RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 IKZF1Q13422 519 aa11.69□□□□□ -0.54
TRAPPC9-208ENST00000520857 GUCA2BQ16661 112 aa11.69□□□□□ -0.54
TRAPPC9-208ENST00000520857 TMEM52BQ4KMG9 183 aa11.69□□□□□ -0.54
TRAPPC9-208ENST00000520857 MANEAQ5SRI9 462 aa11.69□□□□□ -0.54
TRAPPC9-208ENST00000520857 C3orf33Q6P1S2 294 aa11.69□□□□□ -0.54
TRAPPC9-208ENST00000520857 TMEM71Q6P5X7 295 aa11.69□□□□□ -0.54
TRAPPC9-208ENST00000520857 OR10R2Q8NGX6 335 aa11.69□□□□□ -0.54
TRAPPC9-208ENST00000520857 CMTM3Q96MX0 182 aa11.69□□□□□ -0.54
TRAPPC9-208ENST00000520857 MENTQ9BUN1 341 aa11.69□□□□□ -0.54
TRAPPC9-208ENST00000520857 CGGBP1Q9UFW8 167 aaPredicted RBP11.69□□□□□ -0.54
TRAPPC9-208ENST00000520857 A0A0B4J2A0 478 aa11.69□□□□□ -0.54
TRAPPC9-208ENST00000520857 SRPX2O60687 465 aaPredicted RBP11.69□□□□□ -0.54
TRAPPC9-208ENST00000520857 RNGTTO60942 597 aaKnown RBP11.69□□□□□ -0.54
TRAPPC9-208ENST00000520857 SPARCP09486 303 aa11.69□□□□□ -0.54
TRAPPC9-208ENST00000520857 RPA2P15927 270 aa11.69□□□□□ -0.54
TRAPPC9-208ENST00000520857 RBM34P42696 430 aaKnown RBP11.69□□□□□ -0.54
TRAPPC9-208ENST00000520857 TAS2R19P59542 299 aa11.69□□□□□ -0.54
TRAPPC9-208ENST00000520857 C2orf76Q3KRA6 126 aa11.69□□□□□ -0.54
TRAPPC9-208ENST00000520857 ALG10Q5BKT4 473 aa11.69□□□□□ -0.54
TRAPPC9-208ENST00000520857 RNASE10Q5GAN6 216 aaKnown RBP11.69□□□□□ -0.54
TRAPPC9-208ENST00000520857 LRRTM1Q86UE6 522 aa11.69□□□□□ -0.54
TRAPPC9-208ENST00000520857 PHOSPHO1Q8TCT1 267 aa11.69□□□□□ -0.54
TRAPPC9-208ENST00000520857 RGP1Q92546 391 aaPredicted RBP11.69□□□□□ -0.54
TRAPPC9-208ENST00000520857 COX14Q96I36 57 aa11.69□□□□□ -0.54
TRAPPC9-208ENST00000520857 MYADMQ96S97 322 aa11.69□□□□□ -0.54
TRAPPC9-208ENST00000520857 ZBP1Q9H171 429 aa11.69□□□□□ -0.54
TRAPPC9-208ENST00000520857 HRH4Q9H3N8 390 aa11.69□□□□□ -0.54
TRAPPC9-208ENST00000520857 PIGMQ9H3S5 423 aa11.69□□□□□ -0.54
TRAPPC9-208ENST00000520857 SHPKQ9UHJ6 478 aa11.69□□□□□ -0.54
TRAPPC9-208ENST00000520857 PURGQ9UJV8 347 aaKnown RBP11.69□□□□□ -0.54
TRAPPC9-208ENST00000520857 HTTP42858 3142 aa11.69□□□□□ -0.54
TRAPPC9-208ENST00000520857 ZNF749O43361 778 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 SLC25A12O75746 678 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 PMS2P2O95744 297 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 GPR75O95800 540 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 RENP00797 406 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 NAT2P11245 290 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 IL13RA1P78552 427 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 DHODHQ02127 395 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 EIF2B1Q14232 305 aaKnown RBP11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 DEFB110Q30KQ9 67 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 DPY19L2P2Q6ZN68 376 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 CRIPAKQ8N1N5 446 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 DCUN1D4Q92564 292 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 CMSS1Q9BQ75 279 aaKnown RBP11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 CRB3Q9BUF7 120 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 RNF208Q9H0X6 261 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 CHRNA9Q9UGM1 479 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 ENTPD2Q9Y5L3 495 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 A0A1W2PQU0 124 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 P2RX6O15547 441 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 SGCEO43556 437 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 CT62P0C5K7 136 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 CTNNB1P35222 781 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 SEC13P55735 322 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 GPR85P60893 370 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 FIGLAQ6QHK4 219 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 MCATQ8IVS2 390 aaKnown RBP11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 PUSL1Q8N0Z8 303 aaKnown RBP11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 ACBD4Q8NC06 268 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 FAM46BQ96A09 425 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 WBP1Q96G27 269 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 FRRS1LQ9P0K9 344 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 ZNF337Q9Y3M9 751 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 DOCK9Q9BZ29 2069 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 CTAG2O75638 210 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 CSF2RAP15509 400 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 RORAP35398 523 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 GNALP38405 381 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 LSSP48449 732 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 ATP1B3P54709 279 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 SPOCK1Q08629 439 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 PAN3Q58A45 887 aaKnown RBP11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 NPEPL1Q8NDH3 523 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 OR4S1Q8NGB4 309 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 OR1J4Q8NGS1 313 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 TMED6Q8WW62 240 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 ARL11Q969Q4 196 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 RAB7BQ96AH8 199 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 CCDC74AQ96AQ1 378 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 C10orf90Q96M02 699 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 LRRC3BQ96PB8 259 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 RSPH9Q9H1X1 276 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 SYT4Q9H2B2 425 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 TMEM74BQ9NUR3 256 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 RASL12Q9NYN1 266 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 DHDHQ9UQ10 334 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 SLC22A13Q9Y226 551 aa11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 MRPS2Q9Y399 296 aaKnown RBP11.68□□□□□ -0.54
TRAPPC9-208ENST00000520857 TMEM272A0A1B0GTI8 110 aa11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 PRSS44E7EML9 344 aa11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 BRINP1O60477 761 aa11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 RDH16O75452 317 aa11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 AK1P00568 194 aa11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 CISD3P0C7P0 127 aa11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 AVPR2P30518 371 aa11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 CDKN2AP42771 156 aaKnown RBP11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 SRSF5Q13243 272 aaKnown RBP11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 SMCO1Q147U7 214 aa11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 GLYATL3Q5SZD4 288 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms