RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-222ENST00000520400 FTMTQ8N4E7 242 aa2.99□□□□□ -1.93
CTNNA1-222ENST00000520400 RNF138Q8WVD3 245 aa2.99□□□□□ -1.93
CTNNA1-222ENST00000520400 DNAJA4Q8WW22 397 aaPredicted RBP2.99□□□□□ -1.93
CTNNA1-222ENST00000520400 HTR3CQ8WXA8 447 aa2.99□□□□□ -1.93
CTNNA1-222ENST00000520400 ARPC1AQ92747 370 aa2.99□□□□□ -1.93
CTNNA1-222ENST00000520400 UBE2E3Q969T4 207 aa2.99□□□□□ -1.93
CTNNA1-222ENST00000520400 ZNF414Q96IQ9 312 aa2.99□□□□□ -1.93
CTNNA1-222ENST00000520400 PARD6BQ9BYG5 372 aa2.99□□□□□ -1.93
CTNNA1-222ENST00000520400 CHMP4BQ9H444 224 aaKnown RBP2.99□□□□□ -1.93
CTNNA1-222ENST00000520400 RBKSQ9H477 322 aa2.99□□□□□ -1.93
CTNNA1-222ENST00000520400 NARFLQ9H6Q4 476 aa2.99□□□□□ -1.93
CTNNA1-222ENST00000520400 CD209Q9NNX6 404 aa2.99□□□□□ -1.93
CTNNA1-222ENST00000520400 THUMPD1Q9NXG2 353 aaKnown RBP2.99□□□□□ -1.93
CTNNA1-222ENST00000520400 CDH9Q9ULB4 789 aa2.99□□□□□ -1.93
CTNNA1-222ENST00000520400 BAZ2BQ9UIF8 2168 aaKnown RBP2.99□□□□□ -1.93
CTNNA1-222ENST00000520400 ZNF609O15014 1411 aa2.99□□□□□ -1.93
CTNNA1-222ENST00000520400 PTPRFP10586 1907 aa2.99□□□□□ -1.93
CTNNA1-222ENST00000520400 MED23Q9ULK4 1368 aa2.99□□□□□ -1.93
CTNNA1-222ENST00000520400 DNAH12Q6ZR08 3092 aa2.99□□□□□ -1.93
CTNNA1-222ENST00000520400 SIPA1L1O43166 1804 aa2.98□□□□□ -1.93
CTNNA1-222ENST00000520400 COL1A1P02452 1464 aaPredicted RBP2.98□□□□□ -1.93
CTNNA1-222ENST00000520400 A8MUA0 341 aa2.98□□□□□ -1.93
CTNNA1-222ENST00000520400 RIPK2O43353 540 aa2.98□□□□□ -1.93
CTNNA1-222ENST00000520400 TNFSF13O75888 250 aa2.98□□□□□ -1.93
CTNNA1-222ENST00000520400 CIAO1O76071 339 aa2.98□□□□□ -1.93
CTNNA1-222ENST00000520400 HTR1EP28566 365 aa2.98□□□□□ -1.93
CTNNA1-222ENST00000520400 GNA11P29992 359 aa2.98□□□□□ -1.93
CTNNA1-222ENST00000520400 PRPS1P60891 318 aa2.98□□□□□ -1.93
CTNNA1-222ENST00000520400 REG3AQ06141 175 aa2.98□□□□□ -1.93
CTNNA1-222ENST00000520400 ORC2Q13416 577 aaPredicted RBP2.98□□□□□ -1.93
CTNNA1-222ENST00000520400 UNC119Q13432 240 aa2.98□□□□□ -1.93
CTNNA1-222ENST00000520400 GPNMBQ14956 572 aa2.98□□□□□ -1.93
CTNNA1-222ENST00000520400 EXOC3L2Q2M3D2 409 aa2.98□□□□□ -1.93
CTNNA1-222ENST00000520400 CASC10Q5T4H9 136 aa2.98□□□□□ -1.93
CTNNA1-222ENST00000520400 C11orf71Q6IPW1 123 aa2.98□□□□□ -1.93
CTNNA1-222ENST00000520400 RNF165Q6ZSG1 346 aa2.98□□□□□ -1.93
CTNNA1-222ENST00000520400 LRRC75A-AS1Q8N1F1 130 aa2.98□□□□□ -1.93
CTNNA1-222ENST00000520400 ZNF433Q8N7K0 673 aaPredicted RBP2.98□□□□□ -1.93
CTNNA1-222ENST00000520400 ANKRD49Q8WVL7 239 aa2.98□□□□□ -1.93
CTNNA1-222ENST00000520400 FAM151AQ8WW52 585 aa2.98□□□□□ -1.93
CTNNA1-222ENST00000520400 EFHD2Q96C19 240 aaPredicted RBP2.98□□□□□ -1.93
CTNNA1-222ENST00000520400 C12orf42Q96LP6 360 aa2.98□□□□□ -1.93
CTNNA1-222ENST00000520400 NPY6RQ99463 290 aa2.98□□□□□ -1.93
CTNNA1-222ENST00000520400 NAT9Q9BTE0 207 aa2.98□□□□□ -1.93
CTNNA1-222ENST00000520400 BOLA2Q9H3K6 86 aa2.98□□□□□ -1.93
CTNNA1-222ENST00000520400 REEP4Q9H6H4 257 aa2.98□□□□□ -1.93
CTNNA1-222ENST00000520400 ASB3Q9Y575 518 aa2.98□□□□□ -1.93
CTNNA1-222ENST00000520400 PCM1Q15154 2024 aa2.98□□□□□ -1.93
CTNNA1-222ENST00000520400 RIF1Q5UIP0 2472 aaKnown RBP2.98□□□□□ -1.93
CTNNA1-222ENST00000520400 RPAP1Q9BWH6 1393 aaPredicted RBP2.98□□□□□ -1.93
CTNNA1-222ENST00000520400 COL11A1P12107 1806 aaPredicted RBP2.98□□□□□ -1.93
CTNNA1-222ENST00000520400 DOCK1Q14185 1865 aa2.97□□□□□ -1.93
CTNNA1-222ENST00000520400 CLRN2A0PK11 232 aa2.97□□□□□ -1.93
CTNNA1-222ENST00000520400 RBMY1BA6NDE4 496 aaKnown RBP2.97□□□□□ -1.93
CTNNA1-222ENST00000520400 RBMY1EA6NEQ0 496 aaKnown RBP2.97□□□□□ -1.93
CTNNA1-222ENST00000520400 RBMY1DP0C7P1 496 aaKnown RBP2.97□□□□□ -1.93
CTNNA1-222ENST00000520400 CHTF8P0CG12 524 aa2.97□□□□□ -1.93
CTNNA1-222ENST00000520400 RBMY1A1P0DJD3 496 aaKnown RBP2.97□□□□□ -1.93
CTNNA1-222ENST00000520400 RCC1P18754 421 aaPredicted RBP2.97□□□□□ -1.93
CTNNA1-222ENST00000520400 GABRR1P24046 479 aa2.97□□□□□ -1.93
CTNNA1-222ENST00000520400 COX7A1P24310 79 aa2.97□□□□□ -1.93
CTNNA1-222ENST00000520400 CCR1P32246 355 aa2.97□□□□□ -1.93
CTNNA1-222ENST00000520400 DRD3P35462 400 aa2.97□□□□□ -1.93
CTNNA1-222ENST00000520400 RPL13AP40429 203 aaKnown RBP2.97□□□□□ -1.93
CTNNA1-222ENST00000520400 OPRD1P41143 372 aa2.97□□□□□ -1.93
CTNNA1-222ENST00000520400 PKNOX1P55347 436 aa2.97□□□□□ -1.93
CTNNA1-222ENST00000520400 SEC61GP60059 68 aa2.97□□□□□ -1.93
CTNNA1-222ENST00000520400 SELENOTP62341 195 aa2.97□□□□□ -1.93
CTNNA1-222ENST00000520400 FGL1Q08830 312 aa2.97□□□□□ -1.93
CTNNA1-222ENST00000520400 RIPK1Q13546 671 aa2.97□□□□□ -1.93
CTNNA1-222ENST00000520400 MESDQ14696 234 aa2.97□□□□□ -1.93
CTNNA1-222ENST00000520400 OXA1LQ15070 435 aa2.97□□□□□ -1.93
CTNNA1-222ENST00000520400 Q6ZPB1 254 aaPredicted RBP2.97□□□□□ -1.93
CTNNA1-222ENST00000520400 ASCL5Q7RTU5 278 aa2.97□□□□□ -1.93
CTNNA1-222ENST00000520400 PIANPQ8IYJ0 282 aa2.97□□□□□ -1.93
CTNNA1-222ENST00000520400 PNKDQ8N490 385 aa2.97□□□□□ -1.93
CTNNA1-222ENST00000520400 EIF1ADQ8N9N8 165 aaKnown RBP2.97□□□□□ -1.93
CTNNA1-222ENST00000520400 OR9G1Q8NH87 305 aa2.97□□□□□ -1.93
CTNNA1-222ENST00000520400 MAGEE2Q8TD90 523 aaPredicted RBP2.97□□□□□ -1.93
CTNNA1-222ENST00000520400 UFD1Q92890 307 aa2.97□□□□□ -1.93
CTNNA1-222ENST00000520400 LRRC58Q96CX6 371 aa2.97□□□□□ -1.93
CTNNA1-222ENST00000520400 C10orf35Q96D05 121 aa2.97□□□□□ -1.93
CTNNA1-222ENST00000520400 KCNA7Q96RP8 456 aa2.97□□□□□ -1.93
CTNNA1-222ENST00000520400 POLR2J2Q9GZM3 115 aaKnown RBP2.97□□□□□ -1.93
CTNNA1-222ENST00000520400 COA1Q9GZY4 146 aa2.97□□□□□ -1.93
CTNNA1-222ENST00000520400 POLR2J3Q9H1A7 115 aaKnown RBP2.97□□□□□ -1.93
CTNNA1-222ENST00000520400 MMP26Q9NRE1 261 aa2.97□□□□□ -1.93
CTNNA1-222ENST00000520400 CLCF1Q9UBD9 225 aa2.97□□□□□ -1.93
CTNNA1-222ENST00000520400 SEC14L3Q9UDX4 400 aa2.97□□□□□ -1.93
CTNNA1-222ENST00000520400 MTRF1LQ9UGC7 380 aaKnown RBP2.97□□□□□ -1.93
CTNNA1-222ENST00000520400 BTNL2Q9UIR0 455 aa2.97□□□□□ -1.93
CTNNA1-222ENST00000520400 TP53TG5Q9Y2B4 290 aa2.97□□□□□ -1.93
CTNNA1-222ENST00000520400 PHIPQ8WWQ0 1821 aa2.97□□□□□ -1.93
CTNNA1-222ENST00000520400 MGAMO43451 1857 aa2.96□□□□□ -1.93
CTNNA1-222ENST00000520400 NUP214P35658 2090 aaPredicted RBP2.96□□□□□ -1.94
CTNNA1-222ENST00000520400 FBN3Q75N90 2809 aa2.96□□□□□ -1.94
CTNNA1-222ENST00000520400 A0A1B0GVL5 298 aa2.96□□□□□ -1.94
CTNNA1-222ENST00000520400 SNTNA6NMZ2 147 aa2.96□□□□□ -1.94
CTNNA1-222ENST00000520400 H0Y9J4 135 aa2.96□□□□□ -1.94
CTNNA1-222ENST00000520400 TIMM8AO60220 97 aaPredicted RBP2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms