RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.98□□□□□ -1.45
USP28-206ENST00000538224 A0A1W2PQM1 296 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 SLC22A23A1A5C7 686 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 TVP23AA6NH52 213 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 OR4C45A6NMZ5 311 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 D6RAR5 112 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 FTCDNL1E5RQL4 147 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 INMT-MINDY4F8WBC2 141 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 GABARAPH6UMI1 98 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 DVL2O14641 736 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 EEF1E1O43324 174 aaKnown RBP5.98□□□□□ -1.45
USP28-206ENST00000538224 PRKNO60260 465 aaPredicted RBP5.98□□□□□ -1.45
USP28-206ENST00000538224 AQP8O94778 261 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 RPP14O95059 124 aaKnown RBP5.98□□□□□ -1.45
USP28-206ENST00000538224 AKR7A3O95154 331 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 IGHEP01854 428 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 HRGP04196 525 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 CD2P06729 351 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 KLK3P07288 261 aaPredicted RBP5.98□□□□□ -1.45
USP28-206ENST00000538224 SYPP08247 313 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 FBXO45P0C2W1 286 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 GSTT2BP0CG30 244 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 FAM157BP0CG42 384 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 TDGF1P13385 188 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 SNRPBP14678 240 aaKnown RBP5.98□□□□□ -1.45
USP28-206ENST00000538224 ZNF823P16415 610 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 ADH6P28332 368 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 EIF1P41567 113 aaKnown RBP5.98□□□□□ -1.45
USP28-206ENST00000538224 FBXW4P57775 412 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 NANOS3P60323 173 aaKnown RBP5.98□□□□□ -1.45
USP28-206ENST00000538224 GPR85P60893 370 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 TLE3Q04726 772 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 CD300CQ08708 224 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 RIPPLY1Q0D2K3 151 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 GPR176Q14439 515 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 TOMM20Q15388 145 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 KCNJ8Q15842 424 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 EXT1Q16394 746 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 BCL2A1Q16548 175 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 NTRK2Q16620 822 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 TEX30Q5JUR7 227 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 PHF19Q5T6S3 580 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 PWWP2BQ6NUJ5 590 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 C3orf33Q6P1S2 294 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 IL20RBQ6UXL0 311 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 H1FNTQ75WM6 255 aaPredicted RBP5.98□□□□□ -1.45
USP28-206ENST00000538224 DPY19L4Q7Z388 723 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 KRT77Q7Z794 578 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 AGBL5Q8NDL9 886 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 OR52N5Q8NH56 324 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 RNF128Q8TEB7 428 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 SMAP2Q8WU79 429 aaPredicted RBP5.98□□□□□ -1.45
USP28-206ENST00000538224 TSEN15Q8WW01 171 aaKnown RBP5.98□□□□□ -1.45
USP28-206ENST00000538224 ZNRF4Q8WWF5 429 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 ASB10Q8WXI3 467 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 PIGKQ92643 395 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 AKAP1Q92667 903 aaKnown RBP eCLIP5.98□□□□□ -1.45
USP28-206ENST00000538224 MIB2Q96AX9 1013 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 S100A16Q96FQ6 103 aaKnown RBP5.98□□□□□ -1.45
USP28-206ENST00000538224 ZNF486Q96H40 463 aaPredicted RBP5.98□□□□□ -1.45
USP28-206ENST00000538224 MAP6Q96JE9 813 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 ST6GAL2Q96JF0 529 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 C5orf34Q96MH7 638 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 ZNF587Q96SQ5 575 aaPredicted RBP5.98□□□□□ -1.45
USP28-206ENST00000538224 SPSB2Q99619 263 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 CMKLR1Q99788 373 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 WDR77Q9BQA1 342 aaPredicted RBP5.98□□□□□ -1.45
USP28-206ENST00000538224 DEFB126Q9BYW3 111 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 RTN4RQ9BZR6 473 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 GAREM1Q9H706 876 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 PTGES2Q9H7Z7 377 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 STMN3Q9NZ72 180 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 KLHL9Q9P2J3 617 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 NLKQ9UBE8 527 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 MYOTQ9UBF9 498 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 CKLFQ9UBR5 152 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 KCNG2Q9UJ96 466 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 CDV3Q9UKY7 258 aaKnown RBP5.98□□□□□ -1.45
USP28-206ENST00000538224 AK6Q9Y3D8 172 aaKnown RBP5.98□□□□□ -1.45
USP28-206ENST00000538224 PCDHGA9Q9Y5G4 932 aaKnown RBP5.98□□□□□ -1.45
USP28-206ENST00000538224 WIF1Q9Y5W5 379 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 ALG5Q9Y673 324 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 U3KQA8 63 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 GON4LQ3T8J9 2241 aa5.97□□□□□ -1.45
USP28-206ENST00000538224 ASXL3Q9C0F0 2248 aa5.97□□□□□ -1.45
USP28-206ENST00000538224 LOC102723996A0A087X1L8 192 aa5.97□□□□□ -1.45
USP28-206ENST00000538224 ACOD1A6NK06 481 aa5.97□□□□□ -1.45
USP28-206ENST00000538224 FAM171A2A8MVW0 826 aa5.97□□□□□ -1.45
USP28-206ENST00000538224 H7C1C5 153 aa5.97□□□□□ -1.45
USP28-206ENST00000538224 ACOT7O00154 380 aa5.97□□□□□ -1.45
USP28-206ENST00000538224 MEN1O00255 615 aa5.97□□□□□ -1.45
USP28-206ENST00000538224 ZNF593O00488 134 aaPredicted RBP5.97□□□□□ -1.45
USP28-206ENST00000538224 SOX1O00570 391 aaPredicted RBP5.97□□□□□ -1.45
USP28-206ENST00000538224 ADAM10O14672 748 aa5.97□□□□□ -1.45
USP28-206ENST00000538224 RGS13O14921 159 aa5.97□□□□□ -1.45
USP28-206ENST00000538224 GMFGO60234 142 aa5.97□□□□□ -1.45
USP28-206ENST00000538224 SLC16A7O60669 478 aa5.97□□□□□ -1.45
USP28-206ENST00000538224 PRAF2O60831 178 aa5.97□□□□□ -1.45
USP28-206ENST00000538224 KHDRBS3O75525 346 aaKnown RBP5.97□□□□□ -1.45
USP28-206ENST00000538224 KRT33AO76009 404 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms