RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 PAX7P23759 505 aa12.36□□□□□ -0.43
UBE3B-206ENST00000536398 IFNA8P32881 189 aa12.36□□□□□ -0.43
UBE3B-206ENST00000536398 THBS4P35443 961 aa12.36□□□□□ -0.43
UBE3B-206ENST00000536398 GPR4P46093 362 aa12.36□□□□□ -0.43
UBE3B-206ENST00000536398 GIPRP48546 466 aa12.36□□□□□ -0.43
UBE3B-206ENST00000536398 PTDSS1P48651 473 aaKnown RBP12.36□□□□□ -0.43
UBE3B-206ENST00000536398 RIPPLY3P57055 190 aa12.36□□□□□ -0.43
UBE3B-206ENST00000536398 CLRN1P58418 232 aa12.36□□□□□ -0.43
UBE3B-206ENST00000536398 RAB1AP62820 205 aa12.36□□□□□ -0.43
UBE3B-206ENST00000536398 TOP3AQ13472 1001 aaPredicted RBP12.36□□□□□ -0.43
UBE3B-206ENST00000536398 RAB39AQ14964 217 aa12.36□□□□□ -0.43
UBE3B-206ENST00000536398 SWI5Q1ZZU3 235 aa12.36□□□□□ -0.43
UBE3B-206ENST00000536398 PODNL1Q6PEZ8 512 aa12.36□□□□□ -0.43
UBE3B-206ENST00000536398 ZNF730Q6ZMV8 503 aa12.36□□□□□ -0.43
UBE3B-206ENST00000536398 DNM1P46Q6ZS02 220 aa12.36□□□□□ -0.43
UBE3B-206ENST00000536398 MBOAT2Q6ZWT7 520 aa12.36□□□□□ -0.43
UBE3B-206ENST00000536398 CCDC36Q8IYA8 594 aa12.36□□□□□ -0.43
UBE3B-206ENST00000536398 PGAM4Q8N0Y7 254 aa12.36□□□□□ -0.43
UBE3B-206ENST00000536398 SLC22A24Q8N4F4 322 aa12.36□□□□□ -0.43
UBE3B-206ENST00000536398 FITM2Q8N6M3 262 aa12.36□□□□□ -0.43
UBE3B-206ENST00000536398 LRRC75AQ8NAA5 344 aa12.36□□□□□ -0.43
UBE3B-206ENST00000536398 NOXO1Q8NFA2 376 aa12.36□□□□□ -0.43
UBE3B-206ENST00000536398 OR13C2Q8NGS9 318 aa12.36□□□□□ -0.43
UBE3B-206ENST00000536398 ACOT11Q8WXI4 607 aaPredicted RBP12.36□□□□□ -0.43
UBE3B-206ENST00000536398 SEPHS2Q99611 448 aa12.36□□□□□ -0.43
UBE3B-206ENST00000536398 TMEM38BQ9NVV0 291 aa12.36□□□□□ -0.43
UBE3B-206ENST00000536398 RPS6KA6Q9UK32 745 aa12.36□□□□□ -0.43
UBE3B-206ENST00000536398 ZNF346Q9UL40 294 aaKnown RBP12.36□□□□□ -0.43
UBE3B-206ENST00000536398 HIF3AQ9Y2N7 669 aa12.36□□□□□ -0.43
UBE3B-206ENST00000536398 EFCAB9A8MZ26 197 aa12.35□□□□□ -0.43
UBE3B-206ENST00000536398 SLC2A10O95528 541 aa12.35□□□□□ -0.43
UBE3B-206ENST00000536398 OR4A8P0C604 315 aa12.35□□□□□ -0.43
UBE3B-206ENST00000536398 SAGP10523 405 aaPredicted RBP12.35□□□□□ -0.43
UBE3B-206ENST00000536398 HSD17B1P14061 328 aa12.35□□□□□ -0.43
UBE3B-206ENST00000536398 ZNF14P17017 642 aaPredicted RBP12.35□□□□□ -0.43
UBE3B-206ENST00000536398 SERPINF1P36955 418 aa12.35□□□□□ -0.43
UBE3B-206ENST00000536398 DAP3P51398 398 aaKnown RBP12.35□□□□□ -0.43
UBE3B-206ENST00000536398 CTXN1P60606 82 aa12.35□□□□□ -0.43
UBE3B-206ENST00000536398 VLDLRP98155 873 aa12.35□□□□□ -0.43
UBE3B-206ENST00000536398 FMODQ06828 376 aa12.35□□□□□ -0.43
UBE3B-206ENST00000536398 RAB35Q15286 201 aa12.35□□□□□ -0.43
UBE3B-206ENST00000536398 FXNQ16595 210 aa12.35□□□□□ -0.43
UBE3B-206ENST00000536398 IQCCQ4KMZ1 466 aa12.35□□□□□ -0.43
UBE3B-206ENST00000536398 ALG10Q5BKT4 473 aa12.35□□□□□ -0.43
UBE3B-206ENST00000536398 KRT80Q6KB66 452 aa12.35□□□□□ -0.43
UBE3B-206ENST00000536398 PIWIL3Q7Z3Z3 882 aaKnown RBP12.35□□□□□ -0.43
UBE3B-206ENST00000536398 DEFB107AQ8IZN7 70 aa12.35□□□□□ -0.43
UBE3B-206ENST00000536398 ANKS4BQ8N8V4 417 aa12.35□□□□□ -0.43
UBE3B-206ENST00000536398 OR4K5Q8NGD3 323 aa12.35□□□□□ -0.43
UBE3B-206ENST00000536398 SLC7A13Q8TCU3 470 aa12.35□□□□□ -0.43
UBE3B-206ENST00000536398 NMD3Q96D46 503 aaKnown RBP12.35□□□□□ -0.43
UBE3B-206ENST00000536398 TXNIPQ9H3M7 391 aa12.35□□□□□ -0.43
UBE3B-206ENST00000536398 GORASP2Q9H8Y8 452 aa12.35□□□□□ -0.43
UBE3B-206ENST00000536398 NF1P21359 2839 aa12.35□□□□□ -0.43
UBE3B-206ENST00000536398 C2CD3Q4AC94 2353 aa12.34□□□□□ -0.43
UBE3B-206ENST00000536398 TRBV4-1A0A0J9YWV2 114 aa12.34□□□□□ -0.43
UBE3B-206ENST00000536398 H7C417 338 aa12.34□□□□□ -0.43
UBE3B-206ENST00000536398 H1F0P07305 194 aaKnown RBP12.34□□□□□ -0.43
UBE3B-206ENST00000536398 OR8G3PP0DMU2 310 aa12.34□□□□□ -0.43
UBE3B-206ENST00000536398 ZNF35P13682 527 aa12.34□□□□□ -0.43
UBE3B-206ENST00000536398 HOXB4P17483 251 aaPredicted RBP12.34□□□□□ -0.43
UBE3B-206ENST00000536398 CDAP32320 146 aa12.34□□□□□ -0.43
UBE3B-206ENST00000536398 SEC23BQ15437 767 aa12.34□□□□□ -0.43
UBE3B-206ENST00000536398 MSMPQ1L6U9 139 aa12.34□□□□□ -0.43
UBE3B-206ENST00000536398 OAFQ86UD1 273 aa12.34□□□□□ -0.43
UBE3B-206ENST00000536398 CYP4Z1Q86W10 505 aa12.34□□□□□ -0.43
UBE3B-206ENST00000536398 ZNF584Q8IVC4 421 aa12.34□□□□□ -0.43
UBE3B-206ENST00000536398 RNF113BQ8IZP6 322 aaKnown RBP12.34□□□□□ -0.43
UBE3B-206ENST00000536398 NUP37Q8NFH4 326 aa12.34□□□□□ -0.43
UBE3B-206ENST00000536398 OR4F15Q8NGB8 312 aa12.34□□□□□ -0.43
UBE3B-206ENST00000536398 OR52J3Q8NH60 311 aa12.34□□□□□ -0.43
UBE3B-206ENST00000536398 NSMAFQ92636 917 aa12.34□□□□□ -0.43
UBE3B-206ENST00000536398 TSPAN32Q96QS1 320 aa12.34□□□□□ -0.43
UBE3B-206ENST00000536398 KCNK17Q96T54 332 aa12.34□□□□□ -0.43
UBE3B-206ENST00000536398 REG4Q9BYZ8 158 aa12.34□□□□□ -0.43
UBE3B-206ENST00000536398 MOV10Q9HCE1 1003 aaKnown RBP12.34□□□□□ -0.43
UBE3B-206ENST00000536398 SAMD4AQ9UPU9 718 aaKnown RBP12.34□□□□□ -0.43
UBE3B-206ENST00000536398 UGT2A1Q9Y4X1 527 aa12.34□□□□□ -0.43
UBE3B-206ENST00000536398 ANK3Q12955 4377 aaKnown RBP12.34□□□□□ -0.43
UBE3B-206ENST00000536398 ZANQ9Y493 2812 aa12.33□□□□□ -0.44
UBE3B-206ENST00000536398 IGHV4-30-2A0A087WSY4 118 aa12.33□□□□□ -0.44
UBE3B-206ENST00000536398 TMEM129A0AVI4 362 aa12.33□□□□□ -0.44
UBE3B-206ENST00000536398 B2RBV5 119 aa12.33□□□□□ -0.44
UBE3B-206ENST00000536398 ARPC2O15144 300 aa12.33□□□□□ -0.44
UBE3B-206ENST00000536398 GPRIN2O60269 458 aa12.33□□□□□ -0.44
UBE3B-206ENST00000536398 GMNNO75496 209 aa12.33□□□□□ -0.44
UBE3B-206ENST00000536398 UBL3O95164 117 aa12.33□□□□□ -0.44
UBE3B-206ENST00000536398 RAB36O95755 333 aa12.33□□□□□ -0.44
UBE3B-206ENST00000536398 SEMG1P04279 462 aa12.33□□□□□ -0.44
UBE3B-206ENST00000536398 HEXAP06865 529 aa12.33□□□□□ -0.44
UBE3B-206ENST00000536398 RHCEP18577 417 aa12.33□□□□□ -0.44
UBE3B-206ENST00000536398 NR4A1P22736 598 aa12.33□□□□□ -0.44
UBE3B-206ENST00000536398 ZNF133P52736 654 aaPredicted RBP12.33□□□□□ -0.44
UBE3B-206ENST00000536398 NUDT6P53370 316 aa12.33□□□□□ -0.44
UBE3B-206ENST00000536398 RPL27P61353 136 aaKnown RBP12.33□□□□□ -0.44
UBE3B-206ENST00000536398 ERVK-25P63136 954 aa12.33□□□□□ -0.44
UBE3B-206ENST00000536398 MXRA7P84157 204 aa12.33□□□□□ -0.44
UBE3B-206ENST00000536398 CHRNB3Q05901 458 aa12.33□□□□□ -0.44
UBE3B-206ENST00000536398 SNTB2Q13425 540 aaKnown RBP12.33□□□□□ -0.44
UBE3B-206ENST00000536398 KRT72Q14CN4 511 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms