RNA–Protein interactions for RNA: ENST00000520600.1

CHRNA2-205, Transcript of cholinergic receptor nicotinic alpha 2 subunit, humanhuman

TSL 1 (best)

Gene CHRNA2, Length 1,468 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA2-205ENST00000520600 TRAPPC4Q9Y296 219 aa12.53□□□□□ -0.4
CHRNA2-205ENST00000520600 NOSIPQ9Y314 301 aaKnown RBP12.53□□□□□ -0.4
CHRNA2-205ENST00000520600 NIPBLQ6KC79 2804 aaeCLIP12.53□□□□□ -0.4
CHRNA2-205ENST00000520600 ZNF716A6NP11 495 aa12.53□□□□□ -0.4
CHRNA2-205ENST00000520600 GPR171O14626 319 aa12.53□□□□□ -0.4
CHRNA2-205ENST00000520600 HS3ST1O14792 307 aa12.53□□□□□ -0.4
CHRNA2-205ENST00000520600 OR7A10O76100 309 aa12.53□□□□□ -0.4
CHRNA2-205ENST00000520600 AHSA1O95433 338 aa12.53□□□□□ -0.4
CHRNA2-205ENST00000520600 CNOT4O95628 575 aaKnown RBP12.53□□□□□ -0.4
CHRNA2-205ENST00000520600 CLIC3O95833 236 aa12.53□□□□□ -0.4
CHRNA2-205ENST00000520600 IGHV3-9P01782 118 aa12.53□□□□□ -0.4
CHRNA2-205ENST00000520600 FOSL1P15407 271 aa12.53□□□□□ -0.4
CHRNA2-205ENST00000520600 FUT1P19526 365 aa12.53□□□□□ -0.4
CHRNA2-205ENST00000520600 PRPS1P60891 318 aa12.53□□□□□ -0.4
CHRNA2-205ENST00000520600 SLC35A1P78382 337 aa12.53□□□□□ -0.4
CHRNA2-205ENST00000520600 TEKQ02763 1124 aa12.53□□□□□ -0.4
CHRNA2-205ENST00000520600 STK11Q15831 433 aa12.53□□□□□ -0.4
CHRNA2-205ENST00000520600 ZBED5Q49AG3 693 aa12.53□□□□□ -0.4
CHRNA2-205ENST00000520600 RBM48Q5RL73 367 aaKnown RBP12.53□□□□□ -0.4
CHRNA2-205ENST00000520600 SLX4IPQ5VYV7 408 aa12.53□□□□□ -0.4
CHRNA2-205ENST00000520600 SMARCD3Q6STE5 483 aa12.53□□□□□ -0.4
CHRNA2-205ENST00000520600 UGT2A3Q6UWM9 527 aa12.53□□□□□ -0.4
CHRNA2-205ENST00000520600 ZNF620Q6ZNG0 422 aa12.53□□□□□ -0.4
CHRNA2-205ENST00000520600 CCDC103Q8IW40 242 aa12.53□□□□□ -0.4
CHRNA2-205ENST00000520600 UBE2J2Q8N2K1 259 aa12.53□□□□□ -0.4
CHRNA2-205ENST00000520600 OR2T33Q8NG76 320 aa12.53□□□□□ -0.4
CHRNA2-205ENST00000520600 FAM81AQ8TBF8 368 aa12.53□□□□□ -0.4
CHRNA2-205ENST00000520600 APH1AQ96BI3 265 aa12.53□□□□□ -0.4
CHRNA2-205ENST00000520600 PERPQ96FX8 193 aa12.53□□□□□ -0.4
CHRNA2-205ENST00000520600 Q96MT0 163 aa12.53□□□□□ -0.4
CHRNA2-205ENST00000520600 ESRP2Q9H6T0 727 aaKnown RBP12.53□□□□□ -0.4
CHRNA2-205ENST00000520600 SLC25A19Q9HC21 320 aa12.53□□□□□ -0.4
CHRNA2-205ENST00000520600 NANSQ9NR45 359 aa12.53□□□□□ -0.4
CHRNA2-205ENST00000520600 C20orf141Q9NUB4 165 aa12.53□□□□□ -0.4
CHRNA2-205ENST00000520600 UBAP1Q9NZ09 502 aa12.53□□□□□ -0.4
CHRNA2-205ENST00000520600 NAV3Q8IVL0 2385 aa12.52□□□□□ -0.4
CHRNA2-205ENST00000520600 PLCE1Q9P212 2302 aa12.52□□□□□ -0.41
CHRNA2-205ENST00000520600 ZC3H12DA2A288 527 aaKnown RBP12.52□□□□□ -0.41
CHRNA2-205ENST00000520600 SNTNA6NMZ2 147 aa12.52□□□□□ -0.41
CHRNA2-205ENST00000520600 E9PQ18 207 aa12.52□□□□□ -0.41
CHRNA2-205ENST00000520600 M0R3G1 203 aa12.52□□□□□ -0.41
CHRNA2-205ENST00000520600 EIF1BO60739 113 aaKnown RBP12.52□□□□□ -0.41
CHRNA2-205ENST00000520600 RAMP1O60894 148 aa12.52□□□□□ -0.41
CHRNA2-205ENST00000520600 SOX14O95416 240 aa12.52□□□□□ -0.41
CHRNA2-205ENST00000520600 CD3EP07766 207 aa12.52□□□□□ -0.41
CHRNA2-205ENST00000520600 IMPDH2P12268 514 aa12.52□□□□□ -0.41
CHRNA2-205ENST00000520600 COX5AP20674 150 aa12.52□□□□□ -0.41
CHRNA2-205ENST00000520600 MAKP20794 623 aa12.52□□□□□ -0.41
CHRNA2-205ENST00000520600 IGHV1-2P23083 117 aa12.52□□□□□ -0.41
CHRNA2-205ENST00000520600 SLC6A6P31641 620 aa12.52□□□□□ -0.41
CHRNA2-205ENST00000520600 SLC16A1P53985 500 aa12.52□□□□□ -0.41
CHRNA2-205ENST00000520600 CXCR4P61073 352 aa12.52□□□□□ -0.41
CHRNA2-205ENST00000520600 ISL1P61371 349 aa12.52□□□□□ -0.41
CHRNA2-205ENST00000520600 LSM11P83369 360 aaKnown RBP eCLIP12.52□□□□□ -0.41
CHRNA2-205ENST00000520600 CDK5Q00535 292 aa12.52□□□□□ -0.41
CHRNA2-205ENST00000520600 GINS1Q14691 196 aa12.52□□□□□ -0.41
CHRNA2-205ENST00000520600 FAM69AQ5T7M9 428 aa12.52□□□□□ -0.41
CHRNA2-205ENST00000520600 ZNF786Q8N393 782 aa12.52□□□□□ -0.41
CHRNA2-205ENST00000520600 OR8J1Q8NGP2 316 aa12.52□□□□□ -0.41
CHRNA2-205ENST00000520600 FANK1Q8TC84 345 aa12.52□□□□□ -0.41
CHRNA2-205ENST00000520600 AKAP1Q92667 903 aaKnown RBP eCLIP12.52□□□□□ -0.41
CHRNA2-205ENST00000520600 HDAC2Q92769 488 aaKnown RBP12.52□□□□□ -0.41
CHRNA2-205ENST00000520600 PLEKHA8Q96JA3 519 aa12.52□□□□□ -0.41
CHRNA2-205ENST00000520600 GPA33Q99795 319 aa12.52□□□□□ -0.41
CHRNA2-205ENST00000520600 NAA11Q9BSU3 229 aaPredicted RBP12.52□□□□□ -0.41
CHRNA2-205ENST00000520600 TSSK6Q9BXA6 273 aa12.52□□□□□ -0.41
CHRNA2-205ENST00000520600 FKRPQ9H9S5 495 aa12.52□□□□□ -0.41
CHRNA2-205ENST00000520600 SCN3BQ9NY72 215 aa12.52□□□□□ -0.41
CHRNA2-205ENST00000520600 SCOCQ9UIL1 159 aa12.52□□□□□ -0.41
CHRNA2-205ENST00000520600 ZNF229Q9UJW7 825 aa12.52□□□□□ -0.41
CHRNA2-205ENST00000520600 RNF115Q9Y4L5 304 aa12.52□□□□□ -0.41
CHRNA2-205ENST00000520600 IGKV1D-42A0A075B6H8 117 aa12.51□□□□□ -0.41
CHRNA2-205ENST00000520600 MRPL33O75394 65 aaKnown RBP12.51□□□□□ -0.41
CHRNA2-205ENST00000520600 CH25HO95992 272 aa12.51□□□□□ -0.41
CHRNA2-205ENST00000520600 LYNP07948 512 aa12.51□□□□□ -0.41
CHRNA2-205ENST00000520600 EPHA2P29317 976 aa12.51□□□□□ -0.41
CHRNA2-205ENST00000520600 IDUAP35475 653 aa12.51□□□□□ -0.41
CHRNA2-205ENST00000520600 H3F3AP84243 136 aa12.51□□□□□ -0.41
CHRNA2-205ENST00000520600 PPA1Q15181 289 aa12.51□□□□□ -0.41
CHRNA2-205ENST00000520600 ZNF74Q16587 644 aa12.51□□□□□ -0.41
CHRNA2-205ENST00000520600 NCMAPQ5T1S8 102 aa12.51□□□□□ -0.41
CHRNA2-205ENST00000520600 C1orf140Q5VVS0 124 aa12.51□□□□□ -0.41
CHRNA2-205ENST00000520600 FBXW9Q5XUX1 488 aa12.51□□□□□ -0.41
CHRNA2-205ENST00000520600 PTCHD4Q6ZW05 846 aa12.51□□□□□ -0.41
CHRNA2-205ENST00000520600 ZNF433Q8N7K0 673 aaPredicted RBP12.51□□□□□ -0.41
CHRNA2-205ENST00000520600 TMEM171Q8WVE6 324 aa12.51□□□□□ -0.41
CHRNA2-205ENST00000520600 MUCL1Q96DR8 90 aa12.51□□□□□ -0.41
CHRNA2-205ENST00000520600 TAPBPLQ9BX59 468 aa12.51□□□□□ -0.41
CHRNA2-205ENST00000520600 OR52D1Q9H346 318 aa12.51□□□□□ -0.41
CHRNA2-205ENST00000520600 GSX1Q9H4S2 264 aaPredicted RBP12.51□□□□□ -0.41
CHRNA2-205ENST00000520600 CLN6Q9NWW5 311 aa12.51□□□□□ -0.41
CHRNA2-205ENST00000520600 SIGLEC7Q9Y286 467 aa12.51□□□□□ -0.41
CHRNA2-205ENST00000520600 TLN2Q9Y4G6 2542 aa12.51□□□□□ -0.41
CHRNA2-205ENST00000520600 CDC42EP2O14613 210 aa12.5□□□□□ -0.41
CHRNA2-205ENST00000520600 PTP4A3O75365 173 aa12.5□□□□□ -0.41
CHRNA2-205ENST00000520600 RAD51DO75771 328 aa12.5□□□□□ -0.41
CHRNA2-205ENST00000520600 NDUFB2O95178 105 aa12.5□□□□□ -0.41
CHRNA2-205ENST00000520600 TP53P04637 393 aaPredicted RBP12.5□□□□□ -0.41
CHRNA2-205ENST00000520600 GTF2E2P29084 291 aaKnown RBP12.5□□□□□ -0.41
CHRNA2-205ENST00000520600 NTF4P34130 210 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms