RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 F12P00748 615 aaPredicted RBP16.89■□□□□ 0.29
SFSWAP-207ENST00000538548 CPMP14384 443 aa16.89■□□□□ 0.29
SFSWAP-207ENST00000538548 PTGFRP43088 359 aa16.89■□□□□ 0.29
SFSWAP-207ENST00000538548 SRSF3P84103 164 aaKnown RBP16.89■□□□□ 0.29
SFSWAP-207ENST00000538548 ISXQ2M1V0 245 aa16.89■□□□□ 0.29
SFSWAP-207ENST00000538548 LINC00114Q6XXX2 140 aa16.89■□□□□ 0.29
SFSWAP-207ENST00000538548 OR5AP2Q8NGF4 316 aa16.89■□□□□ 0.29
SFSWAP-207ENST00000538548 PAQR8Q8TEZ7 354 aa16.89■□□□□ 0.29
SFSWAP-207ENST00000538548 TCEAL3Q969E4 200 aa16.89■□□□□ 0.29
SFSWAP-207ENST00000538548 SEC22AQ96IW7 307 aa16.89■□□□□ 0.29
SFSWAP-207ENST00000538548 EDEM2Q9BV94 578 aa16.89■□□□□ 0.29
SFSWAP-207ENST00000538548 PTDSS2Q9BVG9 487 aa16.89■□□□□ 0.29
SFSWAP-207ENST00000538548 GSN-AS1Q9NRJ2 163 aa16.89■□□□□ 0.29
SFSWAP-207ENST00000538548 CXXC1Q9P0U4 656 aaPredicted RBP16.89■□□□□ 0.29
SFSWAP-207ENST00000538548 GNB5O14775 395 aa16.89■□□□□ 0.29
SFSWAP-207ENST00000538548 SMAD9O15198 467 aaKnown RBP16.89■□□□□ 0.29
SFSWAP-207ENST00000538548 ABHD16AO95870 558 aa16.89■□□□□ 0.29
SFSWAP-207ENST00000538548 HLA-AP01891 365 aaKnown RBP16.89■□□□□ 0.29
SFSWAP-207ENST00000538548 AMY2AP04746 511 aa16.89■□□□□ 0.29
SFSWAP-207ENST00000538548 S100A9P06702 114 aaKnown RBP16.89■□□□□ 0.29
SFSWAP-207ENST00000538548 C8AP07357 584 aa16.89■□□□□ 0.29
SFSWAP-207ENST00000538548 HLA-GP17693 338 aa16.89■□□□□ 0.29
SFSWAP-207ENST00000538548 DDX6P26196 483 aaKnown RBP eCLIP16.89■□□□□ 0.29
SFSWAP-207ENST00000538548 PRKXP51817 358 aa16.89■□□□□ 0.29
SFSWAP-207ENST00000538548 USP53Q70EK8 1073 aa16.89■□□□□ 0.29
SFSWAP-207ENST00000538548 SLC16A9Q7RTY1 509 aa16.89■□□□□ 0.29
SFSWAP-207ENST00000538548 ING5Q8WYH8 240 aa16.89■□□□□ 0.29
SFSWAP-207ENST00000538548 ZBTB8AQ96BR9 441 aa16.89■□□□□ 0.29
SFSWAP-207ENST00000538548 RASD2Q96D21 266 aa16.89■□□□□ 0.29
SFSWAP-207ENST00000538548 SLC22A11Q9NSA0 550 aa16.89■□□□□ 0.29
SFSWAP-207ENST00000538548 WNT6Q9Y6F9 365 aa16.89■□□□□ 0.29
SFSWAP-207ENST00000538548 MYO9BQ13459 2157 aa16.89■□□□□ 0.29
SFSWAP-207ENST00000538548 A0A0C4DFX4 3053 aa16.89■□□□□ 0.29
SFSWAP-207ENST00000538548 OR4C45A6NMZ5 311 aa16.88■□□□□ 0.29
SFSWAP-207ENST00000538548 CCSO14618 274 aa16.88■□□□□ 0.29
SFSWAP-207ENST00000538548 PCCBP05166 539 aa16.88■□□□□ 0.29
SFSWAP-207ENST00000538548 ZNF888P0CJ79 500 aaPredicted RBP16.88■□□□□ 0.29
SFSWAP-207ENST00000538548 ACAA2P42765 397 aaKnown RBP16.88■□□□□ 0.29
SFSWAP-207ENST00000538548 RAB5BP61020 215 aa16.88■□□□□ 0.29
SFSWAP-207ENST00000538548 TOMM20Q15388 145 aa16.88■□□□□ 0.29
SFSWAP-207ENST00000538548 PLEKHN1Q494U1 663 aaPredicted RBP16.88■□□□□ 0.29
SFSWAP-207ENST00000538548 UNQ6126/PRO20091Q6UXV3 157 aa16.88■□□□□ 0.29
SFSWAP-207ENST00000538548 GALNT16Q8N428 558 aa16.88■□□□□ 0.29
SFSWAP-207ENST00000538548 ZNF511Q8NB15 262 aa16.88■□□□□ 0.29
SFSWAP-207ENST00000538548 GPR148Q8TDV2 347 aa16.88■□□□□ 0.29
SFSWAP-207ENST00000538548 RNF141Q8WVD5 230 aa16.88■□□□□ 0.29
SFSWAP-207ENST00000538548 OR8D1Q8WZ84 308 aa16.88■□□□□ 0.29
SFSWAP-207ENST00000538548 SEH1LQ96EE3 360 aa16.88■□□□□ 0.29
SFSWAP-207ENST00000538548 TINAGL1Q9GZM7 467 aaPredicted RBP16.88■□□□□ 0.29
SFSWAP-207ENST00000538548 COMMD4Q9H0A8 199 aa16.88■□□□□ 0.29
SFSWAP-207ENST00000538548 MKKSQ9NPJ1 570 aaPredicted RBP16.88■□□□□ 0.29
SFSWAP-207ENST00000538548 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.88■□□□□ 0.29
SFSWAP-207ENST00000538548 UQCC1Q9NVA1 299 aa16.88■□□□□ 0.29
SFSWAP-207ENST00000538548 KLHDC2Q9Y2U9 406 aa16.88■□□□□ 0.29
SFSWAP-207ENST00000538548 LOC100289279A0A1B0GTE1 492 aa16.88■□□□□ 0.29
SFSWAP-207ENST00000538548 FAM171A2A8MVW0 826 aa16.88■□□□□ 0.29
SFSWAP-207ENST00000538548 C1QTNF3-AMACRE9PGA6 284 aa16.88■□□□□ 0.29
SFSWAP-207ENST00000538548 ZNF806P0C7X5 589 aa16.88■□□□□ 0.29
SFSWAP-207ENST00000538548 FOLR2P14207 255 aa16.88■□□□□ 0.29
SFSWAP-207ENST00000538548 ARHGAP40Q5TG30 622 aa16.88■□□□□ 0.29
SFSWAP-207ENST00000538548 ANKRD33Q7Z3H0 272 aa16.88■□□□□ 0.29
SFSWAP-207ENST00000538548 ZNF614Q8N883 585 aa16.88■□□□□ 0.29
SFSWAP-207ENST00000538548 OR52E1Q8NGJ3 308 aa16.88■□□□□ 0.29
SFSWAP-207ENST00000538548 DOK4Q8TEW6 326 aa16.88■□□□□ 0.29
SFSWAP-207ENST00000538548 FAM3DQ96BQ1 224 aa16.88■□□□□ 0.29
SFSWAP-207ENST00000538548 PIK3IP1Q96FE7 263 aa16.88■□□□□ 0.29
SFSWAP-207ENST00000538548 TREM1Q9NP99 234 aa16.88■□□□□ 0.29
SFSWAP-207ENST00000538548 M0QYG6 137 aa16.87■□□□□ 0.29
SFSWAP-207ENST00000538548 ITGA5P08648 1049 aa16.87■□□□□ 0.29
SFSWAP-207ENST00000538548 TPT1P13693 172 aaKnown RBP16.87■□□□□ 0.29
SFSWAP-207ENST00000538548 SNRPEP62304 92 aaKnown RBP16.87■□□□□ 0.29
SFSWAP-207ENST00000538548 C2orf76Q3KRA6 126 aa16.87■□□□□ 0.29
SFSWAP-207ENST00000538548 PRAMEF17Q5VTA0 474 aa16.87■□□□□ 0.29
SFSWAP-207ENST00000538548 FAM109BQ6ICB4 259 aaPredicted RBP16.87■□□□□ 0.29
SFSWAP-207ENST00000538548 ZNF425Q6IV72 752 aa16.87■□□□□ 0.29
SFSWAP-207ENST00000538548 ZNF676Q8N7Q3 588 aa16.87■□□□□ 0.29
SFSWAP-207ENST00000538548 OR4A4PQ8NGN8 299 aa16.87■□□□□ 0.29
SFSWAP-207ENST00000538548 TRIM43Q96BQ3 446 aaPredicted RBP16.87■□□□□ 0.29
SFSWAP-207ENST00000538548 ADAD1Q96M93 576 aaKnown RBP16.87■□□□□ 0.29
SFSWAP-207ENST00000538548 MNTQ99583 582 aa16.87■□□□□ 0.29
SFSWAP-207ENST00000538548 RNF122Q9H9V4 155 aa16.87■□□□□ 0.29
SFSWAP-207ENST00000538548 MMP26Q9NRE1 261 aa16.87■□□□□ 0.29
SFSWAP-207ENST00000538548 EML5Q05BV3 1969 aa16.87■□□□□ 0.29
SFSWAP-207ENST00000538548 TMEM212A6NML5 194 aa16.87■□□□□ 0.29
SFSWAP-207ENST00000538548 F8VVB4 439 aa16.87■□□□□ 0.29
SFSWAP-207ENST00000538548 F8VWA3 439 aa16.87■□□□□ 0.29
SFSWAP-207ENST00000538548 YKT6O15498 198 aa16.87■□□□□ 0.29
SFSWAP-207ENST00000538548 CXADRP78310 365 aa16.87■□□□□ 0.29
SFSWAP-207ENST00000538548 ECH1Q13011 328 aa16.87■□□□□ 0.29
SFSWAP-207ENST00000538548 RAB11BQ15907 218 aa16.87■□□□□ 0.29
SFSWAP-207ENST00000538548 FNDC3BQ53EP0 1204 aaKnown RBP16.87■□□□□ 0.29
SFSWAP-207ENST00000538548 ZCCHC12Q6PEW1 402 aa16.87■□□□□ 0.29
SFSWAP-207ENST00000538548 ULK3Q6PHR2 472 aa16.87■□□□□ 0.29
SFSWAP-207ENST00000538548 SLC30A7Q8NEW0 376 aa16.87■□□□□ 0.29
SFSWAP-207ENST00000538548 OR10AC1Q8NH08 325 aa16.87■□□□□ 0.29
SFSWAP-207ENST00000538548 MCHR2Q969V1 340 aa16.87■□□□□ 0.29
SFSWAP-207ENST00000538548 ATG5Q9H1Y0 275 aa16.87■□□□□ 0.29
SFSWAP-207ENST00000538548 POLE3Q9NRF9 147 aa16.87■□□□□ 0.29
SFSWAP-207ENST00000538548 WBP1LQ9NX94 342 aa16.87■□□□□ 0.29
SFSWAP-207ENST00000538548 PLEKHA6Q9Y2H5 1048 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms