RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 GTPBP8Q8N3Z3 284 aaPredicted RBP2.82□□□□□ -1.96
PRKDC-205ENST00000535375 OR10G2Q8NGC3 310 aa2.82□□□□□ -1.96
PRKDC-205ENST00000535375 DEDD2Q8WXF8 326 aa2.82□□□□□ -1.96
PRKDC-205ENST00000535375 CMTM7Q96FZ5 175 aa2.82□□□□□ -1.96
PRKDC-205ENST00000535375 IFT74Q96LB3 600 aa2.82□□□□□ -1.96
PRKDC-205ENST00000535375 TAAR1Q96RJ0 339 aa2.82□□□□□ -1.96
PRKDC-205ENST00000535375 GIN1Q9NXP7 522 aa2.82□□□□□ -1.96
PRKDC-205ENST00000535375 NSG1A0A0A6YYJ2 146 aa2.81□□□□□ -1.96
PRKDC-205ENST00000535375 ANGPTL7O43827 346 aa2.81□□□□□ -1.96
PRKDC-205ENST00000535375 IGKV1-17P01599 117 aa2.81□□□□□ -1.96
PRKDC-205ENST00000535375 RETP07949 1114 aa2.81□□□□□ -1.96
PRKDC-205ENST00000535375 CMA1P23946 247 aa2.81□□□□□ -1.96
PRKDC-205ENST00000535375 KCNJ2P63252 427 aa2.81□□□□□ -1.96
PRKDC-205ENST00000535375 MOBPQ13875 183 aa2.81□□□□□ -1.96
PRKDC-205ENST00000535375 UBE2SQ16763 222 aa2.81□□□□□ -1.96
PRKDC-205ENST00000535375 TMEM183BQ1AE95 376 aa2.81□□□□□ -1.96
PRKDC-205ENST00000535375 C5orf47Q569G3 176 aa2.81□□□□□ -1.96
PRKDC-205ENST00000535375 PRAMEF20Q5VT98 475 aa2.81□□□□□ -1.96
PRKDC-205ENST00000535375 C1orf94Q6P1W5 598 aa2.81□□□□□ -1.96
PRKDC-205ENST00000535375 Q6ZSR3 168 aa2.81□□□□□ -1.96
PRKDC-205ENST00000535375 TMEM183AQ8IXX5 376 aa2.81□□□□□ -1.96
PRKDC-205ENST00000535375 SPATA4Q8NEY3 305 aa2.81□□□□□ -1.96
PRKDC-205ENST00000535375 PYROXD1Q8WU10 500 aa2.81□□□□□ -1.96
PRKDC-205ENST00000535375 ELMO1Q92556 727 aa2.81□□□□□ -1.96
PRKDC-205ENST00000535375 ASB9Q96DX5 294 aa2.81□□□□□ -1.96
PRKDC-205ENST00000535375 SPIN2AQ99865 258 aa2.81□□□□□ -1.96
PRKDC-205ENST00000535375 SPIN2BQ9BPZ2 258 aa2.81□□□□□ -1.96
PRKDC-205ENST00000535375 MFFQ9GZY8 342 aa2.81□□□□□ -1.96
PRKDC-205ENST00000535375 ILKAPQ9H0C8 392 aaPredicted RBP2.81□□□□□ -1.96
PRKDC-205ENST00000535375 RACGAP1Q9H0H5 632 aa2.81□□□□□ -1.96
PRKDC-205ENST00000535375 IL26Q9NPH9 171 aa2.81□□□□□ -1.96
PRKDC-205ENST00000535375 RAB20Q9NX57 234 aa2.81□□□□□ -1.96
PRKDC-205ENST00000535375 QPCTLQ9NXS2 382 aa2.81□□□□□ -1.96
PRKDC-205ENST00000535375 KCNIP1Q9NZI2 227 aa2.81□□□□□ -1.96
PRKDC-205ENST00000535375 PCYOX1Q9UHG3 505 aa2.81□□□□□ -1.96
PRKDC-205ENST00000535375 ZNF835Q9Y2P0 537 aa2.81□□□□□ -1.96
PRKDC-205ENST00000535375 STARD10Q9Y365 291 aa2.81□□□□□ -1.96
PRKDC-205ENST00000535375 MROH7-TTC4A0A0A0MT08 1334 aa2.81□□□□□ -1.96
PRKDC-205ENST00000535375 CDHR2Q9BYE9 1310 aa2.81□□□□□ -1.96
PRKDC-205ENST00000535375 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.8□□□□□ -1.96
PRKDC-205ENST00000535375 FANCIQ9NVI1 1328 aa2.8□□□□□ -1.96
PRKDC-205ENST00000535375 IGLV3-22A0A075B6J6 115 aa2.8□□□□□ -1.96
PRKDC-205ENST00000535375 OR2AG2A6NM03 316 aa2.8□□□□□ -1.96
PRKDC-205ENST00000535375 CACNG3O60359 315 aa2.8□□□□□ -1.96
PRKDC-205ENST00000535375 SUPT3HO75486 399 aa2.8□□□□□ -1.96
PRKDC-205ENST00000535375 CTAG2O75638 210 aa2.8□□□□□ -1.96
PRKDC-205ENST00000535375 IGHV2-5P01817 119 aa2.8□□□□□ -1.96
PRKDC-205ENST00000535375 KRT14P02533 472 aa2.8□□□□□ -1.96
PRKDC-205ENST00000535375 UBTFL1P0CB47 393 aaPredicted RBP2.8□□□□□ -1.96
PRKDC-205ENST00000535375 ZNF286BP0CG31 522 aa2.8□□□□□ -1.96
PRKDC-205ENST00000535375 CXCL5P42830 114 aa2.8□□□□□ -1.96
PRKDC-205ENST00000535375 GSSP48637 474 aa2.8□□□□□ -1.96
PRKDC-205ENST00000535375 PRRX1P54821 245 aa2.8□□□□□ -1.96
PRKDC-205ENST00000535375 FBXW4P57775 412 aa2.8□□□□□ -1.96
PRKDC-205ENST00000535375 TGM3Q08188 693 aa2.8□□□□□ -1.96
PRKDC-205ENST00000535375 SMARCB1Q12824 385 aa2.8□□□□□ -1.96
PRKDC-205ENST00000535375 CARD17Q5XLA6 110 aa2.8□□□□□ -1.96
PRKDC-205ENST00000535375 LRRC74BQ6ZQY2 392 aa2.8□□□□□ -1.96
PRKDC-205ENST00000535375 OR7G2Q8NG99 324 aa2.8□□□□□ -1.96
PRKDC-205ENST00000535375 OR4C5Q8NGB2 326 aa2.8□□□□□ -1.96
PRKDC-205ENST00000535375 OR4F15Q8NGB8 312 aa2.8□□□□□ -1.96
PRKDC-205ENST00000535375 UBALD1Q8TB05 177 aa2.8□□□□□ -1.96
PRKDC-205ENST00000535375 ACOT11Q8WXI4 607 aaPredicted RBP2.8□□□□□ -1.96
PRKDC-205ENST00000535375 MS4A4EQ96PG1 132 aa2.8□□□□□ -1.96
PRKDC-205ENST00000535375 ACTR6Q9GZN1 396 aa2.8□□□□□ -1.96
PRKDC-205ENST00000535375 INPP5EQ9NRR6 644 aa2.8□□□□□ -1.96
PRKDC-205ENST00000535375 GLRX2Q9NS18 164 aa2.8□□□□□ -1.96
PRKDC-205ENST00000535375 PSMC3IPQ9P2W1 217 aaPredicted RBP2.8□□□□□ -1.96
PRKDC-205ENST00000535375 N6AMT1Q9Y5N5 214 aa2.8□□□□□ -1.96
PRKDC-205ENST00000535375 KIR2DL5BA0A0G2JN68 375 aa2.79□□□□□ -1.96
PRKDC-205ENST00000535375 KIR2DL5BA0A0G2JPC4 375 aa2.79□□□□□ -1.96
PRKDC-205ENST00000535375 BET1O15155 118 aa2.79□□□□□ -1.96
PRKDC-205ENST00000535375 RNF13O43567 381 aa2.79□□□□□ -1.96
PRKDC-205ENST00000535375 KLHL41O60662 606 aa2.79□□□□□ -1.96
PRKDC-205ENST00000535375 TOM1O60784 492 aa2.79□□□□□ -1.96
PRKDC-205ENST00000535375 WBP4O75554 376 aaKnown RBP2.79□□□□□ -1.96
PRKDC-205ENST00000535375 CTDNEP1O95476 244 aa2.79□□□□□ -1.96
PRKDC-205ENST00000535375 SERPIND1P05546 499 aa2.79□□□□□ -1.96
PRKDC-205ENST00000535375 TROVE2P10155 538 aaKnown RBP eCLIP2.79□□□□□ -1.96
PRKDC-205ENST00000535375 GALP22466 123 aa2.79□□□□□ -1.96
PRKDC-205ENST00000535375 RDXP35241 583 aaKnown RBP2.79□□□□□ -1.96
PRKDC-205ENST00000535375 NPBWR2P48146 333 aa2.79□□□□□ -1.96
PRKDC-205ENST00000535375 UBE2AP49459 152 aa2.79□□□□□ -1.96
PRKDC-205ENST00000535375 IRX3P78415 501 aaPredicted RBP2.79□□□□□ -1.96
PRKDC-205ENST00000535375 KIAA0087Q14695 138 aa2.79□□□□□ -1.96
PRKDC-205ENST00000535375 CYTH1Q15438 398 aa2.79□□□□□ -1.96
PRKDC-205ENST00000535375 VAX1Q5SQQ9 334 aa2.79□□□□□ -1.96
PRKDC-205ENST00000535375 RAET1LQ5VY80 246 aa2.79□□□□□ -1.96
PRKDC-205ENST00000535375 SASS6Q6UVJ0 657 aa2.79□□□□□ -1.96
PRKDC-205ENST00000535375 ZNF546Q86UE3 836 aa2.79□□□□□ -1.96
PRKDC-205ENST00000535375 KIR2DL5AQ8N109 375 aa2.79□□□□□ -1.96
PRKDC-205ENST00000535375 CEP112Q8N8E3 955 aa2.79□□□□□ -1.96
PRKDC-205ENST00000535375 Q8N976 141 aa2.79□□□□□ -1.96
PRKDC-205ENST00000535375 PLPPR1Q8TBJ4 325 aa2.79□□□□□ -1.96
PRKDC-205ENST00000535375 OR8B4Q96RC9 309 aa2.79□□□□□ -1.96
PRKDC-205ENST00000535375 TGS1Q96RS0 853 aaKnown RBP2.79□□□□□ -1.96
PRKDC-205ENST00000535375 SH3GL1Q99961 368 aa2.79□□□□□ -1.96
PRKDC-205ENST00000535375 TMEM246Q9BRR3 403 aa2.79□□□□□ -1.96
PRKDC-205ENST00000535375 RIOK2Q9BVS4 552 aaKnown RBP2.79□□□□□ -1.96
PRKDC-205ENST00000535375 DEFB127Q9H1M4 99 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms