RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 TAGLN2P37802 199 aaKnown RBP4.22□□□□□ -1.73
TRAV11-201ENST00000539512 RPS21P63220 83 aaKnown RBP4.22□□□□□ -1.73
TRAV11-201ENST00000539512 PAX5Q02548 391 aa4.22□□□□□ -1.73
TRAV11-201ENST00000539512 ECH1Q13011 328 aa4.22□□□□□ -1.73
TRAV11-201ENST00000539512 KCTD19Q17RG1 926 aaPredicted RBP4.22□□□□□ -1.73
TRAV11-201ENST00000539512 VPS26BQ4G0F5 336 aa4.22□□□□□ -1.73
TRAV11-201ENST00000539512 TFDP3Q5H9I0 405 aa4.22□□□□□ -1.73
TRAV11-201ENST00000539512 TMEM255AQ5JRV8 349 aa4.22□□□□□ -1.73
TRAV11-201ENST00000539512 OAFQ86UD1 273 aa4.22□□□□□ -1.73
TRAV11-201ENST00000539512 PCP2Q8IVA1 136 aa4.22□□□□□ -1.73
TRAV11-201ENST00000539512 SLC2A14Q8TDB8 520 aa4.22□□□□□ -1.73
TRAV11-201ENST00000539512 GIMAP1Q8WWP7 306 aa4.22□□□□□ -1.73
TRAV11-201ENST00000539512 SAMSN1Q9NSI8 373 aaKnown RBP4.22□□□□□ -1.73
TRAV11-201ENST00000539512 A0A096LNJ9 63 aa4.21□□□□□ -1.74
TRAV11-201ENST00000539512 A0A1B0GVI7 797 aa4.21□□□□□ -1.74
TRAV11-201ENST00000539512 ERVV-1B6SEH8 477 aa4.21□□□□□ -1.74
TRAV11-201ENST00000539512 SNAI2O43623 268 aa4.21□□□□□ -1.74
TRAV11-201ENST00000539512 FGGP02679 453 aa4.21□□□□□ -1.74
TRAV11-201ENST00000539512 SERPINB5P36952 375 aa4.21□□□□□ -1.74
TRAV11-201ENST00000539512 TFPI2P48307 235 aa4.21□□□□□ -1.74
TRAV11-201ENST00000539512 CYB561P49447 251 aa4.21□□□□□ -1.74
TRAV11-201ENST00000539512 CLINT1Q14677 625 aa4.21□□□□□ -1.74
TRAV11-201ENST00000539512 RABL6Q3YEC7 729 aaPredicted RBP4.21□□□□□ -1.74
TRAV11-201ENST00000539512 SLC25A48Q6ZT89 311 aaKnown RBP4.21□□□□□ -1.74
TRAV11-201ENST00000539512 FAM228AQ86W67 206 aa4.21□□□□□ -1.74
TRAV11-201ENST00000539512 OR2L3Q8NG85 312 aa4.21□□□□□ -1.74
TRAV11-201ENST00000539512 GPR151Q8TDV0 419 aa4.21□□□□□ -1.74
TRAV11-201ENST00000539512 FAM104AQ969W3 186 aa4.21□□□□□ -1.74
TRAV11-201ENST00000539512 BMFQ96LC9 184 aa4.21□□□□□ -1.74
TRAV11-201ENST00000539512 P2RX4Q99571 388 aa4.21□□□□□ -1.74
TRAV11-201ENST00000539512 TCHPQ9BT92 498 aa4.21□□□□□ -1.74
TRAV11-201ENST00000539512 ILKAPQ9H0C8 392 aaPredicted RBP4.21□□□□□ -1.74
TRAV11-201ENST00000539512 UGT1A7Q9HAW7 530 aa4.21□□□□□ -1.74
TRAV11-201ENST00000539512 UGT1A10Q9HAW8 530 aa4.21□□□□□ -1.74
TRAV11-201ENST00000539512 UGT1A8Q9HAW9 530 aa4.21□□□□□ -1.74
TRAV11-201ENST00000539512 CD84Q9UIB8 345 aa4.21□□□□□ -1.74
TRAV11-201ENST00000539512 KIAA1257Q9ULG3 409 aa4.21□□□□□ -1.74
TRAV11-201ENST00000539512 RIMBP3CA6NJZ7 1639 aa4.21□□□□□ -1.74
TRAV11-201ENST00000539512 RIMBP3BA6NNM3 1639 aa4.21□□□□□ -1.74
TRAV11-201ENST00000539512 NESP48681 1621 aa4.21□□□□□ -1.74
TRAV11-201ENST00000539512 RIMBP3Q9UFD9 1639 aa4.21□□□□□ -1.74
TRAV11-201ENST00000539512 KMOO15229 486 aa4.2□□□□□ -1.74
TRAV11-201ENST00000539512 SNX4O95219 450 aa4.2□□□□□ -1.74
TRAV11-201ENST00000539512 CRISP3P54108 245 aa4.2□□□□□ -1.74
TRAV11-201ENST00000539512 ENPEPQ07075 957 aa4.2□□□□□ -1.74
TRAV11-201ENST00000539512 ABHD13Q7L211 337 aa4.2□□□□□ -1.74
TRAV11-201ENST00000539512 STRADAQ7RTN6 431 aa4.2□□□□□ -1.74
TRAV11-201ENST00000539512 SLC22A9Q8IVM8 553 aa4.2□□□□□ -1.74
TRAV11-201ENST00000539512 PDIK1LQ8N165 341 aa4.2□□□□□ -1.74
TRAV11-201ENST00000539512 LIX1Q8N485 282 aa4.2□□□□□ -1.74
TRAV11-201ENST00000539512 STARD8Q92502 1023 aa4.2□□□□□ -1.74
TRAV11-201ENST00000539512 N4BP2L2Q92802 583 aaPredicted RBP4.2□□□□□ -1.74
TRAV11-201ENST00000539512 TMEM54Q969K7 222 aa4.2□□□□□ -1.74
TRAV11-201ENST00000539512 RPF2Q9H7B2 306 aaKnown RBP4.2□□□□□ -1.74
TRAV11-201ENST00000539512 PSG11Q9UQ72 335 aa4.2□□□□□ -1.74
TRAV11-201ENST00000539512 STARD10Q9Y365 291 aa4.2□□□□□ -1.74
TRAV11-201ENST00000539512 RAI1Q7Z5J4 1906 aaPredicted RBP4.19□□□□□ -1.74
TRAV11-201ENST00000539512 IGKV2D-24A0A075B6R9 120 aa4.19□□□□□ -1.74
TRAV11-201ENST00000539512 IGKV1D-13A0A0B4J2D9 117 aa4.19□□□□□ -1.74
TRAV11-201ENST00000539512 HEATR9A2RTY3 570 aa4.19□□□□□ -1.74
TRAV11-201ENST00000539512 UBXN8O00124 270 aa4.19□□□□□ -1.74
TRAV11-201ENST00000539512 UQCRFS1P1P0C7P4 283 aa4.19□□□□□ -1.74
TRAV11-201ENST00000539512 IGKV1-13P0DP09 117 aa4.19□□□□□ -1.74
TRAV11-201ENST00000539512 ZNF24P17028 368 aa4.19□□□□□ -1.74
TRAV11-201ENST00000539512 HNRNPH3P31942 346 aaKnown RBP4.19□□□□□ -1.74
TRAV11-201ENST00000539512 SLC7A9P82251 487 aa4.19□□□□□ -1.74
TRAV11-201ENST00000539512 B3GNT7Q8NFL0 401 aa4.19□□□□□ -1.74
TRAV11-201ENST00000539512 PLPPR1Q8TBJ4 325 aa4.19□□□□□ -1.74
TRAV11-201ENST00000539512 CCDC126Q96EE4 140 aa4.19□□□□□ -1.74
TRAV11-201ENST00000539512 PIK3IP1Q96FE7 263 aa4.19□□□□□ -1.74
TRAV11-201ENST00000539512 CENPKQ9BS16 269 aa4.19□□□□□ -1.74
TRAV11-201ENST00000539512 TPK1Q9H3S4 243 aa4.19□□□□□ -1.74
TRAV11-201ENST00000539512 PATZ1Q9HBE1 687 aaKnown RBP4.19□□□□□ -1.74
TRAV11-201ENST00000539512 RBAKQ9NYW8 714 aaPredicted RBP4.19□□□□□ -1.74
TRAV11-201ENST00000539512 TBX21Q9UL17 535 aa4.19□□□□□ -1.74
TRAV11-201ENST00000539512 TRAV39A0A0B4J263 110 aa4.18□□□□□ -1.74
TRAV11-201ENST00000539512 SMCO3A2RU48 225 aa4.18□□□□□ -1.74
TRAV11-201ENST00000539512 ZNF726A6NNF4 738 aa4.18□□□□□ -1.74
TRAV11-201ENST00000539512 HIDE1A8MVS5 230 aa4.18□□□□□ -1.74
TRAV11-201ENST00000539512 CDC7O00311 574 aa4.18□□□□□ -1.74
TRAV11-201ENST00000539512 EEDO75530 441 aaKnown RBP4.18□□□□□ -1.74
TRAV11-201ENST00000539512 RPS9P46781 194 aaKnown RBP4.18□□□□□ -1.74
TRAV11-201ENST00000539512 NCBP2P52298 156 aaKnown RBP eCLIP4.18□□□□□ -1.74
TRAV11-201ENST00000539512 GPX6P59796 221 aa4.18□□□□□ -1.74
TRAV11-201ENST00000539512 PFN3P60673 137 aa4.18□□□□□ -1.74
TRAV11-201ENST00000539512 TWF1Q12792 350 aa4.18□□□□□ -1.74
TRAV11-201ENST00000539512 C16orf72Q14CZ0 275 aa4.18□□□□□ -1.74
TRAV11-201ENST00000539512 PTGES3Q15185 160 aaKnown RBP4.18□□□□□ -1.74
TRAV11-201ENST00000539512 LINC00173Q6ZV60 143 aa4.18□□□□□ -1.74
TRAV11-201ENST00000539512 OR56B2PQ8NGI1 322 aa4.18□□□□□ -1.74
TRAV11-201ENST00000539512 ZNF596Q8TC21 504 aa4.18□□□□□ -1.74
TRAV11-201ENST00000539512 GOLT1BQ9Y3E0 138 aa4.18□□□□□ -1.74
TRAV11-201ENST00000539512 SMARCA2P51531 1590 aa4.18□□□□□ -1.74
TRAV11-201ENST00000539512 CENPJQ9HC77 1338 aaPredicted RBP4.18□□□□□ -1.74
TRAV11-201ENST00000539512 ARHGEF11O15085 1522 aa4.17□□□□□ -1.74
TRAV11-201ENST00000539512 ANKRD63C9JTQ0 380 aa4.17□□□□□ -1.74
TRAV11-201ENST00000539512 F6UB75 175 aa4.17□□□□□ -1.74
TRAV11-201ENST00000539512 ANGPTL7O43827 346 aa4.17□□□□□ -1.74
TRAV11-201ENST00000539512 CD5LO43866 347 aa4.17□□□□□ -1.74
TRAV11-201ENST00000539512 CST1P01037 141 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms