RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 SGCDQ92629 289 aa9.44□□□□□ -0.9
SOX6-213ENST00000530378 ZMYND19Q96E35 227 aaPredicted RBP9.44□□□□□ -0.9
SOX6-213ENST00000530378 ZNF582Q96NG8 517 aaPredicted RBP9.44□□□□□ -0.9
SOX6-213ENST00000530378 KCNK17Q96T54 332 aa9.44□□□□□ -0.9
SOX6-213ENST00000530378 NUAK2Q9H093 628 aa9.44□□□□□ -0.9
SOX6-213ENST00000530378 TP63Q9H3D4 680 aaPredicted RBP9.44□□□□□ -0.9
SOX6-213ENST00000530378 FANCFQ9NPI8 374 aa9.44□□□□□ -0.9
SOX6-213ENST00000530378 IGKV3D-15A0A087WSY6 115 aa9.43□□□□□ -0.9
SOX6-213ENST00000530378 LOC102725191A0A1B0GVB3 256 aa9.43□□□□□ -0.9
SOX6-213ENST00000530378 A6NIZ1 184 aa9.43□□□□□ -0.9
SOX6-213ENST00000530378 IDH3BO43837 385 aa9.43□□□□□ -0.9
SOX6-213ENST00000530378 SLC16A7O60669 478 aa9.43□□□□□ -0.9
SOX6-213ENST00000530378 FAM20BO75063 409 aa9.43□□□□□ -0.9
SOX6-213ENST00000530378 MRPL33O75394 65 aaKnown RBP9.43□□□□□ -0.9
SOX6-213ENST00000530378 UPK3AO75631 287 aa9.43□□□□□ -0.9
SOX6-213ENST00000530378 YES1P07947 543 aa9.43□□□□□ -0.9
SOX6-213ENST00000530378 SPI1P17947 270 aa9.43□□□□□ -0.9
SOX6-213ENST00000530378 PAICSP22234 425 aaKnown RBP9.43□□□□□ -0.9
SOX6-213ENST00000530378 UQCRFS1P47985 274 aa9.43□□□□□ -0.9
SOX6-213ENST00000530378 RAP1BP61224 184 aa9.43□□□□□ -0.9
SOX6-213ENST00000530378 RAP1AP62834 184 aa9.43□□□□□ -0.9
SOX6-213ENST00000530378 TLE1Q04724 770 aa9.43□□□□□ -0.9
SOX6-213ENST00000530378 PIGFQ07326 219 aa9.43□□□□□ -0.9
SOX6-213ENST00000530378 TMEM201Q5SNT2 666 aa9.43□□□□□ -0.9
SOX6-213ENST00000530378 ADCK1Q86TW2 530 aa9.43□□□□□ -0.9
SOX6-213ENST00000530378 ST6GALNAC3Q8NDV1 305 aa9.43□□□□□ -0.9
SOX6-213ENST00000530378 OR6X1Q8NH79 312 aa9.43□□□□□ -0.9
SOX6-213ENST00000530378 PTP4A1Q93096 173 aa9.43□□□□□ -0.9
SOX6-213ENST00000530378 WNT2BQ93097 391 aa9.43□□□□□ -0.9
SOX6-213ENST00000530378 SLC25A44Q96H78 314 aaPredicted RBP9.43□□□□□ -0.9
SOX6-213ENST00000530378 CLN6Q9NWW5 311 aa9.43□□□□□ -0.9
SOX6-213ENST00000530378 PRSS50Q9UI38 385 aa9.43□□□□□ -0.9
SOX6-213ENST00000530378 ZNF835Q9Y2P0 537 aa9.43□□□□□ -0.9
SOX6-213ENST00000530378 MYO18BQ8IUG5 2567 aa9.43□□□□□ -0.9
SOX6-213ENST00000530378 A0A1W2PPL8 197 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 SH3D21A4FU49 640 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 TVP23AA6NH52 213 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 PYCARD-AS1I3L0S3 204 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 GPR171O14626 319 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 AKAP8O43823 692 aaKnown RBP9.42□□□□□ -0.9
SOX6-213ENST00000530378 ZNF432O94892 652 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 GLI4P10075 376 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 GABRA1P14867 456 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 CDH11P55287 796 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 SNRPGP62308 76 aaKnown RBP9.42□□□□□ -0.9
SOX6-213ENST00000530378 EFNB1P98172 346 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 PMPCAQ10713 525 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 LINGO2Q7L985 606 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 ZNF100Q8IYN0 542 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 OR6V1Q8N148 313 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 UBE2J2Q8N2K1 259 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 ZNF837Q96EG3 531 aaPredicted RBP9.42□□□□□ -0.9
SOX6-213ENST00000530378 GMPPAQ96IJ6 420 aaPredicted RBP9.42□□□□□ -0.9
SOX6-213ENST00000530378 DDOQ99489 341 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 TTTY10Q9BZA0 68 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 BCO1Q9HAY6 547 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 MBD3L4A6NDZ8 208 aaPredicted RBP9.42□□□□□ -0.9
SOX6-213ENST00000530378 MBD3L3A6NE82 208 aaPredicted RBP9.42□□□□□ -0.9
SOX6-213ENST00000530378 CCDC182A6NF36 153 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 MBD3L5A6NJ08 208 aaPredicted RBP9.42□□□□□ -0.9
SOX6-213ENST00000530378 NPIPB13A6NJU9 1138 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 CD8B2A6NJW9 211 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 NPIPB4C9JG80 1138 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 SLC1A7O00341 560 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 MPZL2O60487 215 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 SS18L1O75177 396 aaPredicted RBP9.42□□□□□ -0.9
SOX6-213ENST00000530378 SLC43A1O75387 559 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 KRT33AO76009 404 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 HLA-DQA2P01906 255 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 RPSAP08865 295 aaKnown RBP9.42□□□□□ -0.9
SOX6-213ENST00000530378 QDPRP09417 244 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 TMIGD3P0DMS9 266 aaPredicted RBP9.42□□□□□ -0.9
SOX6-213ENST00000530378 CDAP32320 146 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 NAA10P41227 235 aaPredicted RBP9.42□□□□□ -0.9
SOX6-213ENST00000530378 RPS27P42677 84 aaKnown RBP9.42□□□□□ -0.9
SOX6-213ENST00000530378 FOXG1P55316 489 aaPredicted RBP9.42□□□□□ -0.9
SOX6-213ENST00000530378 ZNF91Q05481 1191 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 MEP1BQ16820 701 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 C6orf141Q5SZD1 244 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 TSPO2Q5TGU0 170 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 AADACL4Q5VUY2 407 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 FAM205BPQ63HN1 556 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 GTF2IRD2BQ6EKJ0 949 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 UGT2A3Q6UWM9 527 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 HDDC2Q7Z4H3 204 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 GTF2IRD2Q86UP8 949 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 FAM26EQ8N5C1 309 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 ZNF511Q8NB15 262 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 MBD3L2Q8NHZ7 208 aaPredicted RBP9.42□□□□□ -0.9
SOX6-213ENST00000530378 APH1AQ96BI3 265 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 ADAD1Q96M93 576 aaKnown RBP9.42□□□□□ -0.9
SOX6-213ENST00000530378 TM9SF2Q99805 663 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 TTYH2Q9BSA4 534 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 MRPL13Q9BYD1 178 aaKnown RBP9.42□□□□□ -0.9
SOX6-213ENST00000530378 ULBP2Q9BZM5 246 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 SLCO5A1Q9H2Y9 848 aa9.42□□□□□ -0.9
SOX6-213ENST00000530378 VSX1Q9NZR4 365 aaPredicted RBP9.42□□□□□ -0.9
SOX6-213ENST00000530378 H2AFY2Q9P0M6 372 aaPredicted RBP9.42□□□□□ -0.9
SOX6-213ENST00000530378 COA3Q9Y2R0 106 aaPredicted RBP9.42□□□□□ -0.9
SOX6-213ENST00000530378 HSPE1-MOB4S4R3N1 261 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms