RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 WASH6PQ9NQA3 447 aa12.69□□□□□ -0.38
SYNPO-205ENST00000522122 LINC01553A4QN01 128 aa12.69□□□□□ -0.38
SYNPO-205ENST00000522122 TBX19O60806 448 aa12.69□□□□□ -0.38
SYNPO-205ENST00000522122 EPHA1P21709 976 aa12.69□□□□□ -0.38
SYNPO-205ENST00000522122 ATP1B3P54709 279 aa12.69□□□□□ -0.38
SYNPO-205ENST00000522122 DUSP8Q13202 625 aa12.69□□□□□ -0.38
SYNPO-205ENST00000522122 AADACL4Q5VUY2 407 aa12.69□□□□□ -0.38
SYNPO-205ENST00000522122 GLCCI1Q86VQ1 547 aa12.69□□□□□ -0.38
SYNPO-205ENST00000522122 HHIPL1Q96JK4 782 aa12.69□□□□□ -0.38
SYNPO-205ENST00000522122 CMSS1Q9BQ75 279 aaKnown RBP12.69□□□□□ -0.38
SYNPO-205ENST00000522122 CHST2Q9Y4C5 530 aa12.69□□□□□ -0.38
SYNPO-205ENST00000522122 GABARAPH6UMI1 98 aa12.68□□□□□ -0.38
SYNPO-205ENST00000522122 FBXO24O75426 580 aa12.68□□□□□ -0.38
SYNPO-205ENST00000522122 WDPCPO95876 746 aa12.68□□□□□ -0.38
SYNPO-205ENST00000522122 CD79AP11912 226 aa12.68□□□□□ -0.38
SYNPO-205ENST00000522122 SOX18P35713 384 aa12.68□□□□□ -0.38
SYNPO-205ENST00000522122 MELKQ14680 651 aa12.68□□□□□ -0.38
SYNPO-205ENST00000522122 MLC1Q15049 377 aa12.68□□□□□ -0.38
SYNPO-205ENST00000522122 CDKN3Q16667 212 aa12.68□□□□□ -0.38
SYNPO-205ENST00000522122 CLPPQ16740 277 aaPredicted RBP12.68□□□□□ -0.38
SYNPO-205ENST00000522122 Q6ZTK2 550 aa12.68□□□□□ -0.38
SYNPO-205ENST00000522122 SLC51BQ86UW2 128 aa12.68□□□□□ -0.38
SYNPO-205ENST00000522122 OR10K1Q8NGX5 313 aa12.68□□□□□ -0.38
SYNPO-205ENST00000522122 TCTEX1D2Q8WW35 142 aa12.68□□□□□ -0.38
SYNPO-205ENST00000522122 GPR55Q9Y2T6 319 aaPredicted RBP12.68□□□□□ -0.38
SYNPO-205ENST00000522122 ZC3H12DA2A288 527 aaKnown RBP12.68□□□□□ -0.38
SYNPO-205ENST00000522122 PRICKLE3O43900 615 aaPredicted RBP12.68□□□□□ -0.38
SYNPO-205ENST00000522122 RAB6AP20340 208 aa12.68□□□□□ -0.38
SYNPO-205ENST00000522122 PEA15Q15121 130 aa12.68□□□□□ -0.38
SYNPO-205ENST00000522122 NIPAL3Q6P499 406 aa12.68□□□□□ -0.38
SYNPO-205ENST00000522122 MKXQ8IYA7 352 aa12.68□□□□□ -0.38
SYNPO-205ENST00000522122 SLC37A2Q8TED4 501 aa12.68□□□□□ -0.38
SYNPO-205ENST00000522122 MIB2Q96AX9 1013 aa12.68□□□□□ -0.38
SYNPO-205ENST00000522122 SLC6A17Q9H1V8 727 aa12.68□□□□□ -0.38
SYNPO-205ENST00000522122 KCND3Q9UK17 655 aa12.68□□□□□ -0.38
SYNPO-205ENST00000522122 WDR90Q96KV7 1748 aa12.68□□□□□ -0.38
SYNPO-205ENST00000522122 LOC100289279A0A1B0GTE1 492 aa12.68□□□□□ -0.38
SYNPO-205ENST00000522122 A8MVM7 634 aa12.68□□□□□ -0.38
SYNPO-205ENST00000522122 IFNA17P01571 189 aa12.68□□□□□ -0.38
SYNPO-205ENST00000522122 PRKACAP17612 351 aa12.68□□□□□ -0.38
SYNPO-205ENST00000522122 FGF9P31371 208 aaPredicted RBP12.68□□□□□ -0.38
SYNPO-205ENST00000522122 HSD17B7P56937 341 aa12.68□□□□□ -0.38
SYNPO-205ENST00000522122 KIAA1024LP59773 190 aa12.68□□□□□ -0.38
SYNPO-205ENST00000522122 CDK5Q00535 292 aa12.68□□□□□ -0.38
SYNPO-205ENST00000522122 SPNS1Q9H2V7 528 aa12.68□□□□□ -0.38
SYNPO-205ENST00000522122 SLC23A2Q9UGH3 650 aa12.68□□□□□ -0.38
SYNPO-205ENST00000522122 CD300LDQ6UXZ3 194 aa12.68□□□□□ -0.38
SYNPO-205ENST00000522122 SLC22A24Q8N4F4 322 aa12.68□□□□□ -0.38
SYNPO-205ENST00000522122 ESX1Q8N693 406 aa12.68□□□□□ -0.38
SYNPO-205ENST00000522122 OR13H1Q8NG92 308 aa12.68□□□□□ -0.38
SYNPO-205ENST00000522122 DVL3Q92997 716 aaPredicted RBP12.68□□□□□ -0.38
SYNPO-205ENST00000522122 UCN3Q969E3 161 aa12.68□□□□□ -0.38
SYNPO-205ENST00000522122 RSPRY1Q96DX4 576 aa12.68□□□□□ -0.38
SYNPO-205ENST00000522122 LINC00615Q96LM1 132 aaPredicted RBP12.68□□□□□ -0.38
SYNPO-205ENST00000522122 DUSP23Q9BVJ7 150 aa12.68□□□□□ -0.38
SYNPO-205ENST00000522122 HINT2Q9BX68 163 aa12.68□□□□□ -0.38
SYNPO-205ENST00000522122 GSX2Q9BZM3 304 aa12.68□□□□□ -0.38
SYNPO-205ENST00000522122 A0A1W2PS29 197 aa12.67□□□□□ -0.38
SYNPO-205ENST00000522122 ZNF254O75437 659 aa12.67□□□□□ -0.38
SYNPO-205ENST00000522122 DYRK1AQ13627 763 aa12.67□□□□□ -0.38
SYNPO-205ENST00000522122 BCL2A1Q16548 175 aa12.67□□□□□ -0.38
SYNPO-205ENST00000522122 ANKRD33Q7Z3H0 272 aa12.67□□□□□ -0.38
SYNPO-205ENST00000522122 ZMAT3Q9HA38 289 aaKnown RBP12.67□□□□□ -0.38
SYNPO-205ENST00000522122 MRPS28Q9Y2Q9 187 aaKnown RBP12.67□□□□□ -0.38
SYNPO-205ENST00000522122 TGM6O95932 706 aa12.67□□□□□ -0.38
SYNPO-205ENST00000522122 LALBAP00709 142 aa12.67□□□□□ -0.38
SYNPO-205ENST00000522122 EIF4EP06730 217 aaKnown RBP12.67□□□□□ -0.38
SYNPO-205ENST00000522122 C14orf28Q4W4Y0 310 aa12.67□□□□□ -0.38
SYNPO-205ENST00000522122 LINC00346Q8IVM7 164 aa12.67□□□□□ -0.38
SYNPO-205ENST00000522122 PLPP7Q8NBV4 271 aa12.67□□□□□ -0.38
SYNPO-205ENST00000522122 NAT6Q93015 286 aa12.67□□□□□ -0.38
SYNPO-205ENST00000522122 FGF21Q9NSA1 209 aa12.67□□□□□ -0.38
SYNPO-205ENST00000522122 ACOXLQ9NUZ1 547 aa12.67□□□□□ -0.38
SYNPO-205ENST00000522122 TLCD2A6NGC4 264 aa12.67□□□□□ -0.38
SYNPO-205ENST00000522122 AGAP14A8MT82 685 aa12.67□□□□□ -0.38
SYNPO-205ENST00000522122 RFXAPO00287 272 aa12.67□□□□□ -0.38
SYNPO-205ENST00000522122 P2RY10O00398 339 aa12.67□□□□□ -0.38
SYNPO-205ENST00000522122 PMS2P2O95744 297 aa12.67□□□□□ -0.38
SYNPO-205ENST00000522122 CXCL12P48061 93 aa12.67□□□□□ -0.38
SYNPO-205ENST00000522122 ULBP3Q9BZM4 244 aa12.67□□□□□ -0.38
SYNPO-205ENST00000522122 METTL9Q9H1A3 318 aa12.67□□□□□ -0.38
SYNPO-205ENST00000522122 LUZP4Q9P127 313 aa12.67□□□□□ -0.38
SYNPO-205ENST00000522122 FGF17O60258 216 aa12.67□□□□□ -0.38
SYNPO-205ENST00000522122 DOK2O60496 412 aa12.67□□□□□ -0.38
SYNPO-205ENST00000522122 BIDP55957 195 aa12.67□□□□□ -0.38
SYNPO-205ENST00000522122 PCBD1P61457 104 aa12.67□□□□□ -0.38
SYNPO-205ENST00000522122 PRR18Q8N4B5 295 aa12.67□□□□□ -0.38
SYNPO-205ENST00000522122 ATPIF1Q9UII2 106 aa12.67□□□□□ -0.38
SYNPO-205ENST00000522122 HS3ST3A1Q9Y663 406 aa12.67□□□□□ -0.38
SYNPO-205ENST00000522122 OR5K3A6NET4 321 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 POM121BA6NF01 834 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 K7EPK0 472 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 M0QYG6 137 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 ADPRHP54922 357 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 ECH1Q13011 328 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 HEPHL1Q6MZM0 1159 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 FAM71E2Q8N5Q1 922 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 ZFPM2Q8WW38 1151 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 PIGCQ92535 297 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 MCTS1Q9ULC4 181 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms