RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 SULT1A3P0DMM9 295 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 SULT1A4P0DMN0 295 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 PSMA6P60900 246 aaKnown RBP12.36□□□□□ -0.43
BNIP3-202ENST00000540159 FMODQ06828 376 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 CCINQ13939 588 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 GGTLC2Q14390 218 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 MANEAQ5SRI9 462 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 SLC16A9Q7RTY1 509 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 TMED4Q7Z7H5 227 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 BIVMQ86UB2 503 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 DND1Q8IYX4 353 aaKnown RBP12.36□□□□□ -0.43
BNIP3-202ENST00000540159 TEX19Q8NA77 164 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 NUDT9Q9BW91 350 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 TBL1XR1Q9BZK7 514 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 CHST6Q9GZX3 395 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 PDE7BQ9NP56 450 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 FBXL3Q9UKT7 428 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 MKL2Q9ULH7 1088 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 CA14Q9ULX7 337 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 VDAC3Q9Y277 283 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 HS3ST3A1Q9Y663 406 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 MEIKINA0A087WXM9 373 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 G3V3Q6 166 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 LMX1BO60663 402 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 CSNK1EP49674 416 aaKnown RBP12.36□□□□□ -0.43
BNIP3-202ENST00000540159 ALKAL2Q6UX46 152 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 ZNF782Q6ZMW2 699 aaPredicted RBP12.36□□□□□ -0.43
BNIP3-202ENST00000540159 ZNF627Q7L945 461 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 CCDC28AQ8IWP9 274 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 SLC38A6Q8IZM9 456 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 C17orf50Q8WW18 174 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 ASB12Q8WXK4 309 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 CCDC74AQ96AQ1 378 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 GPR137Q96N19 417 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 INTS14Q96SY0 518 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 DUSP15Q9H1R2 295 aaPredicted RBP12.36□□□□□ -0.43
BNIP3-202ENST00000540159 B9D1Q9UPM9 204 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 HIF3AQ9Y2N7 669 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 FXYD6-FXYD2A0A087WZ82 144 aa12.35□□□□□ -0.43
BNIP3-202ENST00000540159 GABARAPH6UMI1 98 aa12.35□□□□□ -0.43
BNIP3-202ENST00000540159 M0R233 179 aa12.35□□□□□ -0.43
BNIP3-202ENST00000540159 TACSTD2P09758 323 aa12.35□□□□□ -0.43
BNIP3-202ENST00000540159 POU3F4P49335 361 aa12.35□□□□□ -0.43
BNIP3-202ENST00000540159 MFGE8Q08431 387 aaPredicted RBP12.35□□□□□ -0.43
BNIP3-202ENST00000540159 ANGPT1Q15389 498 aa12.35□□□□□ -0.43
BNIP3-202ENST00000540159 HLA-DQA1Q5Y7H0 255 aa12.35□□□□□ -0.43
BNIP3-202ENST00000540159 C11orf88Q6PI97 169 aa12.35□□□□□ -0.43
BNIP3-202ENST00000540159 COMMD7Q86VX2 200 aa12.35□□□□□ -0.43
BNIP3-202ENST00000540159 BPHLQ86WA6 291 aaPredicted RBP12.35□□□□□ -0.43
BNIP3-202ENST00000540159 OR51A2Q8NGJ7 313 aa12.35□□□□□ -0.43
BNIP3-202ENST00000540159 DUSP19Q8WTR2 217 aa12.35□□□□□ -0.43
BNIP3-202ENST00000540159 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.35□□□□□ -0.431e-6■■□□□ 13.2
BNIP3-202ENST00000540159 FXYD6Q9H0Q3 95 aa12.35□□□□□ -0.43
BNIP3-202ENST00000540159 TMEM185BQ9H7F4 350 aa12.35□□□□□ -0.43
BNIP3-202ENST00000540159 FBRSQ9HAH7 460 aa12.35□□□□□ -0.43
BNIP3-202ENST00000540159 A0A1W2PPC4 97 aa12.35□□□□□ -0.43
BNIP3-202ENST00000540159 SOX1O00570 391 aaPredicted RBP12.35□□□□□ -0.43
BNIP3-202ENST00000540159 PDCD5O14737 125 aa12.35□□□□□ -0.43
BNIP3-202ENST00000540159 GTF2F2P13984 249 aa12.35□□□□□ -0.43
BNIP3-202ENST00000540159 CTLA4P16410 223 aa12.35□□□□□ -0.43
BNIP3-202ENST00000540159 KIR3DL2P43630 455 aa12.35□□□□□ -0.43
BNIP3-202ENST00000540159 ADAM8P78325 824 aa12.35□□□□□ -0.43
BNIP3-202ENST00000540159 SPOCK1Q08629 439 aa12.35□□□□□ -0.43
BNIP3-202ENST00000540159 ACKR1Q16570 336 aa12.35□□□□□ -0.43
BNIP3-202ENST00000540159 SLC6A19Q695T7 634 aa12.35□□□□□ -0.43
BNIP3-202ENST00000540159 LRFN4Q6PJG9 635 aa12.35□□□□□ -0.43
BNIP3-202ENST00000540159 UNQ9370/PRO34162Q6UXP9 181 aa12.35□□□□□ -0.43
BNIP3-202ENST00000540159 C17orf107Q6ZR85 190 aa12.35□□□□□ -0.43
BNIP3-202ENST00000540159 OR51S1Q8NGJ8 323 aa12.35□□□□□ -0.43
BNIP3-202ENST00000540159 OR4C16Q8NGL9 310 aa12.35□□□□□ -0.43
BNIP3-202ENST00000540159 TCTN2Q96GX1 697 aa12.35□□□□□ -0.43
BNIP3-202ENST00000540159 CYYR1Q96J86 154 aa12.35□□□□□ -0.43
BNIP3-202ENST00000540159 RBP7Q96R05 134 aa12.35□□□□□ -0.43
BNIP3-202ENST00000540159 NUDT22Q9BRQ3 303 aa12.35□□□□□ -0.43
BNIP3-202ENST00000540159 COMMD4Q9H0A8 199 aa12.35□□□□□ -0.43
BNIP3-202ENST00000540159 CUTCQ9NTM9 273 aa12.35□□□□□ -0.43
BNIP3-202ENST00000540159 FER1L5A0AVI2 2057 aa12.35□□□□□ -0.43
BNIP3-202ENST00000540159 SHISA7A6NL88 538 aa12.34□□□□□ -0.43
BNIP3-202ENST00000540159 OR4C45A6NMZ5 311 aa12.34□□□□□ -0.43
BNIP3-202ENST00000540159 M0QYG6 137 aa12.34□□□□□ -0.43
BNIP3-202ENST00000540159 GPRIN2O60269 458 aa12.34□□□□□ -0.43
BNIP3-202ENST00000540159 SRPX2O60687 465 aaPredicted RBP12.34□□□□□ -0.43
BNIP3-202ENST00000540159 RENP00797 406 aa12.34□□□□□ -0.43
BNIP3-202ENST00000540159 ASAH2BP0C7U1 165 aa12.34□□□□□ -0.43
BNIP3-202ENST00000540159 HOXD11P31277 338 aaPredicted RBP12.34□□□□□ -0.43
BNIP3-202ENST00000540159 ARRB1P49407 418 aaPredicted RBP12.34□□□□□ -0.43
BNIP3-202ENST00000540159 HSF2Q03933 536 aa12.34□□□□□ -0.43
BNIP3-202ENST00000540159 PUDPQ08623 228 aa12.34□□□□□ -0.43
BNIP3-202ENST00000540159 PLCXD2Q0VAA5 305 aa12.34□□□□□ -0.43
BNIP3-202ENST00000540159 FAM46BQ96A09 425 aa12.34□□□□□ -0.43
BNIP3-202ENST00000540159 ATG5Q9H1Y0 275 aa12.34□□□□□ -0.43
BNIP3-202ENST00000540159 SYNDIG1Q9H7V2 258 aa12.34□□□□□ -0.43
BNIP3-202ENST00000540159 PRODH2Q9UF12 536 aa12.34□□□□□ -0.43
BNIP3-202ENST00000540159 FARSAQ9Y285 508 aaKnown RBP12.34□□□□□ -0.43
BNIP3-202ENST00000540159 ASPMQ8IZT6 3477 aa12.34□□□□□ -0.43
BNIP3-202ENST00000540159 LOC101059948A0A1B0GTJ6 334 aa12.34□□□□□ -0.43
BNIP3-202ENST00000540159 H3BML4 177 aa12.34□□□□□ -0.43
BNIP3-202ENST00000540159 SIGLEC5O15389 551 aa12.34□□□□□ -0.43
BNIP3-202ENST00000540159 TPOP07202 933 aa12.34□□□□□ -0.43
BNIP3-202ENST00000540159 ALOX5APP20292 161 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms