RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 LCKP06239 509 aa20.44■□□□□ 0.86
USP47-205ENST00000525257 ANPEPP15144 967 aa20.44■□□□□ 0.86
USP47-205ENST00000525257 PPIBP23284 216 aaKnown RBP20.44■□□□□ 0.86
USP47-205ENST00000525257 SLC6A2P23975 617 aa20.44■□□□□ 0.86
USP47-205ENST00000525257 PAGE3Q5JUK9 113 aa20.44■□□□□ 0.86
USP47-205ENST00000525257 CROCCP2Q86T23 111 aa20.44■□□□□ 0.86
USP47-205ENST00000525257 FUNDC1Q8IVP5 155 aa20.44■□□□□ 0.86
USP47-205ENST00000525257 TEX29Q8N6K0 151 aa20.44■□□□□ 0.86
USP47-205ENST00000525257 SMYD1Q8NB12 490 aa20.44■□□□□ 0.86
USP47-205ENST00000525257 ICA1LQ8NDH6 482 aa20.44■□□□□ 0.86
USP47-205ENST00000525257 BHLHE22Q8NFJ8 381 aaPredicted RBP20.44■□□□□ 0.86
USP47-205ENST00000525257 ZNF566Q969W8 418 aa20.44■□□□□ 0.86
USP47-205ENST00000525257 MCHR1Q99705 422 aa20.44■□□□□ 0.86
USP47-205ENST00000525257 RBM4Q9BWF3 364 aaKnown RBP20.44■□□□□ 0.86
USP47-205ENST00000525257 TMEM38AQ9H6F2 299 aa20.44■□□□□ 0.86
USP47-205ENST00000525257 USH1CQ9Y6N9 552 aa20.44■□□□□ 0.86
USP47-205ENST00000525257 IGLV3-9A0A075B6K5 115 aa20.43■□□□□ 0.86
USP47-205ENST00000525257 SLC22A23A1A5C7 686 aa20.43■□□□□ 0.86
USP47-205ENST00000525257 M0R3H8 397 aa20.43■□□□□ 0.86
USP47-205ENST00000525257 PLPP2O43688 288 aa20.43■□□□□ 0.86
USP47-205ENST00000525257 ZNF500O60304 480 aaPredicted RBP20.43■□□□□ 0.86
USP47-205ENST00000525257 ENTPD5O75356 428 aa20.43■□□□□ 0.86
USP47-205ENST00000525257 SERPINB7O75635 380 aa20.43■□□□□ 0.86
USP47-205ENST00000525257 ZNF250P15622 560 aa20.43■□□□□ 0.86
USP47-205ENST00000525257 ARFIP2P53365 341 aa20.43■□□□□ 0.86
USP47-205ENST00000525257 PCGF3Q3KNV8 242 aa20.43■□□□□ 0.86
USP47-205ENST00000525257 TMEM53Q6P2H8 277 aa20.43■□□□□ 0.86
USP47-205ENST00000525257 LRFN4Q6PJG9 635 aa20.43■□□□□ 0.86
USP47-205ENST00000525257 EPGNQ6UW88 154 aa20.43■□□□□ 0.86
USP47-205ENST00000525257 OR4K5Q8NGD3 323 aa20.43■□□□□ 0.86
USP47-205ENST00000525257 SGMS2Q8NHU3 365 aa20.43■□□□□ 0.86
USP47-205ENST00000525257 GTF3AQ92664 365 aaKnown RBP20.43■□□□□ 0.86
USP47-205ENST00000525257 RAB39BQ96DA2 213 aa20.43■□□□□ 0.86
USP47-205ENST00000525257 SPDL1Q96EA4 605 aa20.43■□□□□ 0.86
USP47-205ENST00000525257 JMJD8Q96S16 334 aa20.43■□□□□ 0.86
USP47-205ENST00000525257 TMPRSS13Q9BYE2 586 aa20.43■□□□□ 0.86
USP47-205ENST00000525257 SLC52A3Q9NQ40 469 aa20.43■□□□□ 0.86
USP47-205ENST00000525257 NKIRAS1Q9NYS0 192 aa20.43■□□□□ 0.86
USP47-205ENST00000525257 WNK2Q9Y3S1 2297 aa20.42■□□□□ 0.86
USP47-205ENST00000525257 A0A0G2JMP0 313 aa20.42■□□□□ 0.86
USP47-205ENST00000525257 A0A0X1KG70 313 aa20.42■□□□□ 0.86
USP47-205ENST00000525257 DHHO43323 396 aa20.42■□□□□ 0.86
USP47-205ENST00000525257 TPD52L2O43399 206 aaKnown RBP20.42■□□□□ 0.86
USP47-205ENST00000525257 RNF13O43567 381 aa20.42■□□□□ 0.86
USP47-205ENST00000525257 FARS2O95363 451 aaKnown RBP20.42■□□□□ 0.86
USP47-205ENST00000525257 CH25HO95992 272 aa20.42■□□□□ 0.86
USP47-205ENST00000525257 ADRA2CP18825 462 aa20.42■□□□□ 0.86
USP47-205ENST00000525257 GLO1Q04760 184 aa20.42■□□□□ 0.86
USP47-205ENST00000525257 BLOC1S3Q6QNY0 202 aa20.42■□□□□ 0.86
USP47-205ENST00000525257 LINC00114Q6XXX2 140 aa20.42■□□□□ 0.86
USP47-205ENST00000525257 C1QL2Q7Z5L3 287 aa20.42■□□□□ 0.86
USP47-205ENST00000525257 HIPK4Q8NE63 616 aa20.42■□□□□ 0.86
USP47-205ENST00000525257 OR4M2Q8NGB6 313 aa20.42■□□□□ 0.86
USP47-205ENST00000525257 ZNF519Q8TB69 540 aa20.42■□□□□ 0.86
USP47-205ENST00000525257 C11orf40Q8WZ69 217 aa20.42■□□□□ 0.86
USP47-205ENST00000525257 SLC25A44Q96H78 314 aaPredicted RBP20.42■□□□□ 0.86
USP47-205ENST00000525257 SLC6A7Q99884 636 aa20.42■□□□□ 0.86
USP47-205ENST00000525257 SLCO1C1Q9NYB5 712 aa20.42■□□□□ 0.86
USP47-205ENST00000525257 TAS2R5Q9NYW4 299 aa20.42■□□□□ 0.86
USP47-205ENST00000525257 CCDC167Q9P0B6 97 aa20.42■□□□□ 0.86
USP47-205ENST00000525257 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.42■□□□□ 0.86
USP47-205ENST00000525257 PKD1L1Q8TDX9 2849 aa20.42■□□□□ 0.86
USP47-205ENST00000525257 TRBV5-3A0A0A0MS03 114 aa20.41■□□□□ 0.86
USP47-205ENST00000525257 IGHV1-69-2A0A0G2JMI3 117 aa20.41■□□□□ 0.86
USP47-205ENST00000525257 CPSF4LA6NMK7 179 aaKnown RBP20.41■□□□□ 0.86
USP47-205ENST00000525257 CHP2O43745 196 aa20.41■□□□□ 0.86
USP47-205ENST00000525257 DEAF1O75398 565 aaPredicted RBP20.41■□□□□ 0.86
USP47-205ENST00000525257 MFN2O95140 757 aa20.41■□□□□ 0.86
USP47-205ENST00000525257 CRYBB2P43320 205 aa20.41■□□□□ 0.86
USP47-205ENST00000525257 MRPL19P49406 292 aaKnown RBP20.41■□□□□ 0.86
USP47-205ENST00000525257 ZNF74Q16587 644 aa20.41■□□□□ 0.86
USP47-205ENST00000525257 TBC1D28Q2M2D7 210 aa20.41■□□□□ 0.86
USP47-205ENST00000525257 MMEL1Q495T6 779 aa20.41■□□□□ 0.86
USP47-205ENST00000525257 ZNF613Q6PF04 617 aa20.41■□□□□ 0.86
USP47-205ENST00000525257 USP51Q70EK9 711 aa20.41■□□□□ 0.86
USP47-205ENST00000525257 SUCNR1Q9BXA5 334 aa20.41■□□□□ 0.86
USP47-205ENST00000525257 C1orf198Q9H425 327 aa20.41■□□□□ 0.86
USP47-205ENST00000525257 EVA1AQ9H8M9 152 aa20.41■□□□□ 0.86
USP47-205ENST00000525257 TCF7L2Q9NQB0 619 aa20.41■□□□□ 0.86
USP47-205ENST00000525257 NKIRAS2Q9NYR9 191 aa20.41■□□□□ 0.86
USP47-205ENST00000525257 ANGPT4Q9Y264 503 aa20.41■□□□□ 0.86
USP47-205ENST00000525257 WIPI2Q9Y4P8 454 aa20.41■□□□□ 0.86
USP47-205ENST00000525257 CACNG2Q9Y698 323 aa20.41■□□□□ 0.86
USP47-205ENST00000525257 CLDN25C9JDP6 229 aa20.4■□□□□ 0.86
USP47-205ENST00000525257 KPNA4O00629 521 aaPredicted RBP20.4■□□□□ 0.86
USP47-205ENST00000525257 POLR3GO15318 223 aaPredicted RBP20.4■□□□□ 0.86
USP47-205ENST00000525257 IGHV2-5P01817 119 aa20.4■□□□□ 0.86
USP47-205ENST00000525257 OPN1SWP03999 348 aa20.4■□□□□ 0.86
USP47-205ENST00000525257 QDPRP09417 244 aa20.4■□□□□ 0.86
USP47-205ENST00000525257 PGA4P0DJD7 388 aa20.4■□□□□ 0.86
USP47-205ENST00000525257 PGA3P0DJD8 388 aa20.4■□□□□ 0.86
USP47-205ENST00000525257 RAD52P43351 418 aa20.4■□□□□ 0.86
USP47-205ENST00000525257 TEKQ02763 1124 aa20.4■□□□□ 0.86
USP47-205ENST00000525257 ZP4Q12836 540 aa20.4■□□□□ 0.86
USP47-205ENST00000525257 TSTQ16762 297 aaKnown RBP20.4■□□□□ 0.86
USP47-205ENST00000525257 SLC36A2Q495M3 483 aa20.4■□□□□ 0.86
USP47-205ENST00000525257 SLC16A14Q7RTX9 510 aa20.4■□□□□ 0.86
USP47-205ENST00000525257 LRRC17Q8N6Y2 441 aa20.4■□□□□ 0.86
USP47-205ENST00000525257 ARHGDIGQ99819 225 aa20.4■□□□□ 0.86
USP47-205ENST00000525257 NANSQ9NR45 359 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms