RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 ACTR1AP61163 376 aa11.95□□□□□ -0.5
CAPN1-202ENST00000524773 TBC1D3CQ6IPX1 549 aa11.95□□□□□ -0.5
CAPN1-202ENST00000524773 HSD17B13Q7Z5P4 300 aaPredicted RBP11.95□□□□□ -0.5
CAPN1-202ENST00000524773 TBC1D3Q8IZP1 549 aaPredicted RBP11.95□□□□□ -0.5
CAPN1-202ENST00000524773 RCBTB1Q8NDN9 531 aa11.95□□□□□ -0.5
CAPN1-202ENST00000524773 OR1S2Q8NGQ3 325 aa11.95□□□□□ -0.5
CAPN1-202ENST00000524773 OR9A4Q8NGU2 314 aa11.95□□□□□ -0.5
CAPN1-202ENST00000524773 DUSP22Q9NRW4 184 aa11.95□□□□□ -0.5
CAPN1-202ENST00000524773 PILRAQ9UKJ1 303 aa11.95□□□□□ -0.5
CAPN1-202ENST00000524773 CDV3Q9UKY7 258 aaKnown RBP11.95□□□□□ -0.5
CAPN1-202ENST00000524773 TUBAL3A6NHL2 446 aa11.95□□□□□ -0.5
CAPN1-202ENST00000524773 XRCC3O43542 346 aa11.95□□□□□ -0.5
CAPN1-202ENST00000524773 NDUFA2O43678 99 aa11.95□□□□□ -0.5
CAPN1-202ENST00000524773 KCNJ13O60928 360 aa11.95□□□□□ -0.5
CAPN1-202ENST00000524773 WNT11O96014 354 aa11.95□□□□□ -0.5
CAPN1-202ENST00000524773 AMY2AP04746 511 aa11.95□□□□□ -0.5
CAPN1-202ENST00000524773 RAB40ALP0C0E4 278 aa11.95□□□□□ -0.5
CAPN1-202ENST00000524773 OR4E1P0C645 316 aa11.95□□□□□ -0.5
CAPN1-202ENST00000524773 ATP1B3P54709 279 aa11.95□□□□□ -0.5
CAPN1-202ENST00000524773 MOGAT2Q3SYC2 334 aa11.95□□□□□ -0.5
CAPN1-202ENST00000524773 ZNF542PQ5EBM4 170 aa11.95□□□□□ -0.5
CAPN1-202ENST00000524773 STEAP1BQ6NZ63 245 aa11.95□□□□□ -0.5
CAPN1-202ENST00000524773 CBLN3Q6UW01 205 aa11.95□□□□□ -0.5
CAPN1-202ENST00000524773 RTL10Q7L3V2 364 aa11.95□□□□□ -0.5
CAPN1-202ENST00000524773 FAM220AQ7Z4H9 259 aa11.95□□□□□ -0.5
CAPN1-202ENST00000524773 RAB40AQ8WXH6 277 aa11.95□□□□□ -0.5
CAPN1-202ENST00000524773 SERINC2Q96SA4 455 aa11.95□□□□□ -0.5
CAPN1-202ENST00000524773 VRK1Q99986 396 aaPredicted RBP11.95□□□□□ -0.5
CAPN1-202ENST00000524773 ZNF426Q9BUY5 554 aa11.95□□□□□ -0.5
CAPN1-202ENST00000524773 HDAC8Q9BY41 377 aa11.95□□□□□ -0.5
CAPN1-202ENST00000524773 KCNG2Q9UJ96 466 aa11.95□□□□□ -0.5
CAPN1-202ENST00000524773 LAMP5Q9UJQ1 280 aa11.95□□□□□ -0.5
CAPN1-202ENST00000524773 DCDC2BA2VCK2 349 aa11.94□□□□□ -0.5
CAPN1-202ENST00000524773 C11orf98E9PRG8 122 aa11.94□□□□□ -0.5
CAPN1-202ENST00000524773 GPRIN2O60269 458 aa11.94□□□□□ -0.5
CAPN1-202ENST00000524773 GPR75O95800 540 aa11.94□□□□□ -0.5
CAPN1-202ENST00000524773 HLA-DQA2P01906 255 aa11.94□□□□□ -0.5
CAPN1-202ENST00000524773 AVPR2P30518 371 aa11.94□□□□□ -0.5
CAPN1-202ENST00000524773 GMFBP60983 142 aa11.94□□□□□ -0.5
CAPN1-202ENST00000524773 AKIRIN2Q53H80 203 aa11.94□□□□□ -0.5
CAPN1-202ENST00000524773 FIGLAQ6QHK4 219 aa11.94□□□□□ -0.5
CAPN1-202ENST00000524773 JAZF1Q86VZ6 243 aa11.94□□□□□ -0.5
CAPN1-202ENST00000524773 PARGQ86W56 976 aa11.94□□□□□ -0.5
CAPN1-202ENST00000524773 CASTOR1Q8WTX7 329 aa11.94□□□□□ -0.5
CAPN1-202ENST00000524773 CMBLQ96DG6 245 aa11.94□□□□□ -0.5
CAPN1-202ENST00000524773 CPNE2Q96FN4 548 aaPredicted RBP11.94□□□□□ -0.5
CAPN1-202ENST00000524773 MYADMQ96S97 322 aa11.94□□□□□ -0.5
CAPN1-202ENST00000524773 SYT4Q9H2B2 425 aa11.94□□□□□ -0.5
CAPN1-202ENST00000524773 PRR13Q9NZ81 148 aa11.94□□□□□ -0.5
CAPN1-202ENST00000524773 ASCC3Q8N3C0 2202 aaKnown RBP11.94□□□□□ -0.5
CAPN1-202ENST00000524773 OR5H14A6NHG9 310 aa11.94□□□□□ -0.5
CAPN1-202ENST00000524773 TGFBR3LH3BV60 316 aa11.94□□□□□ -0.5
CAPN1-202ENST00000524773 CSTAP01040 98 aa11.94□□□□□ -0.5
CAPN1-202ENST00000524773 RPS15AP62244 130 aaKnown RBP11.94□□□□□ -0.5
CAPN1-202ENST00000524773 PDGFRLQ15198 375 aa11.94□□□□□ -0.5
CAPN1-202ENST00000524773 MEP1BQ16820 701 aa11.94□□□□□ -0.5
CAPN1-202ENST00000524773 OR2W3Q7Z3T1 314 aa11.94□□□□□ -0.5
CAPN1-202ENST00000524773 PUSL1Q8N0Z8 303 aaKnown RBP11.94□□□□□ -0.5
CAPN1-202ENST00000524773 OR2G2Q8NGZ5 317 aa11.94□□□□□ -0.5
CAPN1-202ENST00000524773 OR1E3Q8WZA6 343 aa11.94□□□□□ -0.5
CAPN1-202ENST00000524773 NOP16Q9Y3C1 178 aaKnown RBP11.94□□□□□ -0.5
CAPN1-202ENST00000524773 SDK1Q7Z5N4 2213 aa11.94□□□□□ -0.5
CAPN1-202ENST00000524773 OR6C76A6NM76 312 aa11.94□□□□□ -0.5
CAPN1-202ENST00000524773 CYR61O00622 381 aa11.94□□□□□ -0.5
CAPN1-202ENST00000524773 GLCEO94923 617 aa11.94□□□□□ -0.5
CAPN1-202ENST00000524773 CAPZA1P52907 286 aa11.94□□□□□ -0.5
CAPN1-202ENST00000524773 GGTLC2Q14390 218 aa11.94□□□□□ -0.5
CAPN1-202ENST00000524773 ZNF684Q5T5D7 378 aa11.94□□□□□ -0.5
CAPN1-202ENST00000524773 C1QL3Q5VWW1 255 aa11.94□□□□□ -0.5
CAPN1-202ENST00000524773 ASPHD2Q6ICH7 369 aa11.94□□□□□ -0.5
CAPN1-202ENST00000524773 ULK3Q6PHR2 472 aa11.94□□□□□ -0.5
CAPN1-202ENST00000524773 NPSR1Q6W5P4 371 aa11.94□□□□□ -0.5
CAPN1-202ENST00000524773 ZNF227Q86WZ6 799 aa11.94□□□□□ -0.5
CAPN1-202ENST00000524773 C12orf45Q8N5I9 185 aaPredicted RBP11.94□□□□□ -0.5
CAPN1-202ENST00000524773 OR51A2Q8NGJ7 313 aa11.94□□□□□ -0.5
CAPN1-202ENST00000524773 OR6N1Q8NGY5 312 aa11.94□□□□□ -0.5
CAPN1-202ENST00000524773 SP7Q8TDD2 431 aaPredicted RBP11.94□□□□□ -0.5
CAPN1-202ENST00000524773 C3orf49Q96BT1 292 aa11.94□□□□□ -0.5
CAPN1-202ENST00000524773 SLC17A9Q9BYT1 436 aa11.94□□□□□ -0.5
CAPN1-202ENST00000524773 BARX1Q9HBU1 254 aaPredicted RBP11.94□□□□□ -0.5
CAPN1-202ENST00000524773 CEP290O15078 2479 aa11.94□□□□□ -0.5
CAPN1-202ENST00000524773 IGKV1D-42A0A075B6H8 117 aa11.93□□□□□ -0.5
CAPN1-202ENST00000524773 DISC1C4P0D8 188 aa11.93□□□□□ -0.5
CAPN1-202ENST00000524773 EEF1E1-BLOC1S5C9J1V9 151 aa11.93□□□□□ -0.5
CAPN1-202ENST00000524773 LMX1BO60663 402 aa11.93□□□□□ -0.5
CAPN1-202ENST00000524773 AKAIN1P0CW23 69 aa11.93□□□□□ -0.5
CAPN1-202ENST00000524773 CALCBP10092 127 aa11.93□□□□□ -0.5
CAPN1-202ENST00000524773 ADCYAP1P18509 176 aa11.93□□□□□ -0.5
CAPN1-202ENST00000524773 PRSS3P35030 304 aa11.93□□□□□ -0.5
CAPN1-202ENST00000524773 BTG2P78543 158 aa11.93□□□□□ -0.5
CAPN1-202ENST00000524773 WDR38Q5JTN6 314 aa11.93□□□□□ -0.5
CAPN1-202ENST00000524773 KCTD9Q7L273 389 aa11.93□□□□□ -0.5
CAPN1-202ENST00000524773 GABRG1Q8N1C3 465 aa11.93□□□□□ -0.5
CAPN1-202ENST00000524773 OR6K3Q8NGY3 331 aa11.93□□□□□ -0.5
CAPN1-202ENST00000524773 ANKRD9Q96BM1 317 aaPredicted RBP11.93□□□□□ -0.5
CAPN1-202ENST00000524773 TSNAXQ99598 290 aaKnown RBP11.93□□□□□ -0.5
CAPN1-202ENST00000524773 APOOQ9BUR5 198 aa11.93□□□□□ -0.5
CAPN1-202ENST00000524773 RAB11FIP5Q9BXF6 653 aa11.93□□□□□ -0.5
CAPN1-202ENST00000524773 PCDHB10Q9UN67 800 aa11.93□□□□□ -0.5
CAPN1-202ENST00000524773 RTTNQ86VV8 2226 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms