RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 STEAP4Q687X5 459 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 C18orf63Q68DL7 685 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 OR6B2Q6IFH4 312 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 APOBEC3HQ6NTF7 200 aaKnown RBP3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 MTFR2Q6P444 385 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 ZNF790Q6PG37 636 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 TMEM270Q6UE05 265 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 FAM151BQ6UXP7 276 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 UNQ9370/PRO34162Q6UXP9 181 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 IL34Q6ZMJ4 242 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 C9orf47Q6ZRZ4 202 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 KCTD9Q7L273 389 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 HIST3H2AQ7L7L0 130 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 LYG2Q86SG7 212 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 PARGQ86W56 976 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 COMMD2Q86X83 199 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 VRK2Q86Y07 508 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 KIR2DL5AQ8N109 375 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 HIST3H2BBQ8N257 126 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 DNAJC5GQ8N7S2 189 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 GPR26Q8NDV2 337 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 FAM71CQ8NEG0 241 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 PROKR2Q8NFJ6 384 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 STXBP6Q8NFX7 210 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 OR52E4Q8NGH9 312 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 OR4A15Q8NGL6 344 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 OR10R2Q8NGX6 335 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 HMGCLL1Q8TB92 370 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 PIGXQ8TBF5 258 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 ZNF675Q8TD23 568 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 CXorf40AQ8TE69 158 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 FAM222BQ8WU58 562 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 ABHD3Q8WU67 409 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 SDR42E1Q8WUS8 393 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 CCDC107Q8WV48 283 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 HSD17B8Q92506 261 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 HIST1H2ACQ93077 130 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 ARL11Q969Q4 196 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 ERGIC1Q969X5 290 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 SLC25A46Q96AG3 418 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 ARRDC3Q96B67 414 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 ULK4Q96C45 1275 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 CTHRC1Q96CG8 243 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 BPIFA2Q96DR5 249 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 SAT2Q96F10 170 aaPredicted RBP3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 ALG14Q96F25 216 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 GALNT14Q96FL9 552 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 CPNE2Q96FN4 548 aaPredicted RBP3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 ZNF419Q96HQ0 510 aaPredicted RBP3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 RITA1Q96K30 269 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 OR2M4Q96R27 311 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 OR2A7Q96R45 310 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 OR8B4Q96RC9 309 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 F2RL3Q96RI0 385 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 DDOQ99489 341 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 CMKLR1Q99788 373 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 REEP2Q9BRK0 252 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 NAA11Q9BSU3 229 aaPredicted RBP3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 TAPBPLQ9BX59 468 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 FGFBP2Q9BYJ0 223 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 TBL1XR1Q9BZK7 514 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 RAB33BQ9H082 229 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 TLNRD1Q9H1K6 362 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 C20orf85Q9H1P6 137 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 TMEM38AQ9H6F2 299 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 WDCPQ9H6R7 721 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 WDR55Q9H6Y2 383 aaPredicted RBP3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 LMAN1LQ9HAT1 526 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 ACKR4Q9NPB9 350 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 FZD3Q9NPG1 666 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 NMRK2Q9NPI5 230 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 UBQLN4Q9NRR5 601 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 CYSLTR2Q9NS75 346 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 CENPMQ9NSP4 180 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 C1orf109Q9NX04 203 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 WNT16Q9UBV4 365 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 PRODH2Q9UF12 536 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 CHRNA9Q9UGM1 479 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 CD84Q9UIB8 345 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 PSORS1C1Q9UIG5 152 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 SIX4Q9UIU6 781 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 HACL1Q9UJ83 578 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 FBXL4Q9UKA2 621 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 PITPNC1Q9UKF7 332 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 PADI1Q9ULC6 663 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 CAMK2AQ9UQM7 478 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 MMP24Q9Y5R2 645 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 POMT1Q9Y6A1 747 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 ASTN1O14525 1302 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 NRAPQ86VF7 1730 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 FLT4P35916 1363 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 MAST2Q6P0Q8 1798 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 PEAK1Q9H792 1746 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 A0A096LPI6 279 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 A0A0A6YYC8 382 aaPredicted RBP3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 TRAV39A0A0B4J263 110 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 A0A1W2PQL4 384 aaPredicted RBP3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 SMCO3A2RU48 225 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 AGAP14A8MT82 685 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 ISM1B1AKI9 464 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms