RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 FAM162AQ96A26 154 aa14.92□□□□□ -0.02
PHRF1-204ENST00000532550 BPIFA2Q96DR5 249 aa14.92□□□□□ -0.02
PHRF1-204ENST00000532550 MS4A3Q96HJ5 214 aa14.92□□□□□ -0.02
PHRF1-204ENST00000532550 PLK3Q9H4B4 646 aa14.92□□□□□ -0.02
PHRF1-204ENST00000532550 NOX3Q9HBY0 568 aa14.92□□□□□ -0.02
PHRF1-204ENST00000532550 STX18Q9P2W9 335 aaKnown RBP14.92□□□□□ -0.02
PHRF1-204ENST00000532550 SNX13Q9Y5W8 968 aa14.92□□□□□ -0.02
PHRF1-204ENST00000532550 INAFM1C9JVW0 142 aa14.91□□□□□ -0.02
PHRF1-204ENST00000532550 J3KTA2 159 aa14.91□□□□□ -0.02
PHRF1-204ENST00000532550 SNX3O60493 162 aa14.91□□□□□ -0.02
PHRF1-204ENST00000532550 ACADSP16219 412 aa14.91□□□□□ -0.02
PHRF1-204ENST00000532550 ZNF14P17017 642 aaPredicted RBP14.91□□□□□ -0.02
PHRF1-204ENST00000532550 NR4A1P22736 598 aa14.91□□□□□ -0.02
PHRF1-204ENST00000532550 PRDX6P30041 224 aa14.91□□□□□ -0.02
PHRF1-204ENST00000532550 LSP1P33241 339 aa14.91□□□□□ -0.02
PHRF1-204ENST00000532550 MYBPC1Q00872 1141 aa14.91□□□□□ -0.02
PHRF1-204ENST00000532550 SNTB2Q13425 540 aaKnown RBP14.91□□□□□ -0.02
PHRF1-204ENST00000532550 TRAM2Q15035 370 aa14.91□□□□□ -0.02
PHRF1-204ENST00000532550 HIST3H3Q16695 136 aa14.91□□□□□ -0.02
PHRF1-204ENST00000532550 KRT80Q6KB66 452 aa14.91□□□□□ -0.02
PHRF1-204ENST00000532550 CDK20Q8IZL9 346 aa14.91□□□□□ -0.02
PHRF1-204ENST00000532550 OFCC1Q8IZS5 231 aa14.91□□□□□ -0.02
PHRF1-204ENST00000532550 ASB10Q8WXI3 467 aa14.91□□□□□ -0.02
PHRF1-204ENST00000532550 ZNF75AQ96N20 296 aa14.91□□□□□ -0.02
PHRF1-204ENST00000532550 ZNF347Q96SE7 839 aa14.91□□□□□ -0.02
PHRF1-204ENST00000532550 MRPL13Q9BYD1 178 aaKnown RBP14.91□□□□□ -0.02
PHRF1-204ENST00000532550 RAB1BQ9H0U4 201 aa14.91□□□□□ -0.02
PHRF1-204ENST00000532550 RNF121Q9H920 327 aa14.91□□□□□ -0.02
PHRF1-204ENST00000532550 TMEM38BQ9NVV0 291 aa14.91□□□□□ -0.02
PHRF1-204ENST00000532550 ZNF224Q9NZL3 707 aa14.91□□□□□ -0.02
PHRF1-204ENST00000532550 CMAHPQ9Y471 501 aa14.91□□□□□ -0.02
PHRF1-204ENST00000532550 JMJD1CQ15652 2540 aa14.91□□□□□ -0.02
PHRF1-204ENST00000532550 hCG_2039718K7EN88 272 aa14.9□□□□□ -0.02
PHRF1-204ENST00000532550 PIP5K1CO60331 668 aa14.9□□□□□ -0.02
PHRF1-204ENST00000532550 GMNNO75496 209 aa14.9□□□□□ -0.02
PHRF1-204ENST00000532550 TRMUO75648 421 aaKnown RBP14.9□□□□□ -0.02
PHRF1-204ENST00000532550 LY6HO94772 140 aa14.9□□□□□ -0.02
PHRF1-204ENST00000532550 TSPAN19P0C672 248 aa14.9□□□□□ -0.02
PHRF1-204ENST00000532550 PATE4P0C8F1 98 aa14.9□□□□□ -0.02
PHRF1-204ENST00000532550 SAGP10523 405 aaPredicted RBP14.9□□□□□ -0.02
PHRF1-204ENST00000532550 ZNF35P13682 527 aa14.9□□□□□ -0.02
PHRF1-204ENST00000532550 NCK1P16333 377 aa14.9□□□□□ -0.02
PHRF1-204ENST00000532550 DRD4P21917 467 aa14.9□□□□□ -0.02
PHRF1-204ENST00000532550 PDLIM4P50479 330 aa14.9□□□□□ -0.02
PHRF1-204ENST00000532550 GALK2Q01415 458 aa14.9□□□□□ -0.02
PHRF1-204ENST00000532550 RUNX1T1Q06455 604 aa14.9□□□□□ -0.02
PHRF1-204ENST00000532550 RAB39AQ14964 217 aa14.9□□□□□ -0.02
PHRF1-204ENST00000532550 ALG10Q5BKT4 473 aa14.9□□□□□ -0.02
PHRF1-204ENST00000532550 GKAP1Q5VSY0 366 aaPredicted RBP14.9□□□□□ -0.02
PHRF1-204ENST00000532550 TMEM53Q6P2H8 277 aa14.9□□□□□ -0.02
PHRF1-204ENST00000532550 RRM2BQ7LG56 351 aa14.9□□□□□ -0.02
PHRF1-204ENST00000532550 DPPA2Q7Z7J5 298 aa14.9□□□□□ -0.02
PHRF1-204ENST00000532550 CYP4Z1Q86W10 505 aa14.9□□□□□ -0.02
PHRF1-204ENST00000532550 NRMQ8IXM6 262 aa14.9□□□□□ -0.02
PHRF1-204ENST00000532550 RNF113BQ8IZP6 322 aaKnown RBP14.9□□□□□ -0.02
PHRF1-204ENST00000532550 NOXO1Q8NFA2 376 aa14.9□□□□□ -0.02
PHRF1-204ENST00000532550 OR4K5Q8NGD3 323 aa14.9□□□□□ -0.02
PHRF1-204ENST00000532550 C10orf105Q8TEF2 133 aa14.9□□□□□ -0.02
PHRF1-204ENST00000532550 HSH2DQ96JZ2 352 aa14.9□□□□□ -0.02
PHRF1-204ENST00000532550 SORCS2Q96PQ0 1159 aa14.9□□□□□ -0.02
PHRF1-204ENST00000532550 DOK1Q99704 481 aa14.9□□□□□ -0.02
PHRF1-204ENST00000532550 SH3GL3Q99963 347 aa14.9□□□□□ -0.02
PHRF1-204ENST00000532550 TXNIPQ9H3M7 391 aa14.9□□□□□ -0.02
PHRF1-204ENST00000532550 SPAG4Q9NPE6 437 aa14.9□□□□□ -0.02
PHRF1-204ENST00000532550 ADA2Q9NZK5 511 aa14.9□□□□□ -0.02
PHRF1-204ENST00000532550 ABCD2Q9UBJ2 740 aa14.9□□□□□ -0.02
PHRF1-204ENST00000532550 RPS6KA6Q9UK32 745 aa14.9□□□□□ -0.02
PHRF1-204ENST00000532550 HIF3AQ9Y2N7 669 aa14.9□□□□□ -0.02
PHRF1-204ENST00000532550 SH3PXD2BA1X283 911 aa14.89□□□□□ -0.03
PHRF1-204ENST00000532550 FFAR1O14842 300 aa14.89□□□□□ -0.03
PHRF1-204ENST00000532550 MGRN1O60291 552 aa14.89□□□□□ -0.03
PHRF1-204ENST00000532550 SERPINA5P05154 406 aa14.89□□□□□ -0.03
PHRF1-204ENST00000532550 ERCC1P07992 297 aaPredicted RBP14.89□□□□□ -0.03
PHRF1-204ENST00000532550 PPOXP50336 477 aa14.89□□□□□ -0.03
PHRF1-204ENST00000532550 LSM11P83369 360 aaKnown RBP eCLIP14.89□□□□□ -0.03
PHRF1-204ENST00000532550 PRKCDQ05655 676 aa14.89□□□□□ -0.03
PHRF1-204ENST00000532550 KRTAP1-1Q07627 177 aa14.89□□□□□ -0.03
PHRF1-204ENST00000532550 TAF11Q15544 211 aa14.89□□□□□ -0.03
PHRF1-204ENST00000532550 SLC36A2Q495M3 483 aa14.89□□□□□ -0.03
PHRF1-204ENST00000532550 ARMC4Q5T2S8 1044 aa14.89□□□□□ -0.03
PHRF1-204ENST00000532550 GLYATQ6IB77 296 aa14.89□□□□□ -0.03
PHRF1-204ENST00000532550 ZNF730Q6ZMV8 503 aa14.89□□□□□ -0.03
PHRF1-204ENST00000532550 SLC16A14Q7RTX9 510 aa14.89□□□□□ -0.03
PHRF1-204ENST00000532550 SVOPLQ8N434 492 aa14.89□□□□□ -0.03
PHRF1-204ENST00000532550 ANKS4BQ8N8V4 417 aa14.89□□□□□ -0.03
PHRF1-204ENST00000532550 OR51A7Q8NH64 312 aa14.89□□□□□ -0.03
PHRF1-204ENST00000532550 FGFBP3Q8TAT2 258 aa14.89□□□□□ -0.03
PHRF1-204ENST00000532550 TNFRSF13CQ96RJ3 184 aa14.89□□□□□ -0.03
PHRF1-204ENST00000532550 KCNN2Q9H2S1 579 aa14.89□□□□□ -0.03
PHRF1-204ENST00000532550 EGFL7Q9UHF1 273 aa14.89□□□□□ -0.03
PHRF1-204ENST00000532550 FAM32AQ9Y421 112 aaKnown RBP14.89□□□□□ -0.03
PHRF1-204ENST00000532550 SONP18583 2426 aaKnown RBP14.89□□□□□ -0.03
PHRF1-204ENST00000532550 RTTNQ86VV8 2226 aa14.89□□□□□ -0.03
PHRF1-204ENST00000532550 TMEM129A0AVI4 362 aa14.88□□□□□ -0.03
PHRF1-204ENST00000532550 NPIPB13A6NJU9 1138 aa14.88□□□□□ -0.03
PHRF1-204ENST00000532550 EFCAB9A8MZ26 197 aa14.88□□□□□ -0.03
PHRF1-204ENST00000532550 NPIPB4C9JG80 1138 aa14.88□□□□□ -0.03
PHRF1-204ENST00000532550 TLX2O43763 284 aaPredicted RBP14.88□□□□□ -0.03
PHRF1-204ENST00000532550 CD5LO43866 347 aa14.88□□□□□ -0.03
PHRF1-204ENST00000532550 GPRIN2O60269 458 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms