RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 EME1Q96AY2 570 aa15.33■□□□□ 0.04
TRAM1-203ENST00000520700 DDOQ99489 341 aa15.33■□□□□ 0.04
TRAM1-203ENST00000520700 RNPEPL1Q9HAU8 725 aa15.33■□□□□ 0.04
TRAM1-203ENST00000520700 SLC25A19Q9HC21 320 aa15.33■□□□□ 0.04
TRAM1-203ENST00000520700 SLC22A23A1A5C7 686 aa15.32■□□□□ 0.04
TRAM1-203ENST00000520700 H3BN98 237 aa15.32■□□□□ 0.04
TRAM1-203ENST00000520700 M0R3G1 203 aa15.32■□□□□ 0.04
TRAM1-203ENST00000520700 EI24O14681 340 aa15.32■□□□□ 0.04
TRAM1-203ENST00000520700 ARHGEF9O43307 516 aa15.32■□□□□ 0.04
TRAM1-203ENST00000520700 DHHO43323 396 aa15.32■□□□□ 0.04
TRAM1-203ENST00000520700 SOX14O95416 240 aa15.32■□□□□ 0.04
TRAM1-203ENST00000520700 HMGN1P05114 100 aa15.32■□□□□ 0.04
TRAM1-203ENST00000520700 ITGA5P08648 1049 aa15.32■□□□□ 0.04
TRAM1-203ENST00000520700 HOXB1P14653 301 aaPredicted RBP15.32■□□□□ 0.04
TRAM1-203ENST00000520700 PPP3CBP16298 524 aa15.32■□□□□ 0.04
TRAM1-203ENST00000520700 CLRN1P58418 232 aa15.32■□□□□ 0.04
TRAM1-203ENST00000520700 ROR2Q01974 943 aaKnown RBP15.32■□□□□ 0.04
TRAM1-203ENST00000520700 SLC34A1Q06495 639 aa15.32■□□□□ 0.04
TRAM1-203ENST00000520700 LGALS3BPQ08380 585 aa15.32■□□□□ 0.04
TRAM1-203ENST00000520700 TOP3AQ13472 1001 aaPredicted RBP15.32■□□□□ 0.04
TRAM1-203ENST00000520700 GINS1Q14691 196 aa15.32■□□□□ 0.04
TRAM1-203ENST00000520700 NRN1LQ496H8 165 aa15.32■□□□□ 0.04
TRAM1-203ENST00000520700 CLEC12AQ5QGZ9 265 aa15.32■□□□□ 0.04
TRAM1-203ENST00000520700 CARD17Q5XLA6 110 aa15.32■□□□□ 0.04
TRAM1-203ENST00000520700 SLC25A47Q6Q0C1 308 aa15.32■□□□□ 0.04
TRAM1-203ENST00000520700 SSX8Q7RTT4 187 aa15.32■□□□□ 0.04
TRAM1-203ENST00000520700 P2RY8Q86VZ1 359 aa15.32■□□□□ 0.04
TRAM1-203ENST00000520700 PACRGLQ8N7B6 248 aa15.32■□□□□ 0.04
TRAM1-203ENST00000520700 OR4Q3Q8NH05 313 aa15.32■□□□□ 0.04
TRAM1-203ENST00000520700 MCHR2Q969V1 340 aa15.32■□□□□ 0.04
TRAM1-203ENST00000520700 SLC29A1Q99808 456 aa15.32■□□□□ 0.04
TRAM1-203ENST00000520700 GABARAPL3Q9BY60 117 aa15.32■□□□□ 0.04
TRAM1-203ENST00000520700 ULBP2Q9BZM5 246 aa15.32■□□□□ 0.04
TRAM1-203ENST00000520700 CRLF2Q9HC73 371 aa15.32■□□□□ 0.04
TRAM1-203ENST00000520700 USP9YO00507 2555 aaPredicted RBP15.31■□□□□ 0.04
TRAM1-203ENST00000520700 SPTAN1Q13813 2472 aaKnown RBP15.31■□□□□ 0.04
TRAM1-203ENST00000520700 E9PQ18 207 aa15.31■□□□□ 0.04
TRAM1-203ENST00000520700 SOCS2O14508 198 aa15.31■□□□□ 0.04
TRAM1-203ENST00000520700 MITFO75030 526 aaPredicted RBP15.31■□□□□ 0.04
TRAM1-203ENST00000520700 CLDN1O95832 211 aa15.31■□□□□ 0.04
TRAM1-203ENST00000520700 QDPRP09417 244 aa15.31■□□□□ 0.04
TRAM1-203ENST00000520700 HIST1H1CP16403 213 aaKnown RBP15.31■□□□□ 0.04
TRAM1-203ENST00000520700 CDH2P19022 906 aaPredicted RBP15.31■□□□□ 0.04
TRAM1-203ENST00000520700 NOS3P29474 1203 aa15.31■□□□□ 0.04
TRAM1-203ENST00000520700 CDKN2AP42771 156 aaKnown RBP15.31■□□□□ 0.04
TRAM1-203ENST00000520700 RAD23AP54725 363 aa15.31■□□□□ 0.04
TRAM1-203ENST00000520700 FOXG1P55316 489 aaPredicted RBP15.31■□□□□ 0.04
TRAM1-203ENST00000520700 MYBPC1Q00872 1141 aa15.31■□□□□ 0.04
TRAM1-203ENST00000520700 PTGES3Q15185 160 aaKnown RBP15.31■□□□□ 0.04
TRAM1-203ENST00000520700 GABRA6Q16445 453 aa15.31■□□□□ 0.04
TRAM1-203ENST00000520700 PGGHGQ32M88 737 aa15.31■□□□□ 0.04
TRAM1-203ENST00000520700 PTCHD4Q6ZW05 846 aa15.31■□□□□ 0.04
TRAM1-203ENST00000520700 C17orf78Q8N4C9 275 aa15.31■□□□□ 0.04
TRAM1-203ENST00000520700 KISS1RQ969F8 398 aaPredicted RBP15.31■□□□□ 0.04
TRAM1-203ENST00000520700 RASD2Q96D21 266 aa15.31■□□□□ 0.04
TRAM1-203ENST00000520700 SPOCK3Q9BQ16 436 aa15.31■□□□□ 0.04
TRAM1-203ENST00000520700 SLC24A3Q9HC58 644 aa15.31■□□□□ 0.04
TRAM1-203ENST00000520700 CMC2Q9NRP2 79 aa15.31■□□□□ 0.04
TRAM1-203ENST00000520700 KLHL21Q9UJP4 597 aa15.31■□□□□ 0.04
TRAM1-203ENST00000520700 ZNF99A8MXY4 864 aaPredicted RBP15.3■□□□□ 0.04
TRAM1-203ENST00000520700 PAX7P23759 505 aa15.3■□□□□ 0.04
TRAM1-203ENST00000520700 POU1F1P28069 291 aa15.3■□□□□ 0.04
TRAM1-203ENST00000520700 GRNP28799 593 aaKnown RBP15.3■□□□□ 0.04
TRAM1-203ENST00000520700 HCFC1P51610 2035 aa15.3■□□□□ 0.04
TRAM1-203ENST00000520700 NPRL3Q12980 569 aa15.3■□□□□ 0.04
TRAM1-203ENST00000520700 TRIP10Q15642 601 aa15.3■□□□□ 0.04
TRAM1-203ENST00000520700 CEACAM16Q2WEN9 425 aa15.3■□□□□ 0.04
TRAM1-203ENST00000520700 OGFRL1Q5TC84 451 aaPredicted RBP15.3■□□□□ 0.04
TRAM1-203ENST00000520700 ACSM5Q6NUN0 579 aa15.3■□□□□ 0.04
TRAM1-203ENST00000520700 ANKRD16Q6P6B7 361 aa15.3■□□□□ 0.04
TRAM1-203ENST00000520700 FOXL2NBQ6ZUU3 175 aa15.3■□□□□ 0.04
TRAM1-203ENST00000520700 BHLHA15Q7RTS1 189 aaPredicted RBP15.3■□□□□ 0.04
TRAM1-203ENST00000520700 SYT14Q8NB59 555 aa15.3■□□□□ 0.04
TRAM1-203ENST00000520700 NPEPL1Q8NDH3 523 aa15.3■□□□□ 0.04
TRAM1-203ENST00000520700 BCL2L2Q92843 193 aaPredicted RBP15.3■□□□□ 0.04
TRAM1-203ENST00000520700 ZNF837Q96EG3 531 aaPredicted RBP15.3■□□□□ 0.04
TRAM1-203ENST00000520700 RDH12Q96NR8 316 aa15.3■□□□□ 0.04
TRAM1-203ENST00000520700 ALKBH3Q96Q83 286 aaPredicted RBP15.3■□□□□ 0.04
TRAM1-203ENST00000520700 TEX12Q9BXU0 123 aa15.3■□□□□ 0.04
TRAM1-203ENST00000520700 NKX1-2Q9UD57 310 aaPredicted RBP15.3■□□□□ 0.04
TRAM1-203ENST00000520700 RRP15Q9Y3B9 282 aaKnown RBP15.3■□□□□ 0.04
TRAM1-203ENST00000520700 ZAR1LA6NP61 321 aa15.29■□□□□ 0.04
TRAM1-203ENST00000520700 CCKARP32238 428 aa15.29■□□□□ 0.04
TRAM1-203ENST00000520700 ARF1P84077 181 aaKnown RBP15.29■□□□□ 0.04
TRAM1-203ENST00000520700 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.29■□□□□ 0.04
TRAM1-203ENST00000520700 TIMM23BQ5SRD1 257 aa15.29■□□□□ 0.04
TRAM1-203ENST00000520700 SLX4IPQ5VYV7 408 aa15.29■□□□□ 0.04
TRAM1-203ENST00000520700 JAZF1Q86VZ6 243 aa15.29■□□□□ 0.04
TRAM1-203ENST00000520700 DMRTC2Q8IXT2 367 aaPredicted RBP15.29■□□□□ 0.04
TRAM1-203ENST00000520700 CCDC36Q8IYA8 594 aa15.29■□□□□ 0.04
TRAM1-203ENST00000520700 OR52E2Q8NGJ4 325 aa15.29■□□□□ 0.04
TRAM1-203ENST00000520700 OR1K1Q8NGR3 316 aa15.29■□□□□ 0.04
TRAM1-203ENST00000520700 OR4K13Q8NH42 304 aa15.29■□□□□ 0.04
TRAM1-203ENST00000520700 HSD17B8Q92506 261 aa15.29■□□□□ 0.04
TRAM1-203ENST00000520700 OBP2BQ9NPH6 170 aa15.29■□□□□ 0.04
TRAM1-203ENST00000520700 NDRG3Q9UGV2 375 aa15.29■□□□□ 0.04
TRAM1-203ENST00000520700 ORC6Q9Y5N6 252 aa15.29■□□□□ 0.04
TRAM1-203ENST00000520700 COL12A1Q99715 3063 aa15.28■□□□□ 0.04
TRAM1-203ENST00000520700 CIB4A0PJX0 185 aa15.28■□□□□ 0.04
TRAM1-203ENST00000520700 OR5H1A6NKK0 313 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms