RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 MCIDASD6RGH6 385 aa11.31□□□□□ -0.6
RTN3-207ENST00000536011 MGRN1O60291 552 aa11.31□□□□□ -0.6
RTN3-207ENST00000536011 BCL10O95999 233 aa11.31□□□□□ -0.6
RTN3-207ENST00000536011 NPPAP01160 153 aa11.31□□□□□ -0.6
RTN3-207ENST00000536011 SERPINA5P05154 406 aa11.31□□□□□ -0.6
RTN3-207ENST00000536011 TROVE2P10155 538 aaKnown RBP eCLIP11.31□□□□□ -0.6
RTN3-207ENST00000536011 NR2C1P13056 603 aa11.31□□□□□ -0.6
RTN3-207ENST00000536011 RBM34P42696 430 aaKnown RBP11.31□□□□□ -0.6
RTN3-207ENST00000536011 DAP3P51398 398 aaKnown RBP11.31□□□□□ -0.6
RTN3-207ENST00000536011 ZNF84P51523 738 aa11.31□□□□□ -0.6
RTN3-207ENST00000536011 CLRN1P58418 232 aa11.31□□□□□ -0.6
RTN3-207ENST00000536011 MAPRE2Q15555 327 aa11.31□□□□□ -0.6
RTN3-207ENST00000536011 SLC36A2Q495M3 483 aa11.31□□□□□ -0.6
RTN3-207ENST00000536011 MMEL1Q495T6 779 aa11.31□□□□□ -0.6
RTN3-207ENST00000536011 COQ5Q5HYK3 327 aa11.31□□□□□ -0.6
RTN3-207ENST00000536011 ERICH5Q6P6B1 374 aa11.31□□□□□ -0.6
RTN3-207ENST00000536011 WDR88Q6ZMY6 472 aa11.31□□□□□ -0.6
RTN3-207ENST00000536011 PHC2Q8IXK0 858 aa11.31□□□□□ -0.6
RTN3-207ENST00000536011 LINC01356Q8N9X3 169 aa11.31□□□□□ -0.6
RTN3-207ENST00000536011 OR8J3Q8NGG0 315 aa11.31□□□□□ -0.6
RTN3-207ENST00000536011 ECSITQ9BQ95 431 aa11.31□□□□□ -0.6
RTN3-207ENST00000536011 MRPL37Q9BZE1 423 aaKnown RBP11.31□□□□□ -0.6
RTN3-207ENST00000536011 TMEM38BQ9NVV0 291 aa11.31□□□□□ -0.6
RTN3-207ENST00000536011 TAS2R5Q9NYW4 299 aa11.31□□□□□ -0.6
RTN3-207ENST00000536011 MALRD1Q5VYJ5 2156 aa11.3□□□□□ -0.6
RTN3-207ENST00000536011 A0A1W2PPW3 197 aa11.3□□□□□ -0.6
RTN3-207ENST00000536011 DHHO43323 396 aa11.3□□□□□ -0.6
RTN3-207ENST00000536011 LYPD3O95274 346 aa11.3□□□□□ -0.6
RTN3-207ENST00000536011 IGF2P01344 180 aa11.3□□□□□ -0.6
RTN3-207ENST00000536011 ASAH2BP0C7U1 165 aa11.3□□□□□ -0.6
RTN3-207ENST00000536011 PGA4P0DJD7 388 aa11.3□□□□□ -0.6
RTN3-207ENST00000536011 PGA3P0DJD8 388 aa11.3□□□□□ -0.6
RTN3-207ENST00000536011 IFNA8P32881 189 aa11.3□□□□□ -0.6
RTN3-207ENST00000536011 TAS2R41P59536 307 aa11.3□□□□□ -0.6
RTN3-207ENST00000536011 PLP2Q04941 152 aa11.3□□□□□ -0.6
RTN3-207ENST00000536011 RIN1Q13671 783 aa11.3□□□□□ -0.6
RTN3-207ENST00000536011 RAB39AQ14964 217 aa11.3□□□□□ -0.6
RTN3-207ENST00000536011 RBM45Q8IUH3 476 aaKnown RBP11.3□□□□□ -0.6
RTN3-207ENST00000536011 ZCCHC24Q8N2G6 241 aaKnown RBP11.3□□□□□ -0.6
RTN3-207ENST00000536011 ARIH2OSQ8N7S6 290 aa11.3□□□□□ -0.6
RTN3-207ENST00000536011 SLC30A7Q8NEW0 376 aa11.3□□□□□ -0.6
RTN3-207ENST00000536011 OR1J2Q8NGS2 313 aa11.3□□□□□ -0.6
RTN3-207ENST00000536011 ZNF75AQ96N20 296 aa11.3□□□□□ -0.6
RTN3-207ENST00000536011 SNX18Q96RF0 628 aa11.3□□□□□ -0.6
RTN3-207ENST00000536011 SYT3Q9BQG1 590 aa11.3□□□□□ -0.6
RTN3-207ENST00000536011 LRMDAQ9H2I8 198 aa11.3□□□□□ -0.6
RTN3-207ENST00000536011 TPK1Q9H3S4 243 aa11.3□□□□□ -0.6
RTN3-207ENST00000536011 CDH20Q9HBT6 801 aa11.3□□□□□ -0.6
RTN3-207ENST00000536011 ZNF224Q9NZL3 707 aa11.3□□□□□ -0.6
RTN3-207ENST00000536011 SH3GLB1Q9Y371 365 aa11.3□□□□□ -0.6
RTN3-207ENST00000536011 IQCMA0A1B0GVH7 501 aa11.29□□□□□ -0.6
RTN3-207ENST00000536011 LRP5LA4QPB2 252 aa11.29□□□□□ -0.6
RTN3-207ENST00000536011 GMNCA6NCL1 334 aa11.29□□□□□ -0.6
RTN3-207ENST00000536011 BLOC1S5-TXNDC5H3BN57 136 aa11.29□□□□□ -0.6
RTN3-207ENST00000536011 OR5F1O95221 314 aa11.29□□□□□ -0.6
RTN3-207ENST00000536011 MT-ND1P03886 318 aa11.29□□□□□ -0.6
RTN3-207ENST00000536011 MT-ND5P03915 603 aa11.29□□□□□ -0.6
RTN3-207ENST00000536011 THY1P04216 161 aa11.29□□□□□ -0.6
RTN3-207ENST00000536011 QDPRP09417 244 aa11.29□□□□□ -0.6
RTN3-207ENST00000536011 THRBP10828 461 aa11.29□□□□□ -0.6
RTN3-207ENST00000536011 ACHEP22303 614 aa11.29□□□□□ -0.6
RTN3-207ENST00000536011 MRPS11P82912 194 aaKnown RBP11.29□□□□□ -0.6
RTN3-207ENST00000536011 MELKQ14680 651 aa11.29□□□□□ -0.6
RTN3-207ENST00000536011 FXNQ16595 210 aa11.29□□□□□ -0.6
RTN3-207ENST00000536011 NKPD1Q17RQ9 610 aa11.29□□□□□ -0.6
RTN3-207ENST00000536011 TBC1D28Q2M2D7 210 aa11.29□□□□□ -0.6
RTN3-207ENST00000536011 CR1LQ2VPA4 569 aa11.29□□□□□ -0.6
RTN3-207ENST00000536011 RGS7BPQ6MZT1 257 aaPredicted RBP11.29□□□□□ -0.6
RTN3-207ENST00000536011 NANOGP8Q6NSW7 305 aa11.29□□□□□ -0.6
RTN3-207ENST00000536011 SLC16A14Q7RTX9 510 aa11.29□□□□□ -0.6
RTN3-207ENST00000536011 CARM1Q86X55 608 aa11.29□□□□□ -0.6
RTN3-207ENST00000536011 SKA3Q8IX90 412 aa11.29□□□□□ -0.6
RTN3-207ENST00000536011 LRRC17Q8N6Y2 441 aa11.29□□□□□ -0.6
RTN3-207ENST00000536011 PCYOX1LQ8NBM8 494 aa11.29□□□□□ -0.6
RTN3-207ENST00000536011 NOXO1Q8NFA2 376 aa11.29□□□□□ -0.6
RTN3-207ENST00000536011 OR4D11Q8NGI4 311 aa11.29□□□□□ -0.6
RTN3-207ENST00000536011 SNX33Q8WV41 574 aa11.29□□□□□ -0.6
RTN3-207ENST00000536011 RDH5Q92781 318 aa11.29□□□□□ -0.6
RTN3-207ENST00000536011 LRRC58Q96CX6 371 aa11.29□□□□□ -0.6
RTN3-207ENST00000536011 ZNF416Q9BWM5 594 aa11.29□□□□□ -0.6
RTN3-207ENST00000536011 TMEM120AQ9BXJ8 343 aa11.29□□□□□ -0.6
RTN3-207ENST00000536011 KCNN2Q9H2S1 579 aa11.29□□□□□ -0.6
RTN3-207ENST00000536011 RNF121Q9H920 327 aa11.29□□□□□ -0.6
RTN3-207ENST00000536011 NANOGQ9H9S0 305 aa11.29□□□□□ -0.6
RTN3-207ENST00000536011 GID8Q9NWU2 228 aa11.29□□□□□ -0.6
RTN3-207ENST00000536011 DUSP13Q9UII6 198 aa11.29□□□□□ -0.6
RTN3-207ENST00000536011 ANK2Q01484 3957 aa11.29□□□□□ -0.6
RTN3-207ENST00000536011 HTR3EA5X5Y0 456 aa11.28□□□□□ -0.6
RTN3-207ENST00000536011 NPIPB13A6NJU9 1138 aa11.28□□□□□ -0.6
RTN3-207ENST00000536011 NPIPB4C9JG80 1138 aa11.28□□□□□ -0.6
RTN3-207ENST00000536011 MRASO14807 208 aa11.28□□□□□ -0.6
RTN3-207ENST00000536011 LILRA1O75019 489 aa11.28□□□□□ -0.6
RTN3-207ENST00000536011 OR7A10O76100 309 aa11.28□□□□□ -0.6
RTN3-207ENST00000536011 SNAP29O95721 258 aa11.28□□□□□ -0.6
RTN3-207ENST00000536011 RAD52P43351 418 aa11.28□□□□□ -0.6
RTN3-207ENST00000536011 GPR6P46095 362 aaPredicted RBP11.28□□□□□ -0.6
RTN3-207ENST00000536011 CDH15P55291 814 aa11.28□□□□□ -0.6
RTN3-207ENST00000536011 KLF3P57682 345 aaPredicted RBP11.28□□□□□ -0.6
RTN3-207ENST00000536011 SCGB2A2Q13296 93 aa11.28□□□□□ -0.6
RTN3-207ENST00000536011 MOGQ16653 247 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms