RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 PCDHAC1Q9H158 963 aa10.73□□□□□ -0.69
VAMP1-206ENST00000538970 KAT8Q9H7Z6 458 aaKnown RBP10.73□□□□□ -0.69
VAMP1-206ENST00000538970 NANSQ9NR45 359 aa10.73□□□□□ -0.69
VAMP1-206ENST00000538970 SLC7A7Q9UM01 511 aa10.73□□□□□ -0.69
VAMP1-206ENST00000538970 NDUFAF1Q9Y375 327 aa10.73□□□□□ -0.69
VAMP1-206ENST00000538970 A0A1W2PPW3 197 aa10.72□□□□□ -0.69
VAMP1-206ENST00000538970 TRAPPC13A5PLN9 417 aa10.72□□□□□ -0.69
VAMP1-206ENST00000538970 B4DSR2 109 aa10.72□□□□□ -0.69
VAMP1-206ENST00000538970 FAM157AC9JC47 383 aa10.72□□□□□ -0.69
VAMP1-206ENST00000538970 ANGPT2O15123 496 aa10.72□□□□□ -0.69
VAMP1-206ENST00000538970 DHHO43323 396 aa10.72□□□□□ -0.69
VAMP1-206ENST00000538970 RNF13O43567 381 aa10.72□□□□□ -0.69
VAMP1-206ENST00000538970 ENTPD5O75356 428 aa10.72□□□□□ -0.69
VAMP1-206ENST00000538970 ASAH2BP0C7U1 165 aa10.72□□□□□ -0.69
VAMP1-206ENST00000538970 OR8G3PP0DMU2 310 aa10.72□□□□□ -0.69
VAMP1-206ENST00000538970 SAGP10523 405 aaPredicted RBP10.72□□□□□ -0.69
VAMP1-206ENST00000538970 NAT2P11245 290 aa10.72□□□□□ -0.69
VAMP1-206ENST00000538970 ITGA2P17301 1181 aa10.72□□□□□ -0.69
VAMP1-206ENST00000538970 PCMT1P22061 227 aa10.72□□□□□ -0.69
VAMP1-206ENST00000538970 PCGF2P35227 344 aa10.72□□□□□ -0.69
VAMP1-206ENST00000538970 CRYBA2P53672 197 aa10.72□□□□□ -0.69
VAMP1-206ENST00000538970 MRPS11P82912 194 aaKnown RBP10.72□□□□□ -0.69
VAMP1-206ENST00000538970 PATL1Q86TB9 770 aaKnown RBP10.72□□□□□ -0.69
VAMP1-206ENST00000538970 GLCCI1Q86VQ1 547 aa10.72□□□□□ -0.69
VAMP1-206ENST00000538970 SLC30A8Q8IWU4 369 aa10.72□□□□□ -0.69
VAMP1-206ENST00000538970 PAQR4Q8N4S7 273 aaPredicted RBP10.72□□□□□ -0.69
VAMP1-206ENST00000538970 SLC30A7Q8NEW0 376 aa10.72□□□□□ -0.69
VAMP1-206ENST00000538970 DYDC1Q8WWB3 177 aa10.72□□□□□ -0.69
VAMP1-206ENST00000538970 YIPF5Q969M3 257 aa10.72□□□□□ -0.69
VAMP1-206ENST00000538970 MPP4Q96JB8 637 aa10.72□□□□□ -0.69
VAMP1-206ENST00000538970 SH3GL3Q99963 347 aa10.72□□□□□ -0.69
VAMP1-206ENST00000538970 NARFLQ9H6Q4 476 aa10.72□□□□□ -0.69
VAMP1-206ENST00000538970 ZNF275Q9NSD4 429 aaPredicted RBP10.72□□□□□ -0.69
VAMP1-206ENST00000538970 DUSP13Q9UII6 198 aa10.72□□□□□ -0.69
VAMP1-206ENST00000538970 IGLV3-9A0A075B6K5 115 aa10.71□□□□□ -0.69
VAMP1-206ENST00000538970 WNT9BO14905 357 aa10.71□□□□□ -0.69
VAMP1-206ENST00000538970 RP2O75695 350 aa10.71□□□□□ -0.69
VAMP1-206ENST00000538970 FARS2O95363 451 aaKnown RBP10.71□□□□□ -0.69
VAMP1-206ENST00000538970 TFP02787 698 aa10.71□□□□□ -0.69
VAMP1-206ENST00000538970 QDPRP09417 244 aa10.71□□□□□ -0.69
VAMP1-206ENST00000538970 FAM157BP0CG42 384 aa10.71□□□□□ -0.69
VAMP1-206ENST00000538970 UMPSP11172 480 aa10.71□□□□□ -0.69
VAMP1-206ENST00000538970 NFYCQ13952 458 aa10.71□□□□□ -0.69
VAMP1-206ENST00000538970 HIST3H3Q16695 136 aa10.71□□□□□ -0.69
VAMP1-206ENST00000538970 NRN1LQ496H8 165 aa10.71□□□□□ -0.69
VAMP1-206ENST00000538970 RGS7BPQ6MZT1 257 aaPredicted RBP10.71□□□□□ -0.69
VAMP1-206ENST00000538970 NANOGNBQ7Z5D8 188 aa10.71□□□□□ -0.69
VAMP1-206ENST00000538970 DPPA2Q7Z7J5 298 aa10.71□□□□□ -0.69
VAMP1-206ENST00000538970 OR4K5Q8NGD3 323 aa10.71□□□□□ -0.69
VAMP1-206ENST00000538970 THOC1Q96FV9 657 aaKnown RBP10.71□□□□□ -0.69
VAMP1-206ENST00000538970 SEPHS2Q99611 448 aa10.71□□□□□ -0.69
VAMP1-206ENST00000538970 PRSS27Q9BQR3 290 aa10.71□□□□□ -0.69
VAMP1-206ENST00000538970 C1orf198Q9H425 327 aa10.71□□□□□ -0.69
VAMP1-206ENST00000538970 MEPEQ9NQ76 525 aaPredicted RBP10.71□□□□□ -0.69
VAMP1-206ENST00000538970 ZNF346Q9UL40 294 aaKnown RBP10.71□□□□□ -0.69
VAMP1-206ENST00000538970 TRIM33Q9UPN9 1127 aa10.71□□□□□ -0.69
VAMP1-206ENST00000538970 SLC22A23A1A5C7 686 aa10.7□□□□□ -0.7
VAMP1-206ENST00000538970 SNAP29O95721 258 aa10.7□□□□□ -0.7
VAMP1-206ENST00000538970 BCL10O95999 233 aa10.7□□□□□ -0.7
VAMP1-206ENST00000538970 CLPTM1O96005 669 aa10.7□□□□□ -0.7
VAMP1-206ENST00000538970 IGHG1P01857 330 aa10.7□□□□□ -0.7
VAMP1-206ENST00000538970 HIST1H2ABP04908 130 aa10.7□□□□□ -0.7
VAMP1-206ENST00000538970 MSMBP08118 114 aa10.7□□□□□ -0.7
VAMP1-206ENST00000538970 CCL2P13500 99 aa10.7□□□□□ -0.7
VAMP1-206ENST00000538970 ZNF250P15622 560 aa10.7□□□□□ -0.7
VAMP1-206ENST00000538970 MAGEB1P43366 347 aa10.7□□□□□ -0.7
VAMP1-206ENST00000538970 GZMMP51124 257 aa10.7□□□□□ -0.7
VAMP1-206ENST00000538970 TMEM33P57088 247 aa10.7□□□□□ -0.7
VAMP1-206ENST00000538970 ERVS71-1P61550 626 aa10.7□□□□□ -0.7
VAMP1-206ENST00000538970 NKPD1Q17RQ9 610 aa10.7□□□□□ -0.7
VAMP1-206ENST00000538970 VMACQ2NL98 169 aa10.7□□□□□ -0.7
VAMP1-206ENST00000538970 ALKBH6Q3KRA9 238 aa10.7□□□□□ -0.7
VAMP1-206ENST00000538970 SLC36A2Q495M3 483 aa10.7□□□□□ -0.7
VAMP1-206ENST00000538970 INTS11Q5TA45 600 aaKnown RBP10.7□□□□□ -0.7
VAMP1-206ENST00000538970 TMEM53Q6P2H8 277 aa10.7□□□□□ -0.7
VAMP1-206ENST00000538970 DEF8Q6ZN54 512 aa10.7□□□□□ -0.7
VAMP1-206ENST00000538970 HIST3H2AQ7L7L0 130 aa10.7□□□□□ -0.7
VAMP1-206ENST00000538970 SLC16A14Q7RTX9 510 aa10.7□□□□□ -0.7
VAMP1-206ENST00000538970 MEX3DQ86XN8 651 aaKnown RBP10.7□□□□□ -0.7
VAMP1-206ENST00000538970 NOXO1Q8NFA2 376 aa10.7□□□□□ -0.7
VAMP1-206ENST00000538970 OR10A6Q8NH74 314 aa10.7□□□□□ -0.7
VAMP1-206ENST00000538970 SLC26A7Q8TE54 656 aa10.7□□□□□ -0.7
VAMP1-206ENST00000538970 TSPEARQ8WU66 669 aa10.7□□□□□ -0.7
VAMP1-206ENST00000538970 RASSF5Q8WWW0 418 aa10.7□□□□□ -0.7
VAMP1-206ENST00000538970 HIST1H2ACQ93077 130 aa10.7□□□□□ -0.7
VAMP1-206ENST00000538970 MCHR2Q969V1 340 aa10.7□□□□□ -0.7
VAMP1-206ENST00000538970 TMEM186Q96B77 213 aa10.7□□□□□ -0.7
VAMP1-206ENST00000538970 TSPAN32Q96QS1 320 aa10.7□□□□□ -0.7
VAMP1-206ENST00000538970 ZNF347Q96SE7 839 aa10.7□□□□□ -0.7
VAMP1-206ENST00000538970 ZNF416Q9BWM5 594 aa10.7□□□□□ -0.7
VAMP1-206ENST00000538970 MRPL13Q9BYD1 178 aaKnown RBP10.7□□□□□ -0.7
VAMP1-206ENST00000538970 CDH20Q9HBT6 801 aa10.7□□□□□ -0.7
VAMP1-206ENST00000538970 LPAR2Q9HBW0 351 aa10.7□□□□□ -0.7
VAMP1-206ENST00000538970 HINT3Q9NQE9 182 aaKnown RBP10.7□□□□□ -0.7
VAMP1-206ENST00000538970 HIF1ANQ9NWT6 349 aa10.7□□□□□ -0.7
VAMP1-206ENST00000538970 TAAR3PQ9P1P4 343 aa10.7□□□□□ -0.7
VAMP1-206ENST00000538970 C17orf100A8MU93 164 aa10.69□□□□□ -0.7
VAMP1-206ENST00000538970 BLOC1S5-TXNDC5H3BN57 136 aa10.69□□□□□ -0.7
VAMP1-206ENST00000538970 PPIHO43447 177 aaKnown RBP10.69□□□□□ -0.7
VAMP1-206ENST00000538970 MT-ND1P03886 318 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms