RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 UBE2IP63279 158 aaKnown RBP8.76□□□□□ -1.01
CDH13-204ENST00000539548 GUCA2AQ02747 115 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 FUT7Q11130 342 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 TOMM20Q15388 145 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 C2orf76Q3KRA6 126 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 EEF1A1P5Q5VTE0 462 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 FNDC7Q5VTL7 733 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 NUP54Q7Z3B4 507 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 OR1S1Q8NH92 325 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 C16orf52Q8NHV5 167 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 TNFAIP8L1Q8WVP5 186 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 OIT3Q8WWZ8 545 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 PATE1Q8WXA2 126 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 BADQ92934 168 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 C4orf45Q96LM5 186 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 LPAR4Q99677 370 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 KXD1Q9BQD3 176 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 FAM60AQ9NP50 221 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 CDV3Q9UKY7 258 aaKnown RBP8.76□□□□□ -1.01
CDH13-204ENST00000539548 ERVK-19Q9WJR5 959 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 LRP4O75096 1905 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 DOCK8Q8NF50 2099 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 TMEM272A0A1B0GTI8 110 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 RFPL4AA6NLU0 287 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 TTLL8A6PVC2 850 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 RFPL4AL1F8VTS6 287 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 SULT1C2O00338 296 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 SLC17A2O00624 439 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 TOR1AO14656 332 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 CDC40O60508 579 aaKnown RBP eCLIP8.76□□□□□ -1.01
CDH13-204ENST00000539548 TSPAN9O75954 239 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 PMS2P2O95744 297 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 HPP00738 406 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 RENP00797 406 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 F13BP05160 661 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 POU3F4P49335 361 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 EGR4Q05215 589 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 RPL18Q07020 188 aaKnown RBP8.76□□□□□ -1.01
CDH13-204ENST00000539548 EIF2B5Q13144 721 aaKnown RBP8.76□□□□□ -1.01
CDH13-204ENST00000539548 GPM6BQ13491 265 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 GRM7Q14831 915 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 MESTQ5EB52 335 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 FAM166AQ6J272 317 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 STEAP1BQ6NZ63 245 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 DPY19L4Q7Z388 723 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 BIVMQ86UB2 503 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 IQCF2Q8IXL9 164 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 STPG2Q8N412 459 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 ZNF454Q8N9F8 522 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 CLEC1AQ8NC01 280 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 OR51A4Q8NGJ6 313 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 OR6N2Q8NGY6 317 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 OR8K3Q8NH51 312 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 GPX8Q8TED1 209 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 FAM3DQ96BQ1 224 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 DGAT2Q96PD7 388 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 TSPAN32Q96QS1 320 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 INTS14Q96SY0 518 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 ARPC5LQ9BPX5 153 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 CHST6Q9GZX3 395 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 MFFQ9GZY8 342 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 OR10A5Q9H207 317 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 SLC25A32Q9H2D1 315 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 EXO5Q9H790 373 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 MYOZ1Q9NP98 299 aaPredicted RBP8.76□□□□□ -1.01
CDH13-204ENST00000539548 TMEM138Q9NPI0 162 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 PRTFDC1Q9NRG1 225 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 UPB1Q9UBR1 384 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 EPHA6Q9UF33 1036 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 MRPS33Q9Y291 106 aaKnown RBP8.76□□□□□ -1.01
CDH13-204ENST00000539548 CLDN16Q9Y5I7 305 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 A0A0A6YYC8 382 aaPredicted RBP8.75□□□□□ -1.01
CDH13-204ENST00000539548 LOC100289279A0A1B0GTE1 492 aa8.75□□□□□ -1.01
CDH13-204ENST00000539548 CHURC1-FNTBB4DL54 471 aa8.75□□□□□ -1.01
CDH13-204ENST00000539548 ATP6V1G2-DDX39BF2Z307 99 aa8.75□□□□□ -1.01
CDH13-204ENST00000539548 H3BUI4 141 aa8.75□□□□□ -1.01
CDH13-204ENST00000539548 I3L1I5 382 aaPredicted RBP8.75□□□□□ -1.01
CDH13-204ENST00000539548 OIP5O43482 229 aa8.75□□□□□ -1.01
CDH13-204ENST00000539548 SDC3O75056 442 aa8.75□□□□□ -1.01
CDH13-204ENST00000539548 WNT11O96014 354 aa8.75□□□□□ -1.01
CDH13-204ENST00000539548 CD3DP04234 171 aa8.75□□□□□ -1.01
CDH13-204ENST00000539548 CTSBP07858 339 aa8.75□□□□□ -1.01
CDH13-204ENST00000539548 MYOGP15173 224 aa8.75□□□□□ -1.01
CDH13-204ENST00000539548 HNRNPA2B1P22626 353 aaKnown RBP8.75□□□□□ -1.01
CDH13-204ENST00000539548 MAZP56270 477 aaKnown RBP8.75□□□□□ -1.01
CDH13-204ENST00000539548 UBE2MP61081 183 aaKnown RBP8.75□□□□□ -1.01
CDH13-204ENST00000539548 YPEL5P62699 121 aa8.75□□□□□ -1.01
CDH13-204ENST00000539548 SORDQ00796 357 aa8.75□□□□□ -1.01
CDH13-204ENST00000539548 SRSF5Q13243 272 aaKnown RBP8.75□□□□□ -1.01
CDH13-204ENST00000539548 SKP2Q13309 424 aa8.75□□□□□ -1.01
CDH13-204ENST00000539548 RAB11BQ15907 218 aa8.75□□□□□ -1.01
CDH13-204ENST00000539548 NNATQ16517 81 aa8.75□□□□□ -1.01
CDH13-204ENST00000539548 C4orf46Q504U0 113 aa8.75□□□□□ -1.01
CDH13-204ENST00000539548 YOD1Q5VVQ6 348 aaPredicted RBP8.75□□□□□ -1.01
CDH13-204ENST00000539548 OOSP2Q86WS3 158 aa8.75□□□□□ -1.01
CDH13-204ENST00000539548 ZNF615Q8N8J6 731 aa8.75□□□□□ -1.01
CDH13-204ENST00000539548 GPBAR1Q8TDU6 330 aa8.75□□□□□ -1.01
CDH13-204ENST00000539548 CCDC107Q8WV48 283 aa8.75□□□□□ -1.01
CDH13-204ENST00000539548 HERVK_113Q902F9 699 aa8.75□□□□□ -1.01
CDH13-204ENST00000539548 EDAQ92838 391 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms