RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 IGHMP01871 453 aa15.52■□□□□ 0.08
CLK4-211ENST00000522556 FABP3P05413 133 aa15.52■□□□□ 0.08
CLK4-211ENST00000522556 CD79AP11912 226 aa15.52■□□□□ 0.08
CLK4-211ENST00000522556 CLRN1P58418 232 aa15.52■□□□□ 0.08
CLK4-211ENST00000522556 LCN6P62502 163 aa15.52■□□□□ 0.08
CLK4-211ENST00000522556 NAAAQ02083 359 aa15.52■□□□□ 0.08
CLK4-211ENST00000522556 HIST3H3Q16695 136 aa15.52■□□□□ 0.08
CLK4-211ENST00000522556 LCN8Q6JVE9 175 aa15.52■□□□□ 0.08
CLK4-211ENST00000522556 THSD4Q6ZMP0 1018 aa15.52■□□□□ 0.08
CLK4-211ENST00000522556 TMPRSS11FQ6ZWK6 438 aa15.52■□□□□ 0.08
CLK4-211ENST00000522556 TGIF2LYQ8IUE0 185 aa15.52■□□□□ 0.08
CLK4-211ENST00000522556 ZDHHC21Q8IVQ6 265 aa15.52■□□□□ 0.08
CLK4-211ENST00000522556 SKA3Q8IX90 412 aa15.52■□□□□ 0.08
CLK4-211ENST00000522556 RNF113BQ8IZP6 322 aaKnown RBP15.52■□□□□ 0.08
CLK4-211ENST00000522556 ZNF519Q8TB69 540 aa15.52■□□□□ 0.08
CLK4-211ENST00000522556 SLC7A6OSQ96CW6 309 aaPredicted RBP15.52■□□□□ 0.08
CLK4-211ENST00000522556 SH3GL3Q99963 347 aa15.52■□□□□ 0.08
CLK4-211ENST00000522556 TRAF4Q9BUZ4 470 aaPredicted RBP15.52■□□□□ 0.08
CLK4-211ENST00000522556 KATNB1Q9BVA0 655 aa15.52■□□□□ 0.08
CLK4-211ENST00000522556 TXNIPQ9H3M7 391 aa15.52■□□□□ 0.08
CLK4-211ENST00000522556 TMEM38BQ9NVV0 291 aa15.52■□□□□ 0.08
CLK4-211ENST00000522556 ATP23Q9Y6H3 246 aa15.52■□□□□ 0.08
CLK4-211ENST00000522556 SH3PXD2BA1X283 911 aa15.51■□□□□ 0.07
CLK4-211ENST00000522556 OVOL3O00110 214 aa15.51■□□□□ 0.07
CLK4-211ENST00000522556 IMPA2O14732 288 aa15.51■□□□□ 0.07
CLK4-211ENST00000522556 CBR1P16152 277 aa15.51■□□□□ 0.07
CLK4-211ENST00000522556 RRM2P31350 389 aa15.51■□□□□ 0.07
CLK4-211ENST00000522556 CDAP32320 146 aa15.51■□□□□ 0.07
CLK4-211ENST00000522556 SLC9A3P48764 834 aa15.51■□□□□ 0.07
CLK4-211ENST00000522556 DAP3P51398 398 aaKnown RBP15.51■□□□□ 0.07
CLK4-211ENST00000522556 ERVK-25P63136 954 aa15.51■□□□□ 0.07
CLK4-211ENST00000522556 PPP1R8Q12972 351 aaKnown RBP15.51■□□□□ 0.07
CLK4-211ENST00000522556 SPATS1Q496A3 300 aa15.51■□□□□ 0.07
CLK4-211ENST00000522556 DTX2Q86UW9 622 aa15.51■□□□□ 0.07
CLK4-211ENST00000522556 KCNK17Q96T54 332 aa15.51■□□□□ 0.07
CLK4-211ENST00000522556 THTPAQ9BU02 230 aa15.51■□□□□ 0.07
CLK4-211ENST00000522556 IL1RAPQ9NPH3 570 aa15.51■□□□□ 0.07
CLK4-211ENST00000522556 ZNF701Q9NV72 531 aaPredicted RBP15.51■□□□□ 0.07
CLK4-211ENST00000522556 VNN3Q9NY84 501 aa15.51■□□□□ 0.07
CLK4-211ENST00000522556 MGAT4BQ9UQ53 548 aa15.51■□□□□ 0.07
CLK4-211ENST00000522556 SIGLEC7Q9Y286 467 aa15.51■□□□□ 0.07
CLK4-211ENST00000522556 UGT2A1Q9Y4X1 527 aa15.51■□□□□ 0.07
CLK4-211ENST00000522556 GADD45GO95257 159 aa15.5■□□□□ 0.07
CLK4-211ENST00000522556 ACVR1BP36896 505 aa15.5■□□□□ 0.07
CLK4-211ENST00000522556 GIPRP48546 466 aa15.5■□□□□ 0.07
CLK4-211ENST00000522556 RPL27P61353 136 aaKnown RBP15.5■□□□□ 0.07
CLK4-211ENST00000522556 HGFACQ04756 655 aa15.5■□□□□ 0.07
CLK4-211ENST00000522556 CD47Q08722 323 aa15.5■□□□□ 0.07
CLK4-211ENST00000522556 DBPQ10586 325 aaPredicted RBP15.5■□□□□ 0.07
CLK4-211ENST00000522556 TRIM25Q14258 630 aaKnown RBP15.5■□□□□ 0.07
CLK4-211ENST00000522556 ZBED5Q49AG3 693 aa15.5■□□□□ 0.07
CLK4-211ENST00000522556 C11orf71Q6IPW1 123 aa15.5■□□□□ 0.07
CLK4-211ENST00000522556 ZER1Q7Z7L7 766 aa15.5■□□□□ 0.07
CLK4-211ENST00000522556 DHFR2Q86XF0 187 aa15.5■□□□□ 0.07
CLK4-211ENST00000522556 SLC22A24Q8N4F4 322 aa15.5■□□□□ 0.07
CLK4-211ENST00000522556 NSMAFQ92636 917 aa15.5■□□□□ 0.07
CLK4-211ENST00000522556 RSRC1Q96IZ7 334 aaKnown RBP15.5■□□□□ 0.07
CLK4-211ENST00000522556 Q96M85 177 aa15.5■□□□□ 0.07
CLK4-211ENST00000522556 DHRS9Q9BPW9 319 aa15.5■□□□□ 0.07
CLK4-211ENST00000522556 TMUB1Q9BVT8 246 aa15.5■□□□□ 0.07
CLK4-211ENST00000522556 GSX2Q9BZM3 304 aa15.5■□□□□ 0.07
CLK4-211ENST00000522556 GDF2Q9UK05 429 aaPredicted RBP15.5■□□□□ 0.07
CLK4-211ENST00000522556 PRPF19Q9UMS4 504 aaKnown RBP15.5■□□□□ 0.07
CLK4-211ENST00000522556 VPS13CQ709C8 3753 aa15.5■□□□□ 0.07
CLK4-211ENST00000522556 MAP1AP78559 2803 aaPredicted RBP15.49■□□□□ 0.07
CLK4-211ENST00000522556 IGHV2OR16-5A0A0B4J2B6 119 aa15.49■□□□□ 0.07
CLK4-211ENST00000522556 NPIPB13A6NJU9 1138 aa15.49■□□□□ 0.07
CLK4-211ENST00000522556 NPIPB4C9JG80 1138 aa15.49■□□□□ 0.07
CLK4-211ENST00000522556 ACOT8O14734 319 aa15.49■□□□□ 0.07
CLK4-211ENST00000522556 PTP4A3O75365 173 aa15.49■□□□□ 0.07
CLK4-211ENST00000522556 HOXB1P14653 301 aaPredicted RBP15.49■□□□□ 0.07
CLK4-211ENST00000522556 TTKP33981 857 aa15.49■□□□□ 0.07
CLK4-211ENST00000522556 MAGEA2P43356 314 aa15.49■□□□□ 0.07
CLK4-211ENST00000522556 PTDSS1P48651 473 aaKnown RBP15.49■□□□□ 0.07
CLK4-211ENST00000522556 ZNF133P52736 654 aaPredicted RBP15.49■□□□□ 0.07
CLK4-211ENST00000522556 GSG1Q2KHT4 349 aa15.49■□□□□ 0.07
CLK4-211ENST00000522556 MESTQ5EB52 335 aa15.49■□□□□ 0.07
CLK4-211ENST00000522556 RRM2BQ7LG56 351 aa15.49■□□□□ 0.07
CLK4-211ENST00000522556 FAM122BQ7Z309 247 aa15.49■□□□□ 0.07
CLK4-211ENST00000522556 ZNF584Q8IVC4 421 aa15.49■□□□□ 0.07
CLK4-211ENST00000522556 LRRC75A-AS1Q8N1F1 130 aa15.49■□□□□ 0.07
CLK4-211ENST00000522556 ARHGAP24Q8N264 748 aa15.49■□□□□ 0.07
CLK4-211ENST00000522556 MCUR1Q96AQ8 359 aa15.49■□□□□ 0.07
CLK4-211ENST00000522556 RASD2Q96D21 266 aa15.49■□□□□ 0.07
CLK4-211ENST00000522556 Q96MF0 132 aa15.49■□□□□ 0.07
CLK4-211ENST00000522556 C1orf21Q9H246 121 aa15.49■□□□□ 0.07
CLK4-211ENST00000522556 TMEM5Q9Y2B1 443 aa15.49■□□□□ 0.07
CLK4-211ENST00000522556 ARFGEF3Q5TH69 2177 aa15.48■□□□□ 0.07
CLK4-211ENST00000522556 HTR3EA5X5Y0 456 aa15.48■□□□□ 0.07
CLK4-211ENST00000522556 TRIM64A6NGJ6 449 aa15.48■□□□□ 0.07
CLK4-211ENST00000522556 TRIM64BA6NI03 449 aa15.48■□□□□ 0.07
CLK4-211ENST00000522556 ZNF14P17017 642 aaPredicted RBP15.48■□□□□ 0.07
CLK4-211ENST00000522556 ITGA2P17301 1181 aa15.48■□□□□ 0.07
CLK4-211ENST00000522556 RPL4P36578 427 aaKnown RBP15.48■□□□□ 0.07
CLK4-211ENST00000522556 ERFP50548 548 aa15.48■□□□□ 0.07
CLK4-211ENST00000522556 FABP6P51161 128 aa15.48■□□□□ 0.07
CLK4-211ENST00000522556 ATP5J2P56134 94 aa15.48■□□□□ 0.07
CLK4-211ENST00000522556 RAB39AQ14964 217 aa15.48■□□□□ 0.07
CLK4-211ENST00000522556 MSMPQ1L6U9 139 aa15.48■□□□□ 0.07
CLK4-211ENST00000522556 C10orf128Q5T292 105 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms