RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 SLC3A1Q07837 685 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 LCP2Q13094 533 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 CALCOCO2Q13137 446 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 TP53BP2Q13625 1128 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 PDE7AQ13946 482 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 CEACAM7Q14002 265 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 KIAA0040Q15053 153 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 MOGQ16653 247 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 GSG1Q2KHT4 349 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 HFEQ30201 348 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 ATP6AP1LQ52LC2 224 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 PRAMEF8Q5VWM4 474 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 PRAMEF7Q5VXH5 474 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 TMEM225Q6GV28 225 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 NIPAL3Q6P499 406 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 EMBQ6PCB8 327 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 FIP1L1Q6UN15 594 aaKnown RBP3.87□□□□□ -1.79
SNHG1-214ENST00000540865 USP51Q70EK9 711 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 CREB3L2Q70SY1 520 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 GPAT4Q86UL3 456 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 EPHX4Q8IUS5 362 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 KLHL7Q8IXQ5 586 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 PARP8Q8N3A8 854 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 PRR18Q8N4B5 295 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 TMEM99Q8N816 258 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 OR56A1Q8NGH5 318 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 OR52E2Q8NGJ4 325 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 LINC01006Q8NI28 216 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 PSMA8Q8TAA3 256 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 MGARPQ8TDB4 240 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 MTERF3Q96E29 417 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 KTI12Q96EK9 354 aaPredicted RBP3.87□□□□□ -1.79
SNHG1-214ENST00000540865 ELMOD3Q96FG2 381 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 NEU1Q99519 415 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 CCT7Q99832 543 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 GATA5Q9BWX5 397 aaPredicted RBP3.87□□□□□ -1.79
SNHG1-214ENST00000540865 SERHL2Q9H4I8 314 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 GPR35Q9HC97 309 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 NOX4Q9NPH5 578 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 RRAGDQ9NQL2 400 aaPredicted RBP3.87□□□□□ -1.79
SNHG1-214ENST00000540865 MMP26Q9NRE1 261 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 DECR2Q9NUI1 292 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 NECAP2Q9NVZ3 263 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 SLCO1C1Q9NYB5 712 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 SH3BP4Q9P0V3 963 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 TAAR3PQ9P1P4 343 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 SEC14L4Q9UDX3 406 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 SLC7A8Q9UHI5 535 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 OSGIN1Q9UJX0 560 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 PRDM4Q9UKN5 801 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 FBXL3Q9UKT7 428 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 FZR1Q9UM11 496 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 SNX12Q9UMY4 172 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 RCE1Q9Y256 329 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 RASD1Q9Y272 281 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 MYRFQ9Y2G1 1151 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 TMED7Q9Y3B3 224 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 TIMM22Q9Y584 194 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 INSIG2Q9Y5U4 225 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 KCNE3Q9Y6H6 103 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 STARD9Q9P2P6 4700 aa3.86□□□□□ -1.79
SNHG1-214ENST00000540865 IGLV3-9A0A075B6K5 115 aa3.86□□□□□ -1.79
SNHG1-214ENST00000540865 CENPVL1A0A0U1RR11 272 aa3.86□□□□□ -1.79
SNHG1-214ENST00000540865 ISPDA4D126 451 aa3.86□□□□□ -1.79
SNHG1-214ENST00000540865 DUXAA6NLW8 204 aa3.86□□□□□ -1.79
SNHG1-214ENST00000540865 A8MXK9 166 aa3.86□□□□□ -1.79
SNHG1-214ENST00000540865 ZNF99A8MXY4 864 aaPredicted RBP3.86□□□□□ -1.79
SNHG1-214ENST00000540865 GOLGA6L6A8MZA4 724 aa3.86□□□□□ -1.79
SNHG1-214ENST00000540865 H3BQF6 201 aa3.86□□□□□ -1.79
SNHG1-214ENST00000540865 FAAHO00519 579 aa3.86□□□□□ -1.79
SNHG1-214ENST00000540865 DHHO43323 396 aa3.86□□□□□ -1.79
SNHG1-214ENST00000540865 FRS3O43559 492 aa3.86□□□□□ -1.79
SNHG1-214ENST00000540865 PIP5K1CO60331 668 aa3.86□□□□□ -1.79
SNHG1-214ENST00000540865 FCMRO60667 390 aa3.86□□□□□ -1.79
SNHG1-214ENST00000540865 SLC43A1O75387 559 aa3.86□□□□□ -1.79
SNHG1-214ENST00000540865 SEC22BO75396 215 aa3.86□□□□□ -1.79
SNHG1-214ENST00000540865 STX11O75558 287 aa3.86□□□□□ -1.79
SNHG1-214ENST00000540865 HLA-HP01893 362 aa3.86□□□□□ -1.79
SNHG1-214ENST00000540865 MT-ND5P03915 603 aa3.86□□□□□ -1.79
SNHG1-214ENST00000540865 CD79AP11912 226 aa3.86□□□□□ -1.79
SNHG1-214ENST00000540865 ZNF250P15622 560 aa3.86□□□□□ -1.79
SNHG1-214ENST00000540865 TCP1P17987 556 aaKnown RBP3.86□□□□□ -1.79
SNHG1-214ENST00000540865 TAC1P20366 129 aa3.86□□□□□ -1.79
SNHG1-214ENST00000540865 IMPDH1P20839 514 aa3.86□□□□□ -1.79
SNHG1-214ENST00000540865 PRPH2P23942 346 aa3.86□□□□□ -1.79
SNHG1-214ENST00000540865 CD80P33681 288 aa3.86□□□□□ -1.79
SNHG1-214ENST00000540865 RYKP34925 604 aa3.86□□□□□ -1.79
SNHG1-214ENST00000540865 MAGEA4P43358 317 aa3.86□□□□□ -1.79
SNHG1-214ENST00000540865 CAPZA2P47755 286 aa3.86□□□□□ -1.79
SNHG1-214ENST00000540865 IDH2P48735 452 aaKnown RBP3.86□□□□□ -1.79
SNHG1-214ENST00000540865 KLF3P57682 345 aaPredicted RBP3.86□□□□□ -1.79
SNHG1-214ENST00000540865 BPIFB3P59826 476 aa3.86□□□□□ -1.79
SNHG1-214ENST00000540865 CTXN1P60606 82 aa3.86□□□□□ -1.79
SNHG1-214ENST00000540865 OR7A5Q15622 319 aa3.86□□□□□ -1.79
SNHG1-214ENST00000540865 GPR68Q15743 365 aa3.86□□□□□ -1.79
SNHG1-214ENST00000540865 DEFB112Q30KQ8 113 aa3.86□□□□□ -1.79
SNHG1-214ENST00000540865 PGS1Q32NB8 556 aa3.86□□□□□ -1.79
SNHG1-214ENST00000540865 ALKBH6Q3KRA9 238 aa3.86□□□□□ -1.79
SNHG1-214ENST00000540865 NXNQ6DKJ4 435 aa3.86□□□□□ -1.79
SNHG1-214ENST00000540865 RGS7BPQ6MZT1 257 aaPredicted RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms