RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 ZNF84P51523 738 aa11.67□□□□□ -0.54
CCDC130-202ENST00000540216 ZNF133P52736 654 aaPredicted RBP11.67□□□□□ -0.54
CCDC130-202ENST00000540216 CTXN1P60606 82 aa11.67□□□□□ -0.54
CCDC130-202ENST00000540216 RAP1BP61224 184 aa11.67□□□□□ -0.54
CCDC130-202ENST00000540216 RAP1AP62834 184 aa11.67□□□□□ -0.54
CCDC130-202ENST00000540216 SPOCK1Q08629 439 aa11.67□□□□□ -0.54
CCDC130-202ENST00000540216 GSG1Q2KHT4 349 aa11.67□□□□□ -0.54
CCDC130-202ENST00000540216 PGGHGQ32M88 737 aa11.67□□□□□ -0.54
CCDC130-202ENST00000540216 ZBED5Q49AG3 693 aa11.67□□□□□ -0.54
CCDC130-202ENST00000540216 C10orf128Q5T292 105 aa11.67□□□□□ -0.54
CCDC130-202ENST00000540216 SHEQ5VZ18 495 aa11.67□□□□□ -0.54
CCDC130-202ENST00000540216 ZNF544Q6NX49 715 aa11.67□□□□□ -0.54
CCDC130-202ENST00000540216 CYP2R1Q6VVX0 501 aa11.67□□□□□ -0.54
CCDC130-202ENST00000540216 DTX2Q86UW9 622 aa11.67□□□□□ -0.54
CCDC130-202ENST00000540216 LRRC75AQ8NAA5 344 aa11.67□□□□□ -0.54
CCDC130-202ENST00000540216 IL17RDQ8NFM7 739 aa11.67□□□□□ -0.54
CCDC130-202ENST00000540216 MCHR2Q969V1 340 aa11.67□□□□□ -0.54
CCDC130-202ENST00000540216 FAM46AQ96IP4 442 aaKnown RBP11.67□□□□□ -0.54
CCDC130-202ENST00000540216 LRGUKQ96M69 825 aa11.67□□□□□ -0.54
CCDC130-202ENST00000540216 TNFRSF13CQ96RJ3 184 aa11.67□□□□□ -0.54
CCDC130-202ENST00000540216 TRIM15Q9C019 465 aa11.67□□□□□ -0.54
CCDC130-202ENST00000540216 ZNF701Q9NV72 531 aaPredicted RBP11.67□□□□□ -0.54
CCDC130-202ENST00000540216 TMEM38BQ9NVV0 291 aa11.67□□□□□ -0.54
CCDC130-202ENST00000540216 FBXL3Q9UKT7 428 aa11.67□□□□□ -0.54
CCDC130-202ENST00000540216 AURKCQ9UQB9 309 aa11.67□□□□□ -0.54
CCDC130-202ENST00000540216 ITPR3Q14573 2671 aa11.66□□□□□ -0.54
CCDC130-202ENST00000540216 ARID1AO14497 2285 aa11.66□□□□□ -0.54
CCDC130-202ENST00000540216 TCRBV5S2A0A599 114 aa11.66□□□□□ -0.54
CCDC130-202ENST00000540216 ATP6V1G2-DDX39BF2Z307 99 aa11.66□□□□□ -0.54
CCDC130-202ENST00000540216 GYG2O15488 501 aa11.66□□□□□ -0.54
CCDC130-202ENST00000540216 KRT36O76013 467 aa11.66□□□□□ -0.54
CCDC130-202ENST00000540216 UBL3O95164 117 aa11.66□□□□□ -0.54
CCDC130-202ENST00000540216 NDUFB2O95178 105 aa11.66□□□□□ -0.54
CCDC130-202ENST00000540216 SOD3P08294 240 aa11.66□□□□□ -0.54
CCDC130-202ENST00000540216 CD14P08571 375 aa11.66□□□□□ -0.54
CCDC130-202ENST00000540216 CECR9P0C854 216 aa11.66□□□□□ -0.54
CCDC130-202ENST00000540216 OR8G3PP0DMU2 310 aa11.66□□□□□ -0.54
CCDC130-202ENST00000540216 HOXB6P17509 224 aaKnown RBP11.66□□□□□ -0.54
CCDC130-202ENST00000540216 RRM2P31350 389 aa11.66□□□□□ -0.54
CCDC130-202ENST00000540216 RPL4P36578 427 aaKnown RBP11.66□□□□□ -0.54
CCDC130-202ENST00000540216 TUBA1BP68363 451 aa11.66□□□□□ -0.54
CCDC130-202ENST00000540216 TUBA4AP68366 448 aa11.66□□□□□ -0.54
CCDC130-202ENST00000540216 NKX6-1P78426 367 aaPredicted RBP11.66□□□□□ -0.54
CCDC130-202ENST00000540216 NAAAQ02083 359 aa11.66□□□□□ -0.54
CCDC130-202ENST00000540216 RUNX1T1Q06455 604 aa11.66□□□□□ -0.54
CCDC130-202ENST00000540216 TRAP1Q12931 704 aaKnown RBP11.66□□□□□ -0.54
CCDC130-202ENST00000540216 TOP3AQ13472 1001 aaPredicted RBP11.66□□□□□ -0.54
CCDC130-202ENST00000540216 SEC23BQ15437 767 aa11.66□□□□□ -0.54
CCDC130-202ENST00000540216 FAM98BQ52LJ0 330 aaKnown RBP11.66□□□□□ -0.54
CCDC130-202ENST00000540216 AGAP6Q5VW22 663 aa11.66□□□□□ -0.54
CCDC130-202ENST00000540216 PRSS57Q6UWY2 283 aa11.66□□□□□ -0.54
CCDC130-202ENST00000540216 TUBA1AQ71U36 451 aa11.66□□□□□ -0.54
CCDC130-202ENST00000540216 MEX3DQ86XN8 651 aaKnown RBP11.66□□□□□ -0.54
CCDC130-202ENST00000540216 TGIF2LYQ8IUE0 185 aa11.66□□□□□ -0.54
CCDC130-202ENST00000540216 OR52J3Q8NH60 311 aa11.66□□□□□ -0.54
CCDC130-202ENST00000540216 ZNF519Q8TB69 540 aa11.66□□□□□ -0.54
CCDC130-202ENST00000540216 CCDC124Q96CT7 223 aaKnown RBP11.66□□□□□ -0.54
CCDC130-202ENST00000540216 KCNK17Q96T54 332 aa11.66□□□□□ -0.54
CCDC130-202ENST00000540216 THTPAQ9BU02 230 aa11.66□□□□□ -0.54
CCDC130-202ENST00000540216 B3GNT2Q9NY97 397 aa11.66□□□□□ -0.54
CCDC130-202ENST00000540216 TMCC3Q9ULS5 477 aa11.66□□□□□ -0.54
CCDC130-202ENST00000540216 LAMP3Q9UQV4 416 aa11.66□□□□□ -0.54
CCDC130-202ENST00000540216 SIGLEC7Q9Y286 467 aa11.66□□□□□ -0.54
CCDC130-202ENST00000540216 HEATR1Q9H583 2144 aaKnown RBP11.65□□□□□ -0.54
CCDC130-202ENST00000540216 HIVEP1P15822 2718 aa11.65□□□□□ -0.54
CCDC130-202ENST00000540216 ZNF503-AS2A6NEH8 195 aa11.65□□□□□ -0.54
CCDC130-202ENST00000540216 E7EQL1 145 aa11.65□□□□□ -0.54
CCDC130-202ENST00000540216 OVOL3O00110 214 aa11.65□□□□□ -0.54
CCDC130-202ENST00000540216 AHCYL1O43865 530 aa11.65□□□□□ -0.54
CCDC130-202ENST00000540216 RAB36O95755 333 aa11.65□□□□□ -0.54
CCDC130-202ENST00000540216 HLA-HP01893 362 aa11.65□□□□□ -0.54
CCDC130-202ENST00000540216 CD79AP11912 226 aa11.65□□□□□ -0.54
CCDC130-202ENST00000540216 FPR3P25089 353 aa11.65□□□□□ -0.54
CCDC130-202ENST00000540216 TTKP33981 857 aa11.65□□□□□ -0.54
CCDC130-202ENST00000540216 ACVR1BP36896 505 aa11.65□□□□□ -0.54
CCDC130-202ENST00000540216 PTH2RP49190 550 aa11.65□□□□□ -0.54
CCDC130-202ENST00000540216 IDH3GP51553 393 aaPredicted RBP11.65□□□□□ -0.54
CCDC130-202ENST00000540216 ADAM8P78325 824 aa11.65□□□□□ -0.54
CCDC130-202ENST00000540216 MS4A2Q01362 244 aa11.65□□□□□ -0.54
CCDC130-202ENST00000540216 CHRNB3Q05901 458 aa11.65□□□□□ -0.54
CCDC130-202ENST00000540216 CD47Q08722 323 aa11.65□□□□□ -0.54
CCDC130-202ENST00000540216 THEM4Q5T1C6 240 aa11.65□□□□□ -0.54
CCDC130-202ENST00000540216 B3GLCTQ6Y288 498 aa11.65□□□□□ -0.54
CCDC130-202ENST00000540216 MDP1Q86V88 176 aa11.65□□□□□ -0.54
CCDC130-202ENST00000540216 IGFN1Q86VF2 1251 aa11.65□□□□□ -0.54
CCDC130-202ENST00000540216 FBXL14Q8N1E6 418 aa11.65□□□□□ -0.54
CCDC130-202ENST00000540216 SLC22A24Q8N4F4 322 aa11.65□□□□□ -0.54
CCDC130-202ENST00000540216 LINC00471Q8N535 108 aa11.65□□□□□ -0.54
CCDC130-202ENST00000540216 ARIH2OSQ8N7S6 290 aa11.65□□□□□ -0.54
CCDC130-202ENST00000540216 SYT14Q8NB59 555 aa11.65□□□□□ -0.54
CCDC130-202ENST00000540216 OR4F15Q8NGB8 312 aa11.65□□□□□ -0.54
CCDC130-202ENST00000540216 HDAC2Q92769 488 aaKnown RBP11.65□□□□□ -0.54
CCDC130-202ENST00000540216 GTPBP3Q969Y2 492 aaKnown RBP11.65□□□□□ -0.54
CCDC130-202ENST00000540216 NMD3Q96D46 503 aaKnown RBP11.65□□□□□ -0.54
CCDC130-202ENST00000540216 RSRC1Q96IZ7 334 aaKnown RBP11.65□□□□□ -0.54
CCDC130-202ENST00000540216 TSPAN32Q96QS1 320 aa11.65□□□□□ -0.54
CCDC130-202ENST00000540216 RBP7Q96R05 134 aa11.65□□□□□ -0.54
CCDC130-202ENST00000540216 GPX7Q96SL4 187 aaPredicted RBP11.65□□□□□ -0.54
CCDC130-202ENST00000540216 TRAF4Q9BUZ4 470 aaPredicted RBP11.65□□□□□ -0.54
CCDC130-202ENST00000540216 ZNF224Q9NZL3 707 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms