RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	HAVCR2	Q8TDQ0	301 aa		13.18	□□□□□ -0.3
NR1H3-231	ENST00000529540	ZCCHC14	Q8WYQ9	949 aa	Known RBP	13.18	□□□□□ -0.3
NR1H3-231	ENST00000529540	YIPF5	Q969M3	257 aa		13.18	□□□□□ -0.3
NR1H3-231	ENST00000529540	ABHD1	Q96SE0	405 aa		13.18	□□□□□ -0.3
NR1H3-231	ENST00000529540	UTP23	Q9BRU9	249 aa	Known RBP	13.18	□□□□□ -0.3
NR1H3-231	ENST00000529540	MFRP	Q9BY79	579 aa		13.18	□□□□□ -0.3
NR1H3-231	ENST00000529540	NARFL	Q9H6Q4	476 aa		13.18	□□□□□ -0.3
NR1H3-231	ENST00000529540	NUDT15	Q9NV35	164 aa		13.18	□□□□□ -0.3
NR1H3-231	ENST00000529540	FBXO34	Q9NWN3	711 aa		13.18	□□□□□ -0.3
NR1H3-231	ENST00000529540	RABL2A	Q9UBK7	228 aa	Predicted RBP	13.18	□□□□□ -0.3
NR1H3-231	ENST00000529540	ZNF222	Q9UK12	451 aa		13.18	□□□□□ -0.3
NR1H3-231	ENST00000529540	RABL2B	Q9UNT1	228 aa		13.18	□□□□□ -0.3
NR1H3-231	ENST00000529540	NPTN	Q9Y639	398 aa		13.18	□□□□□ -0.3
NR1H3-231	ENST00000529540	RPS10-NUDT3	A0A1W2PQS6	291 aa		13.17	□□□□□ -0.3
NR1H3-231	ENST00000529540	MED19	A0JLT2	244 aa	Predicted RBP	13.17	□□□□□ -0.3
NR1H3-231	ENST00000529540	SERINC4	A6NH21	518 aa		13.17	□□□□□ -0.3
NR1H3-231	ENST00000529540	UNC119B	A6NIH7	251 aa		13.17	□□□□□ -0.3
NR1H3-231	ENST00000529540	FZD7	O75084	574 aa		13.17	□□□□□ -0.3
NR1H3-231	ENST00000529540	CEACAM4	O75871	244 aa		13.17	□□□□□ -0.3
NR1H3-231	ENST00000529540	UBL3	O95164	117 aa		13.17	□□□□□ -0.3
NR1H3-231	ENST00000529540	IFNA7	P01567	189 aa		13.17	□□□□□ -0.3
NR1H3-231	ENST00000529540	FBXW4	P57775	412 aa		13.17	□□□□□ -0.3
NR1H3-231	ENST00000529540	PITPNA	Q00169	270 aa		13.17	□□□□□ -0.3
NR1H3-231	ENST00000529540	KLHL26	Q53HC5	615 aa		13.17	□□□□□ -0.3
NR1H3-231	ENST00000529540	FCRLB	Q6BAA4	426 aa		13.17	□□□□□ -0.3
NR1H3-231	ENST00000529540	IL20RB	Q6UXL0	311 aa		13.17	□□□□□ -0.3
NR1H3-231	ENST00000529540	C16orf47	Q6ZP98	133 aa	Predicted RBP	13.17	□□□□□ -0.3
NR1H3-231	ENST00000529540	BTN2A1	Q7KYR7	527 aa		13.17	□□□□□ -0.3
NR1H3-231	ENST00000529540	ZAR1	Q86SH2	424 aa		13.17	□□□□□ -0.3
NR1H3-231	ENST00000529540	BEST3	Q8N1M1	668 aa		13.17	□□□□□ -0.3
NR1H3-231	ENST00000529540	OR11H4	Q8NGC9	324 aa		13.17	□□□□□ -0.3
NR1H3-231	ENST00000529540	OR4C3	Q8NH37	302 aa		13.17	□□□□□ -0.3
NR1H3-231	ENST00000529540	KISS1R	Q969F8	398 aa	Predicted RBP	13.17	□□□□□ -0.3
NR1H3-231	ENST00000529540	C12orf10	Q9HB07	376 aa		13.17	□□□□□ -0.3
NR1H3-231	ENST00000529540	RAX	Q9Y2V3	346 aa		13.17	□□□□□ -0.3
NR1H3-231	ENST00000529540	SPEF1	Q9Y4P9	236 aa		13.17	□□□□□ -0.3
NR1H3-231	ENST00000529540	PCSK5	Q92824	1860 aa		13.17	□□□□□ -0.3
NR1H3-231	ENST00000529540	TRAV6	A0A075B6T7	132 aa		13.16	□□□□□ -0.3
NR1H3-231	ENST00000529540	DAPL1	A0PJW8	107 aa		13.16	□□□□□ -0.3
NR1H3-231	ENST00000529540	CDHR4	A6H8M9	788 aa		13.16	□□□□□ -0.3
NR1H3-231	ENST00000529540	C1QTNF9B	B2RNN3	333 aa		13.16	□□□□□ -0.3
NR1H3-231	ENST00000529540	CTDSPL	O15194	276 aa		13.16	□□□□□ -0.3
NR1H3-231	ENST00000529540	C1QTNF9	P0C862	333 aa		13.16	□□□□□ -0.3
NR1H3-231	ENST00000529540	CCL11	P51671	97 aa		13.16	□□□□□ -0.3
NR1H3-231	ENST00000529540	EEF1A1	P68104	462 aa	Known RBP	13.16	□□□□□ -0.3
NR1H3-231	ENST00000529540	DYRK1A	Q13627	763 aa		13.16	□□□□□ -0.3
NR1H3-231	ENST00000529540	KLHL12	Q53G59	568 aa		13.16	□□□□□ -0.3
NR1H3-231	ENST00000529540	SLC22A10	Q63ZE4	541 aa		13.16	□□□□□ -0.3
NR1H3-231	ENST00000529540	B3GNTL1	Q67FW5	361 aa	Predicted RBP	13.16	□□□□□ -0.3
NR1H3-231	ENST00000529540	LYPD4	Q6UWN0	246 aa		13.16	□□□□□ -0.3
NR1H3-231	ENST00000529540	ZNF550	Q7Z398	422 aa		13.16	□□□□□ -0.3
NR1H3-231	ENST00000529540	TIGD4	Q8IY51	512 aa		13.16	□□□□□ -0.3
NR1H3-231	ENST00000529540	TOMM5	Q8N4H5	51 aa		13.16	□□□□□ -0.3
NR1H3-231	ENST00000529540	ABHD4	Q8TB40	342 aa		13.16	□□□□□ -0.3
NR1H3-231	ENST00000529540	PAQR8	Q8TEZ7	354 aa		13.16	□□□□□ -0.3
NR1H3-231	ENST00000529540	TMEM255B	Q8WV15	326 aa		13.16	□□□□□ -0.3
NR1H3-231	ENST00000529540	ACTR6	Q9GZN1	396 aa		13.16	□□□□□ -0.3
NR1H3-231	ENST00000529540	ZCCHC4	Q9H5U6	513 aa		13.16	□□□□□ -0.3
NR1H3-231	ENST00000529540	METTL7A	Q9H8H3	244 aa		13.16	□□□□□ -0.3
NR1H3-231	ENST00000529540	EXOSC3	Q9NQT5	275 aa	Known RBP	13.16	□□□□□ -0.3
NR1H3-231	ENST00000529540	KLRF1	Q9NZS2	232 aa		13.16	□□□□□ -0.3
NR1H3-231	ENST00000529540	ABRACL	Q9P1F3	81 aa		13.16	□□□□□ -0.3
NR1H3-231	ENST00000529540	SCP2D1	Q9UJQ7	156 aa		13.16	□□□□□ -0.3
NR1H3-231	ENST00000529540	PCDHGA9	Q9Y5G4	932 aa	Known RBP	13.16	□□□□□ -0.3
NR1H3-231	ENST00000529540	CACNA1A	O00555	2505 aa		13.16	□□□□□ -0.3
NR1H3-231	ENST00000529540	TRAV1-2	A0A0B4J238	106 aa		13.15	□□□□□ -0.3
NR1H3-231	ENST00000529540	SLC22A31	A6NKX4	558 aa		13.15	□□□□□ -0.3
NR1H3-231	ENST00000529540	MASP2	O00187	686 aa		13.15	□□□□□ -0.3
NR1H3-231	ENST00000529540	BHLHE40	O14503	412 aa		13.15	□□□□□ -0.3
NR1H3-231	ENST00000529540	CDC42EP2	O14613	210 aa		13.15	□□□□□ -0.3
NR1H3-231	ENST00000529540	FADS1	O60427	444 aa		13.15	□□□□□ -0.3
NR1H3-231	ENST00000529540	ZNF354A	O60765	605 aa	Predicted RBP	13.15	□□□□□ -0.3
NR1H3-231	ENST00000529540	CSTA	P01040	98 aa		13.15	□□□□□ -0.3
NR1H3-231	ENST00000529540	ITGB2	P05107	769 aa		13.15	□□□□□ -0.3
NR1H3-231	ENST00000529540	H2AFB2	P0C5Z0	115 aa		13.15	□□□□□ -0.3
NR1H3-231	ENST00000529540	UBL4A	P11441	157 aa		13.15	□□□□□ -0.3
NR1H3-231	ENST00000529540	OC90	Q02509	493 aa	Predicted RBP	13.15	□□□□□ -0.3
NR1H3-231	ENST00000529540	C17orf67	Q0P5P2	114 aa		13.15	□□□□□ -0.3
NR1H3-231	ENST00000529540	GSG1	Q2KHT4	349 aa		13.15	□□□□□ -0.3
NR1H3-231	ENST00000529540	CDON	Q4KMG0	1287 aa		13.15	□□□□□ -0.3
NR1H3-231	ENST00000529540	MRPL2	Q5T653	305 aa	Known RBP	13.15	□□□□□ -0.3
NR1H3-231	ENST00000529540	RPL13AP3	Q6NVV1	102 aa		13.15	□□□□□ -0.3
NR1H3-231	ENST00000529540	PLBD1	Q6P4A8	553 aa		13.15	□□□□□ -0.3
NR1H3-231	ENST00000529540	ZNF836	Q6ZNA1	936 aa		13.15	□□□□□ -0.3
NR1H3-231	ENST00000529540	SIAH3	Q8IW03	269 aa		13.15	□□□□□ -0.3
NR1H3-231	ENST00000529540	RNF113B	Q8IZP6	322 aa	Known RBP	13.15	□□□□□ -0.3
NR1H3-231	ENST00000529540	LNX2	Q8N448	690 aa		13.15	□□□□□ -0.3
NR1H3-231	ENST00000529540	OR10G3	Q8NGC4	313 aa		13.15	□□□□□ -0.3
NR1H3-231	ENST00000529540	OR52L1	Q8NGH7	329 aa		13.15	□□□□□ -0.3
NR1H3-231	ENST00000529540	FANK1	Q8TC84	345 aa		13.15	□□□□□ -0.3
NR1H3-231	ENST00000529540	RNF138	Q8WVD3	245 aa		13.15	□□□□□ -0.3
NR1H3-231	ENST00000529540	ZG16B	Q96DA0	208 aa		13.15	□□□□□ -0.3
NR1H3-231	ENST00000529540	CMTM3	Q96MX0	182 aa		13.15	□□□□□ -0.3
NR1H3-231	ENST00000529540	OR52D1	Q9H346	318 aa		13.15	□□□□□ -0.3
NR1H3-231	ENST00000529540	ZNF552	Q9H707	407 aa	Predicted RBP	13.15	□□□□□ -0.3
NR1H3-231	ENST00000529540	LRFN1	Q9P244	771 aa		13.15	□□□□□ -0.3
NR1H3-231	ENST00000529540	NTNG1	Q9Y2I2	539 aa		13.15	□□□□□ -0.3
NR1H3-231	ENST00000529540	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	13.15	□□□□□ -0.3
NR1H3-231	ENST00000529540	NPIPA5	A0A0B4J1W7	369 aa		13.15	□□□□□ -0.31
NR1H3-231	ENST00000529540	OR5H15	A6NDH6	313 aa		13.15	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms