RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 OR14A2Q96R54 314 aa18.23■□□□□ 0.51
PACSIN3-211ENST00000539589 INTS14Q96SY0 518 aa18.23■□□□□ 0.51
PACSIN3-211ENST00000539589 MFRPQ9BY79 579 aa18.23■□□□□ 0.51
PACSIN3-211ENST00000539589 KLRF1Q9NZS2 232 aa18.23■□□□□ 0.51
PACSIN3-211ENST00000539589 MED11Q9P086 117 aa18.23■□□□□ 0.51
PACSIN3-211ENST00000539589 EXTL2Q9UBQ6 330 aa18.23■□□□□ 0.51
PACSIN3-211ENST00000539589 KLHDC2Q9Y2U9 406 aa18.23■□□□□ 0.51
PACSIN3-211ENST00000539589 FKBP7Q9Y680 259 aa18.23■□□□□ 0.51
PACSIN3-211ENST00000539589 NOTOA8MTQ0 251 aa18.22■□□□□ 0.51
PACSIN3-211ENST00000539589 HLA-DQB1P01920 261 aa18.22■□□□□ 0.51
PACSIN3-211ENST00000539589 HSD17B12Q53GQ0 312 aa18.22■□□□□ 0.51
PACSIN3-211ENST00000539589 YIF1BQ5BJH7 314 aa18.22■□□□□ 0.51
PACSIN3-211ENST00000539589 YIPF7Q8N8F6 280 aa18.22■□□□□ 0.51
PACSIN3-211ENST00000539589 SAMD12Q8N8I0 201 aa18.22■□□□□ 0.51
PACSIN3-211ENST00000539589 OR6N2Q8NGY6 317 aa18.22■□□□□ 0.51
PACSIN3-211ENST00000539589 ZNF417Q8TAU3 575 aa18.22■□□□□ 0.51
PACSIN3-211ENST00000539589 ZNF519Q8TB69 540 aa18.22■□□□□ 0.51
PACSIN3-211ENST00000539589 NEDD4LQ96PU5 975 aa18.22■□□□□ 0.51
PACSIN3-211ENST00000539589 ZNF587Q96SQ5 575 aaPredicted RBP18.22■□□□□ 0.51
PACSIN3-211ENST00000539589 MRM2Q9UI43 246 aaKnown RBP18.22■□□□□ 0.51
PACSIN3-211ENST00000539589 IGHMP01871 453 aa18.22■□□□□ 0.51
PACSIN3-211ENST00000539589 OR8G3PP0DMU2 310 aa18.22■□□□□ 0.51
PACSIN3-211ENST00000539589 MSX1P28360 303 aa18.22■□□□□ 0.51
PACSIN3-211ENST00000539589 DLX5P56178 289 aa18.22■□□□□ 0.51
PACSIN3-211ENST00000539589 MFSD13AQ14CX5 517 aa18.22■□□□□ 0.51
PACSIN3-211ENST00000539589 SLC25A35Q3KQZ1 300 aa18.22■□□□□ 0.51
PACSIN3-211ENST00000539589 ZNF248Q8NDW4 579 aa18.22■□□□□ 0.51
PACSIN3-211ENST00000539589 SPACA9Q96E40 222 aaPredicted RBP18.22■□□□□ 0.51
PACSIN3-211ENST00000539589 C11orf54Q9H0W9 315 aaPredicted RBP18.22■□□□□ 0.51
PACSIN3-211ENST00000539589 CDCP1Q9H5V8 836 aa18.22■□□□□ 0.51
PACSIN3-211ENST00000539589 SDHAF3Q9NRP4 125 aa18.22■□□□□ 0.51
PACSIN3-211ENST00000539589 ASPMQ8IZT6 3477 aa18.21■□□□□ 0.51
PACSIN3-211ENST00000539589 PHYHO14832 338 aa18.21■□□□□ 0.51
PACSIN3-211ENST00000539589 AKR7A3O95154 331 aa18.21■□□□□ 0.51
PACSIN3-211ENST00000539589 NPR2P20594 1047 aa18.21■□□□□ 0.51
PACSIN3-211ENST00000539589 CSRP1P21291 193 aaKnown RBP18.21■□□□□ 0.51
PACSIN3-211ENST00000539589 CENPAP49450 140 aa18.21■□□□□ 0.51
PACSIN3-211ENST00000539589 EIF2B2P49770 351 aaKnown RBP18.21■□□□□ 0.51
PACSIN3-211ENST00000539589 BLVRAP53004 296 aa18.21■□□□□ 0.51
PACSIN3-211ENST00000539589 NANOS3P60323 173 aaKnown RBP18.21■□□□□ 0.51
PACSIN3-211ENST00000539589 EGR3Q06889 387 aa18.21■□□□□ 0.51
PACSIN3-211ENST00000539589 CARTPTQ16568 116 aa18.21■□□□□ 0.51
PACSIN3-211ENST00000539589 LIPNQ5VXI9 398 aa18.21■□□□□ 0.51
PACSIN3-211ENST00000539589 IL20RBQ6UXL0 311 aa18.21■□□□□ 0.51
PACSIN3-211ENST00000539589 AKAP14Q86UN6 197 aa18.21■□□□□ 0.51
PACSIN3-211ENST00000539589 RAB43Q86YS6 212 aa18.21■□□□□ 0.51
PACSIN3-211ENST00000539589 TRMT10AQ8TBZ6 339 aaKnown RBP18.21■□□□□ 0.51
PACSIN3-211ENST00000539589 CHAC2Q8WUX2 184 aa18.21■□□□□ 0.51
PACSIN3-211ENST00000539589 VSX1Q9NZR4 365 aaPredicted RBP18.21■□□□□ 0.51
PACSIN3-211ENST00000539589 PPP4R1LQ9P1A2 415 aa18.21■□□□□ 0.51
PACSIN3-211ENST00000539589 TEKT2Q9UIF3 430 aa18.21■□□□□ 0.51
PACSIN3-211ENST00000539589 B9D1Q9UPM9 204 aa18.21■□□□□ 0.51
PACSIN3-211ENST00000539589 MED13Q9UHV7 2174 aa18.2■□□□□ 0.5
PACSIN3-211ENST00000539589 C21orf140B9A014 251 aa18.2■□□□□ 0.5
PACSIN3-211ENST00000539589 FTCDNL1E5RQL4 147 aa18.2■□□□□ 0.5
PACSIN3-211ENST00000539589 UPK3AO75631 287 aa18.2■□□□□ 0.5
PACSIN3-211ENST00000539589 RPP14O95059 124 aaKnown RBP18.2■□□□□ 0.5
PACSIN3-211ENST00000539589 ZFPL1O95159 310 aa18.2■□□□□ 0.5
PACSIN3-211ENST00000539589 ALOX5APP20292 161 aa18.2■□□□□ 0.5
PACSIN3-211ENST00000539589 OR2B6P58173 313 aa18.2■□□□□ 0.5
PACSIN3-211ENST00000539589 GABREP78334 506 aa18.2■□□□□ 0.5
PACSIN3-211ENST00000539589 ARSKQ6UWY0 536 aa18.2■□□□□ 0.5
PACSIN3-211ENST00000539589 DPY19L4Q7Z388 723 aa18.2■□□□□ 0.5
PACSIN3-211ENST00000539589 TMPRSS12Q86WS5 348 aa18.2■□□□□ 0.5
PACSIN3-211ENST00000539589 RNF166Q96A37 237 aaPredicted RBP18.2■□□□□ 0.5
PACSIN3-211ENST00000539589 GPR87Q9BY21 358 aa18.2■□□□□ 0.5
PACSIN3-211ENST00000539589 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.2■□□□□ 0.5
PACSIN3-211ENST00000539589 ZCCHC4Q9H5U6 513 aa18.2■□□□□ 0.5
PACSIN3-211ENST00000539589 B3GAT2Q9NPZ5 323 aa18.2■□□□□ 0.5
PACSIN3-211ENST00000539589 SACM1LQ9NTJ5 587 aa18.2■□□□□ 0.5
PACSIN3-211ENST00000539589 P4HTMQ9NXG6 502 aa18.2■□□□□ 0.5
PACSIN3-211ENST00000539589 ABRACLQ9P1F3 81 aa18.2■□□□□ 0.5
PACSIN3-211ENST00000539589 IKZF2Q9UKS7 526 aa18.2■□□□□ 0.5
PACSIN3-211ENST00000539589 PROB1E7EW31 1015 aa18.2■□□□□ 0.5
PACSIN3-211ENST00000539589 PLA2G10O15496 165 aa18.2■□□□□ 0.5
PACSIN3-211ENST00000539589 ZNF208O43345 1280 aa18.2■□□□□ 0.5
PACSIN3-211ENST00000539589 ABHD16AO95870 558 aa18.2■□□□□ 0.5
PACSIN3-211ENST00000539589 EIF4EP06730 217 aaKnown RBP18.2■□□□□ 0.5
PACSIN3-211ENST00000539589 EPXP11678 715 aa18.2■□□□□ 0.5
PACSIN3-211ENST00000539589 PTPRZ1P23471 2315 aaPredicted RBP18.2■□□□□ 0.5
PACSIN3-211ENST00000539589 RBMS1P29558 406 aaKnown RBP18.2■□□□□ 0.5
PACSIN3-211ENST00000539589 CEP78Q5JTW2 689 aa18.2■□□□□ 0.5
PACSIN3-211ENST00000539589 MFSD8Q8NHS3 518 aa18.2■□□□□ 0.5
PACSIN3-211ENST00000539589 THEM6Q8WUY1 208 aa18.2■□□□□ 0.5
PACSIN3-211ENST00000539589 DDIT4LQ96D03 193 aa18.2■□□□□ 0.5
PACSIN3-211ENST00000539589 NXPE2Q96DL1 559 aa18.2■□□□□ 0.5
PACSIN3-211ENST00000539589 NPAS1Q99742 590 aa18.2■□□□□ 0.5
PACSIN3-211ENST00000539589 B3GNT4Q9C0J1 378 aa18.2■□□□□ 0.5
PACSIN3-211ENST00000539589 METTL7AQ9H8H3 244 aa18.2■□□□□ 0.5
PACSIN3-211ENST00000539589 NOX4Q9NPH5 578 aa18.2■□□□□ 0.5
PACSIN3-211ENST00000539589 NPAP1Q9NZP6 1156 aa18.2■□□□□ 0.5
PACSIN3-211ENST00000539589 IL17BQ9UHF5 180 aa18.2■□□□□ 0.5
PACSIN3-211ENST00000539589 VDAC3Q9Y277 283 aa18.2■□□□□ 0.5
PACSIN3-211ENST00000539589 STMND1H3BQB6 276 aa18.19■□□□□ 0.5
PACSIN3-211ENST00000539589 HPP00738 406 aa18.19■□□□□ 0.5
PACSIN3-211ENST00000539589 HLA-DQA2P01906 255 aa18.19■□□□□ 0.5
PACSIN3-211ENST00000539589 SRMP19623 302 aa18.19■□□□□ 0.5
PACSIN3-211ENST00000539589 INPP1P49441 399 aa18.19■□□□□ 0.5
PACSIN3-211ENST00000539589 MAP2K6P52564 334 aa18.19■□□□□ 0.5
PACSIN3-211ENST00000539589 TPTEP56180 551 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms