RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 ACOXLQ9NUZ1 547 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 EVA1BQ9NVM1 165 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 COLQQ9Y215 455 aaPredicted RBP9.14□□□□□ -0.95
TRAF1-202ENST00000540010 NPFFR2Q9Y5X5 522 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 SLC22A7Q9Y694 548 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 FITM1A5D6W6 292 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 DVL2O14641 736 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 IGLV3-19P01714 112 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 TRAPPC2P0DI81 140 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 TRAPPC2BP0DI82 140 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 CAV2P51636 162 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 TPBGQ13641 420 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 OR7A5Q15622 319 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 BEND4Q6ZU67 534 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 CCDC54Q8NEL0 328 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 ZNF285Q96NJ3 590 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 RBM24Q9BX46 236 aaKnown RBP9.14□□□□□ -0.95
TRAF1-202ENST00000540010 NXF5Q9H1B4 397 aaKnown RBP9.14□□□□□ -0.95
TRAF1-202ENST00000540010 RPS10P5Q9NQ39 176 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 CES1P1Q9UKY3 287 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 RPH3AQ9Y2J0 694 aaPredicted RBP9.14□□□□□ -0.95
TRAF1-202ENST00000540010 SHISA7A6NL88 538 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 ZNF593O00488 134 aaPredicted RBP9.14□□□□□ -0.95
TRAF1-202ENST00000540010 PHYHO14832 338 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 EIF4EP06730 217 aaKnown RBP9.14□□□□□ -0.95
TRAF1-202ENST00000540010 GABRB1P18505 474 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 FBLP22087 321 aaKnown RBP9.14□□□□□ -0.95
TRAF1-202ENST00000540010 CXCL12P48061 93 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 CCR9P51686 369 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 HSD11B2P80365 405 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 Q499Y3 187 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 LIPNQ5VXI9 398 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 ZNF529Q6P280 563 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 ZNF836Q6ZNA1 936 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 CNTNAP3BQ96NU0 1288 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 CLCC1Q96S66 551 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 SDF2Q99470 211 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 CDC6Q99741 560 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 B3GNT2Q9NY97 397 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 POMT2Q9UKY4 750 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 SLC6A14Q9UN76 642 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 NPIPA2E9PIF3 369 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 NPIPA3F8WFD2 350 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 SEC14L5O43304 696 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 SRPX2O60687 465 aaPredicted RBP9.13□□□□□ -0.95
TRAF1-202ENST00000540010 DPM1O60762 260 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 DNAJB6O75190 326 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 TP53P04637 393 aaPredicted RBP9.13□□□□□ -0.95
TRAF1-202ENST00000540010 ZNF28P17035 718 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 TAS2R19P59542 299 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 CD276Q5ZPR3 534 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 OR13C9Q8NGT0 318 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 ARHGAP9Q9BRR9 750 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 MRI1Q9BV20 369 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 SEMA4CQ9C0C4 833 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 RNF32Q9H0A6 362 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 FAM60AQ9NP50 221 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 PTTG3PQ9NZH4 202 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 A0A0B4J2A0 478 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 RAD51DO75771 328 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 KLK3P07288 261 aaPredicted RBP9.13□□□□□ -0.95
TRAF1-202ENST00000540010 NME1P15531 152 aaKnown RBP9.13□□□□□ -0.95
TRAF1-202ENST00000540010 ZNF43P17038 809 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 RAB6AP20340 208 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 MEP1BQ16820 701 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 HACD4Q5VWC8 232 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 LIX1LQ8IVB5 337 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 OR51S1Q8NGJ8 323 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 OR51T1Q8NGJ9 327 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 OR5D18Q8NGL1 313 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 APH1BQ8WW43 257 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 NRSN2Q9GZP1 204 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 LYRM4Q9HD34 91 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 UBQLN4Q9NRR5 601 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 SHPKQ9UHJ6 478 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 CCDC163A0A0D9SF12 145 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 PRAMEF25A6NGN4 478 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 C1orf196B1AJZ1 125 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 ATP6V1G2-DDX39BF2Z307 99 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 FGF17O60258 216 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 GALR3O60755 368 aaPredicted RBP9.13□□□□□ -0.95
TRAF1-202ENST00000540010 TACR3P29371 465 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 ETV6P41212 452 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 EMP2P54851 167 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 POU3F1Q03052 451 aaPredicted RBP9.13□□□□□ -0.95
TRAF1-202ENST00000540010 RHEBQ15382 184 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 RAET1LQ5VY80 246 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 ESX1Q8N693 406 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 HOXB13Q92826 284 aaPredicted RBP9.13□□□□□ -0.95
TRAF1-202ENST00000540010 TM4SF19Q96DZ7 209 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 CDX2Q99626 313 aaPredicted RBP9.13□□□□□ -0.95
TRAF1-202ENST00000540010 SELENOIQ9C0D9 397 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 EMC7Q9NPA0 242 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 WNT16Q9UBV4 365 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 ATPIF1Q9UII2 106 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 PILRAQ9UKJ1 303 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 RNF215Q9Y6U7 377 aa9.13□□□□□ -0.95
TRAF1-202ENST00000540010 CCSO14618 274 aa9.12□□□□□ -0.95
TRAF1-202ENST00000540010 WNT1P04628 370 aa9.12□□□□□ -0.95
TRAF1-202ENST00000540010 PTHLHP12272 177 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms