8.03□□□□□ -1.12
SNHG1-215ENST00000540904 ERFP50548 548 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 RAP1BP61224 184 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 RAP1AP62834 184 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 NAAAQ02083 359 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 FMODQ06828 376 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 PPP1R8Q12972 351 aaKnown RBP8.03□□□□□ -1.12
SNHG1-215ENST00000540904 FLOT2Q14254 428 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 PGGHGQ32M88 737 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 FAM205BPQ63HN1 556 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 B3GLCTQ6Y288 498 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 MYPOPQ86VE0 399 aaPredicted RBP8.03□□□□□ -1.12
SNHG1-215ENST00000540904 SKA3Q8IX90 412 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 SLC22A24Q8N4F4 322 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 ARIH2OSQ8N7S6 290 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 FAM169BQ8N8A8 192 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 ZNF519Q8TB69 540 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 NANOS1Q8WY41 292 aaKnown RBP8.03□□□□□ -1.12
SNHG1-215ENST00000540904 POP5Q969H6 163 aaKnown RBP8.03□□□□□ -1.12
SNHG1-215ENST00000540904 PERPQ96FX8 193 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 Q96M85 177 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 ZNF570Q96NI8 536 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 SH3GL3Q99963 347 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 CXXC4Q9H2H0 198 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 CXorf56Q9H5V9 222 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 NOX3Q9HBY0 568 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 FAIMQ9NVQ4 179 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 B3GNT2Q9NY97 397 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 ZNF224Q9NZL3 707 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 LYVE1Q9Y5Y7 322 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 U3KQV3 271 aa8.03□□□□□ -1.12
SNHG1-215ENST00000540904 CCDC168Q8NDH2 2452 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 IGKV1D-43A0A0B4J1Z2 117 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 TEX13CA0A0J9YWL9 993 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 DHRS12A0PJE2 317 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms