RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 GPR171O14626 319 aa14.35□□□□□ -0.11
TRAF3-204ENST00000539721 CTLA4P16410 223 aa14.35□□□□□ -0.11
TRAF3-204ENST00000539721 CENPAP49450 140 aa14.35□□□□□ -0.11
TRAF3-204ENST00000539721 POU4F2Q12837 409 aa14.35□□□□□ -0.11
TRAF3-204ENST00000539721 KLRB1Q12918 225 aa14.35□□□□□ -0.11
TRAF3-204ENST00000539721 RNPS1Q15287 305 aaKnown RBP14.35□□□□□ -0.11
TRAF3-204ENST00000539721 LINC01590Q5TEZ4 76 aa14.35□□□□□ -0.11
TRAF3-204ENST00000539721 B3GNT6Q6ZMB0 384 aa14.35□□□□□ -0.11
TRAF3-204ENST00000539721 KCTD8Q6ZWB6 473 aa14.35□□□□□ -0.11
TRAF3-204ENST00000539721 P4HA3Q7Z4N8 544 aa14.35□□□□□ -0.11
TRAF3-204ENST00000539721 ZBTB46Q86UZ6 589 aa14.35□□□□□ -0.11
TRAF3-204ENST00000539721 FAR1Q8WVX9 515 aa14.35□□□□□ -0.11
TRAF3-204ENST00000539721 VCX3AQ9NNX9 186 aa14.35□□□□□ -0.11
TRAF3-204ENST00000539721 ING1Q9UK53 422 aaPredicted RBP14.35□□□□□ -0.11
TRAF3-204ENST00000539721 DIMT1Q9UNQ2 313 aaKnown RBP14.35□□□□□ -0.11
TRAF3-204ENST00000539721 RCE1Q9Y256 329 aa14.35□□□□□ -0.11
TRAF3-204ENST00000539721 IGLV1-36A0A0B4J1U3 117 aa14.34□□□□□ -0.11
TRAF3-204ENST00000539721 CENPBD1B2RD01 187 aa14.34□□□□□ -0.11
TRAF3-204ENST00000539721 ADRA2AP08913 450 aa14.34□□□□□ -0.11
TRAF3-204ENST00000539721 FCGR2AP12318 317 aa14.34□□□□□ -0.11
TRAF3-204ENST00000539721 DCKP27707 260 aa14.34□□□□□ -0.11
TRAF3-204ENST00000539721 PTGS2P35354 604 aa14.34□□□□□ -0.11
TRAF3-204ENST00000539721 CSNK1A1P48729 337 aa14.34□□□□□ -0.11
TRAF3-204ENST00000539721 SELENOPP49908 381 aa14.34□□□□□ -0.11
TRAF3-204ENST00000539721 GGTLC2Q14390 218 aa14.34□□□□□ -0.11
TRAF3-204ENST00000539721 THEM4Q5T1C6 240 aa14.34□□□□□ -0.11
TRAF3-204ENST00000539721 AAED1Q7RTV5 226 aa14.34□□□□□ -0.11
TRAF3-204ENST00000539721 FGD2Q7Z6J4 655 aa14.34□□□□□ -0.11
TRAF3-204ENST00000539721 TMEM123Q8N131 208 aa14.34□□□□□ -0.11
TRAF3-204ENST00000539721 POMGNT2Q8NAT1 580 aa14.34□□□□□ -0.11
TRAF3-204ENST00000539721 OR6N1Q8NGY5 312 aa14.34□□□□□ -0.11
TRAF3-204ENST00000539721 FNDC8Q8TC99 324 aa14.34□□□□□ -0.11
TRAF3-204ENST00000539721 TRIB1Q96RU8 372 aa14.34□□□□□ -0.11
TRAF3-204ENST00000539721 CNN2Q99439 309 aaKnown RBP14.34□□□□□ -0.11
TRAF3-204ENST00000539721 RACGAP1Q9H0H5 632 aa14.34□□□□□ -0.11
TRAF3-204ENST00000539721 ADGRL4Q9HBW9 690 aa14.34□□□□□ -0.11
TRAF3-204ENST00000539721 ATMQ13315 3056 aa14.34□□□□□ -0.11
TRAF3-204ENST00000539721 SLC43A1O75387 559 aa14.34□□□□□ -0.11
TRAF3-204ENST00000539721 KHDRBS3O75525 346 aaKnown RBP14.34□□□□□ -0.11
TRAF3-204ENST00000539721 ZNF432O94892 652 aa14.34□□□□□ -0.11
TRAF3-204ENST00000539721 TGM6O95932 706 aa14.34□□□□□ -0.11
TRAF3-204ENST00000539721 SBK2P0C263 348 aa14.34□□□□□ -0.11
TRAF3-204ENST00000539721 SFTPCP11686 197 aa14.34□□□□□ -0.11
TRAF3-204ENST00000539721 NR2C1P13056 603 aa14.34□□□□□ -0.11
TRAF3-204ENST00000539721 MAP2K4P45985 399 aa14.34□□□□□ -0.11
TRAF3-204ENST00000539721 NEDD8Q15843 81 aa14.34□□□□□ -0.11
TRAF3-204ENST00000539721 ETFDHQ16134 617 aa14.34□□□□□ -0.11
TRAF3-204ENST00000539721 LYPD4Q6UWN0 246 aa14.34□□□□□ -0.11
TRAF3-204ENST00000539721 ADGRE4PQ86SQ3 457 aa14.34□□□□□ -0.11
TRAF3-204ENST00000539721 TMEM45BQ96B21 275 aa14.34□□□□□ -0.11
TRAF3-204ENST00000539721 SNRNP40Q96DI7 357 aaKnown RBP14.34□□□□□ -0.11
TRAF3-204ENST00000539721 FOXN4Q96NZ1 517 aa14.34□□□□□ -0.11
TRAF3-204ENST00000539721 CDCA4Q9BXL8 241 aa14.34□□□□□ -0.11
TRAF3-204ENST00000539721 TAS2R16Q9NYV7 291 aa14.34□□□□□ -0.11
TRAF3-204ENST00000539721 CLCF1Q9UBD9 225 aa14.34□□□□□ -0.11
TRAF3-204ENST00000539721 CLEC4AQ9UMR7 237 aa14.34□□□□□ -0.11
TRAF3-204ENST00000539721 COA3Q9Y2R0 106 aaPredicted RBP14.34□□□□□ -0.11
TRAF3-204ENST00000539721 NOSIPQ9Y314 301 aaKnown RBP14.34□□□□□ -0.11
TRAF3-204ENST00000539721 PCDHGB1Q9Y5G3 927 aa14.34□□□□□ -0.11
TRAF3-204ENST00000539721 PIEZO2Q9H5I5 2752 aa14.34□□□□□ -0.11
TRAF3-204ENST00000539721 IGKV1D-43A0A0B4J1Z2 117 aa14.33□□□□□ -0.12
TRAF3-204ENST00000539721 TVP23AA6NH52 213 aa14.33□□□□□ -0.12
TRAF3-204ENST00000539721 AHRRA9YTQ3 701 aa14.33□□□□□ -0.12
TRAF3-204ENST00000539721 GPANK1O95872 356 aa14.33□□□□□ -0.12
TRAF3-204ENST00000539721 HLA-DQA2P01906 255 aa14.33□□□□□ -0.12
TRAF3-204ENST00000539721 TFAP2AP05549 437 aa14.33□□□□□ -0.12
TRAF3-204ENST00000539721 MYL12AP19105 171 aa14.33□□□□□ -0.12
TRAF3-204ENST00000539721 NAA10P41227 235 aaPredicted RBP14.33□□□□□ -0.12
TRAF3-204ENST00000539721 TDGF1P3P51864 188 aa14.33□□□□□ -0.12
TRAF3-204ENST00000539721 NR1H2P55055 460 aa14.33□□□□□ -0.12
TRAF3-204ENST00000539721 EMX1Q04741 257 aaPredicted RBP14.33□□□□□ -0.12
TRAF3-204ENST00000539721 HIST3H3Q16695 136 aa14.33□□□□□ -0.12
TRAF3-204ENST00000539721 ZNF585AQ6P3V2 769 aa14.33□□□□□ -0.12
TRAF3-204ENST00000539721 TUSC5Q8IXB3 177 aa14.33□□□□□ -0.12
TRAF3-204ENST00000539721 ZNF511Q8NB15 262 aa14.33□□□□□ -0.12
TRAF3-204ENST00000539721 NSMAFQ92636 917 aa14.33□□□□□ -0.12
TRAF3-204ENST00000539721 TMEM54Q969K7 222 aa14.33□□□□□ -0.12
TRAF3-204ENST00000539721 MCHR2Q969V1 340 aa14.33□□□□□ -0.12
TRAF3-204ENST00000539721 NMD3Q96D46 503 aaKnown RBP14.33□□□□□ -0.12
TRAF3-204ENST00000539721 RNF122Q9H9V4 155 aa14.33□□□□□ -0.12
TRAF3-204ENST00000539721 CALHM2Q9HA72 323 aa14.33□□□□□ -0.12
TRAF3-204ENST00000539721 BCO1Q9HAY6 547 aa14.33□□□□□ -0.12
TRAF3-204ENST00000539721 CHCHD3Q9NX63 227 aaKnown RBP14.33□□□□□ -0.12
TRAF3-204ENST00000539721 GLTPQ9NZD2 209 aa14.33□□□□□ -0.12
TRAF3-204ENST00000539721 EXOSC1Q9Y3B2 195 aaKnown RBP14.33□□□□□ -0.12
TRAF3-204ENST00000539721 ZNF724A8MTY0 619 aa14.32□□□□□ -0.12
TRAF3-204ENST00000539721 SELENOFO60613 162 aa14.32□□□□□ -0.12
TRAF3-204ENST00000539721 IGHA1P01876 353 aa14.32□□□□□ -0.12
TRAF3-204ENST00000539721 TPOP07202 933 aa14.32□□□□□ -0.12
TRAF3-204ENST00000539721 YES1P07947 543 aa14.32□□□□□ -0.12
TRAF3-204ENST00000539721 QDPRP09417 244 aa14.32□□□□□ -0.12
TRAF3-204ENST00000539721 PCMT1P22061 227 aa14.32□□□□□ -0.12
TRAF3-204ENST00000539721 BLVRAP53004 296 aa14.32□□□□□ -0.12
TRAF3-204ENST00000539721 GLO1Q04760 184 aa14.32□□□□□ -0.12
TRAF3-204ENST00000539721 IRF3Q14653 427 aa14.32□□□□□ -0.12
TRAF3-204ENST00000539721 PRR30Q53SZ7 412 aaPredicted RBP14.32□□□□□ -0.12
TRAF3-204ENST00000539721 ERI1Q8IV48 349 aaKnown RBP14.32□□□□□ -0.12
TRAF3-204ENST00000539721 C20orf196Q8IYI0 205 aa14.32□□□□□ -0.12
TRAF3-204ENST00000539721 OR10H4Q8NGA5 316 aa14.32□□□□□ -0.12
TRAF3-204ENST00000539721 INTS12Q96CB8 462 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms