RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 ST6GALNAC6Q969X2 333 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 SPDL1Q96EA4 605 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 RITA1Q96K30 269 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 CCDC42Q96M95 316 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 SFXN2Q96NB2 322 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 COL21A1Q96P44 957 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 FEVQ99581 238 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 NDNQ99608 321 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 RHOXF2Q9BQY4 288 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 OSBPL11Q9BXB4 747 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 ERVK-6Q9BXR3 956 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 ZNF717Q9BY31 904 aaPredicted RBP3.2□□□□□ -1.9
VPS13B-208ENST00000521037 RAD21L1Q9H4I0 556 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 PPP1R3EQ9H7J1 279 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 ACTR8Q9H981 624 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 SPAG4Q9NPE6 437 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 DNAJC11Q9NVH1 559 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 SLCO1C1Q9NYB5 712 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 UTP6Q9NYH9 597 aaKnown RBP3.2□□□□□ -1.9
VPS13B-208ENST00000521037 GAGE2DQ9UEU5 116 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 GUCA1BQ9UMX6 200 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 SNX12Q9UMY4 172 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 RABL2BQ9UNT1 228 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 ERVK-19Q9WJR5 959 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 GRIP1Q9Y3R0 1128 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 PCNX3Q9H6A9 2034 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 DNAH6Q9C0G6 4158 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 hCG_1818297A0A087WSY0 165 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 A0A087X0T9 212 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 A0A0J9YW62 118 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 A0A1W2PR80 420 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 BTNL10A8MVZ5 291 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 PSMD12O00232 456 aaPredicted RBP3.19□□□□□ -1.9
VPS13B-208ENST00000521037 NDUFAB1O14561 156 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 TSPAN2O60636 221 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 CST8O60676 142 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 ANXA9O76027 345 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 CCDC172P0C7W6 258 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 FAM228BP0C875 321 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 NAGAP17050 411 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 CD22P20273 847 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 PCMT1P22061 227 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 AHCYP23526 432 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 TNFSF8P32971 234 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 ASMTP46597 345 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 MARCKSL1P49006 195 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 CAMLGP49069 296 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 PPOXP50336 477 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 ZNF83P51522 516 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 IDH3GP51553 393 aaPredicted RBP3.19□□□□□ -1.9
VPS13B-208ENST00000521037 RAG2P55895 527 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 KCNJ10P78508 379 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 LRRC74AQ0VAA2 488 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 MAD2L1Q13257 205 aaPredicted RBP3.19□□□□□ -1.9
VPS13B-208ENST00000521037 CUL1Q13616 776 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 SERTAD2Q14140 314 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 MELKQ14680 651 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 C18orf63Q68DL7 685 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 NIPAL1Q6NVV3 410 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 C16orf87Q6PH81 154 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 SCIMPQ6UWF3 145 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 Q6ZT83 130 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 CENPUQ71F23 418 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 MEPCEQ7L2J0 689 aaKnown RBP3.19□□□□□ -1.9
VPS13B-208ENST00000521037 PIWIL4Q7Z3Z4 852 aaKnown RBP3.19□□□□□ -1.9
VPS13B-208ENST00000521037 C17orf64Q86WR6 236 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 MAP7D3Q8IWC1 876 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 KLHDC8AQ8IYD2 350 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 KDM8Q8N371 416 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 BPIFB2Q8N4F0 458 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 RAB42Q8N4Z0 105 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 ZNF433Q8N7K0 673 aaPredicted RBP3.19□□□□□ -1.9
VPS13B-208ENST00000521037 TEX45Q8NA69 505 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 BBOF1Q8ND07 529 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 C17orf47Q8NEP4 570 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 SPATA4Q8NEY3 305 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 OR10D3Q8NH80 312 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 MUC7Q8TAX7 377 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 CD200R1Q8TD46 325 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 NSMAFQ92636 917 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 TMEM18Q96B42 140 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 MOB3AQ96BX8 217 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 LRRC45Q96CN5 670 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 FBXO17Q96EF6 278 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 SNF8Q96H20 258 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 VPS39Q96JC1 886 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 CPNE1Q99829 537 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 SRXN1Q9BYN0 137 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 OSBPL8Q9BZF1 889 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 PRSS22Q9GZN4 317 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 NPFFR1Q9GZQ6 430 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 DDX47Q9H0S4 455 aaKnown RBP3.19□□□□□ -1.9
VPS13B-208ENST00000521037 SRD5A3Q9H8P0 318 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 NHEJ1Q9H9Q4 299 aaPredicted RBP3.19□□□□□ -1.9
VPS13B-208ENST00000521037 CXorf21Q9HAI6 301 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 FLRT3Q9NZU0 649 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 EXTL2Q9UBQ6 330 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 LCMT1Q9UIC8 334 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 ZNF639Q9UID6 485 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 TRMT6Q9UJA5 497 aaKnown RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms