RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 BGLAPP02818 100 aa10.61□□□□□ -0.71
USF1-208ENST00000528768 AZGP1P25311 298 aaKnown RBP10.61□□□□□ -0.71
USF1-208ENST00000528768 MAPK3P27361 379 aaPredicted RBP10.61□□□□□ -0.71
USF1-208ENST00000528768 ACVR1BP36896 505 aa10.61□□□□□ -0.71
USF1-208ENST00000528768 RPS5P46782 204 aaKnown RBP10.61□□□□□ -0.71
USF1-208ENST00000528768 EIF2B2P49770 351 aaKnown RBP10.61□□□□□ -0.71
USF1-208ENST00000528768 PITPNAQ00169 270 aa10.61□□□□□ -0.71
USF1-208ENST00000528768 RPL18Q07020 188 aaKnown RBP10.61□□□□□ -0.71
USF1-208ENST00000528768 IL11RAQ14626 422 aa10.61□□□□□ -0.71
USF1-208ENST00000528768 QPRTQ15274 297 aa10.61□□□□□ -0.71
USF1-208ENST00000528768 ZNF79Q15937 498 aa10.61□□□□□ -0.71
USF1-208ENST00000528768 SGCBQ16585 318 aa10.61□□□□□ -0.71
USF1-208ENST00000528768 VASNQ6EMK4 673 aa10.61□□□□□ -0.71
USF1-208ENST00000528768 COX15Q7KZN9 410 aa10.61□□□□□ -0.71
USF1-208ENST00000528768 PXKQ7Z7A4 578 aa10.61□□□□□ -0.71
USF1-208ENST00000528768 OR5J2Q8NH18 312 aa10.61□□□□□ -0.71
USF1-208ENST00000528768 ENKURQ8TC29 256 aa10.61□□□□□ -0.71
USF1-208ENST00000528768 SLC22A8Q8TCC7 542 aa10.61□□□□□ -0.71
USF1-208ENST00000528768 HPS1Q92902 700 aa10.61□□□□□ -0.71
USF1-208ENST00000528768 RASD2Q96D21 266 aa10.61□□□□□ -0.71
USF1-208ENST00000528768 KTI12Q96EK9 354 aaPredicted RBP10.61□□□□□ -0.71
USF1-208ENST00000528768 CMTM3Q96MX0 182 aa10.61□□□□□ -0.71
USF1-208ENST00000528768 TIMP4Q99727 224 aa10.61□□□□□ -0.71
USF1-208ENST00000528768 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.61□□□□□ -0.71
USF1-208ENST00000528768 RPRD1BQ9NQG5 326 aaKnown RBP10.61□□□□□ -0.71
USF1-208ENST00000528768 RYDENQ9NUL5 291 aaKnown RBP10.61□□□□□ -0.71
USF1-208ENST00000528768 ST6GALNAC2Q9UJ37 374 aa10.61□□□□□ -0.71
USF1-208ENST00000528768 FBXL4Q9UKA2 621 aa10.61□□□□□ -0.71
USF1-208ENST00000528768 PPIEQ9UNP9 301 aaKnown RBP10.61□□□□□ -0.71
USF1-208ENST00000528768 A0A1W2PQ09 198 aa10.6□□□□□ -0.71
USF1-208ENST00000528768 A0A1W2PRG6 482 aa10.6□□□□□ -0.71
USF1-208ENST00000528768 A6NIZ1 184 aa10.6□□□□□ -0.71
USF1-208ENST00000528768 NOTOA8MTQ0 251 aa10.6□□□□□ -0.71
USF1-208ENST00000528768 CENPBD1B2RD01 187 aa10.6□□□□□ -0.71
USF1-208ENST00000528768 E9PI62 339 aa10.6□□□□□ -0.71
USF1-208ENST00000528768 BOLA2-SMG1P6H3BVE0 249 aa10.6□□□□□ -0.71
USF1-208ENST00000528768 PRKNO60260 465 aaPredicted RBP10.6□□□□□ -0.71
USF1-208ENST00000528768 ITGA10O75578 1167 aa10.6□□□□□ -0.71
USF1-208ENST00000528768 TFP02787 698 aa10.6□□□□□ -0.71
USF1-208ENST00000528768 PRKCAP17252 672 aa10.6□□□□□ -0.71
USF1-208ENST00000528768 SHC1P29353 583 aa10.6□□□□□ -0.71
USF1-208ENST00000528768 APOBEC1P41238 236 aaKnown RBP10.6□□□□□ -0.71
USF1-208ENST00000528768 CDKN2AP42771 156 aaKnown RBP10.6□□□□□ -0.71
USF1-208ENST00000528768 OR2B6P58173 313 aa10.6□□□□□ -0.71
USF1-208ENST00000528768 RAP1BP61224 184 aa10.6□□□□□ -0.71
USF1-208ENST00000528768 RAP1AP62834 184 aa10.6□□□□□ -0.71
USF1-208ENST00000528768 MC2RQ01718 297 aa10.6□□□□□ -0.71
USF1-208ENST00000528768 HSD17B12Q53GQ0 312 aa10.6□□□□□ -0.71
USF1-208ENST00000528768 YIF1BQ5BJH7 314 aa10.6□□□□□ -0.71
USF1-208ENST00000528768 ZMAT1Q5H9K5 638 aa10.6□□□□□ -0.71
USF1-208ENST00000528768 C1orf140Q5VVS0 124 aa10.6□□□□□ -0.71
USF1-208ENST00000528768 C1QL3Q5VWW1 255 aa10.6□□□□□ -0.71
USF1-208ENST00000528768 FAM205BPQ63HN1 556 aa10.6□□□□□ -0.71
USF1-208ENST00000528768 SFXN4Q6P4A7 337 aa10.6□□□□□ -0.71
USF1-208ENST00000528768 PAPD4Q6PIY7 484 aaKnown RBP10.6□□□□□ -0.71
USF1-208ENST00000528768 DNM1P34Q6PK57 102 aa10.6□□□□□ -0.71
USF1-208ENST00000528768 ZNF517Q6ZMY9 492 aaPredicted RBP10.6□□□□□ -0.71
USF1-208ENST00000528768 LANCL3Q6ZV70 420 aa10.6□□□□□ -0.71
USF1-208ENST00000528768 FAM122BQ7Z309 247 aa10.6□□□□□ -0.71
USF1-208ENST00000528768 CPEB2Q7Z5Q1 589 aaKnown RBP10.6□□□□□ -0.71
USF1-208ENST00000528768 Q8N402 240 aa10.6□□□□□ -0.71
USF1-208ENST00000528768 OR51L1Q8NGJ5 315 aa10.6□□□□□ -0.71
USF1-208ENST00000528768 GPR119Q8TDV5 335 aa10.6□□□□□ -0.71
USF1-208ENST00000528768 ASB17Q8WXJ9 295 aa10.6□□□□□ -0.71
USF1-208ENST00000528768 TAAR8Q969N4 342 aa10.6□□□□□ -0.71
USF1-208ENST00000528768 PMEPA1Q969W9 287 aa10.6□□□□□ -0.71
USF1-208ENST00000528768 PELI1Q96FA3 418 aa10.6□□□□□ -0.71
USF1-208ENST00000528768 PGLYRP3Q96LB9 341 aa10.6□□□□□ -0.71
USF1-208ENST00000528768 MOGAT1Q96PD6 335 aa10.6□□□□□ -0.71
USF1-208ENST00000528768 CRB3Q9BUF7 120 aa10.6□□□□□ -0.71
USF1-208ENST00000528768 RNF32Q9H0A6 362 aa10.6□□□□□ -0.71
USF1-208ENST00000528768 SLC26A1Q9H2B4 701 aa10.6□□□□□ -0.71
USF1-208ENST00000528768 WDR76Q9H967 626 aa10.6□□□□□ -0.71
USF1-208ENST00000528768 EXTL2Q9UBQ6 330 aa10.6□□□□□ -0.71
USF1-208ENST00000528768 LAMP5Q9UJQ1 280 aa10.6□□□□□ -0.71
USF1-208ENST00000528768 ZNF281Q9Y2X9 895 aa10.6□□□□□ -0.71
USF1-208ENST00000528768 FKBP7Q9Y680 259 aa10.6□□□□□ -0.71
USF1-208ENST00000528768 SIRT4Q9Y6E7 314 aaPredicted RBP10.6□□□□□ -0.71
USF1-208ENST00000528768 HIVEP3Q5T1R4 2406 aa10.59□□□□□ -0.71
USF1-208ENST00000528768 SMIM30A4D0T7 59 aa10.59□□□□□ -0.71
USF1-208ENST00000528768 VSTM2BA6NLU5 285 aa10.59□□□□□ -0.71
USF1-208ENST00000528768 LRRTM2O43300 516 aa10.59□□□□□ -0.71
USF1-208ENST00000528768 SELENOFO60613 162 aa10.59□□□□□ -0.71
USF1-208ENST00000528768 SC5DO75845 299 aa10.59□□□□□ -0.71
USF1-208ENST00000528768 CLDN1O95832 211 aa10.59□□□□□ -0.71
USF1-208ENST00000528768 F13BP05160 661 aa10.59□□□□□ -0.71
USF1-208ENST00000528768 KLK3P07288 261 aaPredicted RBP10.59□□□□□ -0.71
USF1-208ENST00000528768 CSF3P09919 207 aa10.59□□□□□ -0.71
USF1-208ENST00000528768 UCHL1P09936 223 aa10.59□□□□□ -0.71
USF1-208ENST00000528768 NPR2P20594 1047 aa10.59□□□□□ -0.71
USF1-208ENST00000528768 CRABP1P29762 137 aa10.59□□□□□ -0.71
USF1-208ENST00000528768 NR4A2P43354 598 aa10.59□□□□□ -0.71
USF1-208ENST00000528768 CAV3P56539 151 aa10.59□□□□□ -0.71
USF1-208ENST00000528768 RPL27P61353 136 aaKnown RBP10.59□□□□□ -0.71
USF1-208ENST00000528768 EGR4Q05215 589 aa10.59□□□□□ -0.71
USF1-208ENST00000528768 EGR3Q06889 387 aa10.59□□□□□ -0.71
USF1-208ENST00000528768 TAB1Q15750 504 aa10.59□□□□□ -0.71
USF1-208ENST00000528768 BAK1Q16611 211 aa10.59□□□□□ -0.71
USF1-208ENST00000528768 AGAP6Q5VW22 663 aa10.59□□□□□ -0.71
USF1-208ENST00000528768 PYHIN1Q6K0P9 492 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms