RNA–Protein interactions for RNA: ENST00000518930.1

PCM1-209, Transcript of pericentriolar material 1, human

TSL 3

Gene PCM1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-209	ENST00000518930	MYBPC1	Q00872	1141 aa		21.34	■■□□□ 1.01
PCM1-209	ENST00000518930	DAG1	Q14118	895 aa		21.34	■■□□□ 1.01
PCM1-209	ENST00000518930	TSC22D1	Q15714	1073 aa		21.34	■■□□□ 1.01
PCM1-209	ENST00000518930	PGGHG	Q32M88	737 aa		21.34	■■□□□ 1.01
PCM1-209	ENST00000518930	SLC27A4	Q6P1M0	643 aa		21.34	■■□□□ 1.01
PCM1-209	ENST00000518930	PSMG3-AS1	Q96PY0	264 aa		21.34	■■□□□ 1.01
PCM1-209	ENST00000518930	RBP7	Q96R05	134 aa		21.34	■■□□□ 1.01
PCM1-209	ENST00000518930	TEX12	Q9BXU0	123 aa		21.34	■■□□□ 1.01
PCM1-209	ENST00000518930	ACTR6	Q9GZN1	396 aa		21.34	■■□□□ 1.01
PCM1-209	ENST00000518930	OR10A4	Q9H209	315 aa		21.34	■■□□□ 1.01
PCM1-209	ENST00000518930	AHCYL1	O43865	530 aa		21.33	■■□□□ 1.01
PCM1-209	ENST00000518930	HOXC12	P31275	282 aa		21.33	■■□□□ 1.01
PCM1-209	ENST00000518930	ZNF84	P51523	738 aa		21.33	■■□□□ 1.01
PCM1-209	ENST00000518930	FOXG1	P55316	489 aa	Predicted RBP	21.33	■■□□□ 1.01
PCM1-209	ENST00000518930	ESRRG	P62508	458 aa		21.33	■■□□□ 1.01
PCM1-209	ENST00000518930	TRIP10	Q15642	601 aa		21.33	■■□□□ 1.01
PCM1-209	ENST00000518930	STK11	Q15831	433 aa		21.33	■■□□□ 1.01
PCM1-209	ENST00000518930	HIST3H3	Q16695	136 aa		21.33	■■□□□ 1.01
PCM1-209	ENST00000518930	SLC35F1	Q5T1Q4	408 aa		21.33	■■□□□ 1.01
PCM1-209	ENST00000518930	OR7E24	Q6IFN5	339 aa		21.33	■■□□□ 1.01
PCM1-209	ENST00000518930	LNX2	Q8N448	690 aa		21.33	■■□□□ 1.01
PCM1-209	ENST00000518930	CBR4	Q8N4T8	237 aa		21.33	■■□□□ 1.01
PCM1-209	ENST00000518930	C1orf162	Q8NEQ5	155 aa	Predicted RBP	21.33	■■□□□ 1.01
PCM1-209	ENST00000518930	OR4Q3	Q8NH05	313 aa		21.33	■■□□□ 1.01
PCM1-209	ENST00000518930	MCHR2	Q969V1	340 aa		21.33	■■□□□ 1.01
PCM1-209	ENST00000518930	USB1	Q9BQ65	265 aa	Known RBP	21.33	■■□□□ 1.01
PCM1-209	ENST00000518930	NDRG3	Q9UGV2	375 aa		21.33	■■□□□ 1.01
PCM1-209	ENST00000518930	SPTAN1	Q13813	2472 aa	Known RBP	21.32	■■□□□ 1
PCM1-209	ENST00000518930	PRSS37	A4D1T9	235 aa		21.32	■■□□□ 1
PCM1-209	ENST00000518930	ZNF99	A8MXY4	864 aa	Predicted RBP	21.32	■■□□□ 1
PCM1-209	ENST00000518930	MITF	O75030	526 aa	Predicted RBP	21.32	■■□□□ 1
PCM1-209	ENST00000518930	REN	P00797	406 aa		21.32	■■□□□ 1
PCM1-209	ENST00000518930	PPP3CB	P16298	524 aa		21.32	■■□□□ 1
PCM1-209	ENST00000518930	HIST1H1C	P16403	213 aa	Known RBP	21.32	■■□□□ 1
PCM1-209	ENST00000518930	ALDH3A2	P51648	485 aa		21.32	■■□□□ 1
PCM1-209	ENST00000518930	THEM4	Q5T1C6	240 aa		21.32	■■□□□ 1
PCM1-209	ENST00000518930	LEG1	Q6P5S2	330 aa		21.32	■■□□□ 1
PCM1-209	ENST00000518930	MEX3B	Q6ZN04	569 aa	Known RBP	21.32	■■□□□ 1
PCM1-209	ENST00000518930	ZBTB49	Q6ZSB9	765 aa		21.32	■■□□□ 1
PCM1-209	ENST00000518930	IQCF1	Q8N6M8	205 aa		21.32	■■□□□ 1
PCM1-209	ENST00000518930	S100PBP	Q96BU1	408 aa		21.32	■■□□□ 1
PCM1-209	ENST00000518930	USE1	Q9NZ43	259 aa		21.32	■■□□□ 1
PCM1-209	ENST00000518930	TMEFF2	Q9UIK5	374 aa	Predicted RBP	21.32	■■□□□ 1
PCM1-209	ENST00000518930	DOPEY2	Q9Y3R5	2298 aa		21.32	■■□□□ 1
PCM1-209	ENST00000518930	SLC22A23	A1A5C7	686 aa		21.31	■■□□□ 1
PCM1-209	ENST00000518930	TUBAL3	A6NHL2	446 aa		21.31	■■□□□ 1
PCM1-209	ENST00000518930	DHH	O43323	396 aa		21.31	■■□□□ 1
PCM1-209	ENST00000518930	IFNG	P01579	166 aa		21.31	■■□□□ 1
PCM1-209	ENST00000518930	ALPL	P05186	524 aa		21.31	■■□□□ 1
PCM1-209	ENST00000518930	GRK5	P34947	590 aa		21.31	■■□□□ 1
PCM1-209	ENST00000518930	CRISP1	P54107	249 aa		21.31	■■□□□ 1
PCM1-209	ENST00000518930	FMOD	Q06828	376 aa		21.31	■■□□□ 1
PCM1-209	ENST00000518930	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	21.31	■■□□□ 1
PCM1-209	ENST00000518930	GINS1	Q14691	196 aa		21.31	■■□□□ 1
PCM1-209	ENST00000518930	LRFN4	Q6PJG9	635 aa		21.31	■■□□□ 1
PCM1-209	ENST00000518930	C17orf78	Q8N4C9	275 aa		21.31	■■□□□ 1
PCM1-209	ENST00000518930	SDR9C7	Q8NEX9	313 aa		21.31	■■□□□ 1
PCM1-209	ENST00000518930	OR52E2	Q8NGJ4	325 aa		21.31	■■□□□ 1
PCM1-209	ENST00000518930	OR1K1	Q8NGR3	316 aa		21.31	■■□□□ 1
PCM1-209	ENST00000518930	OR4K13	Q8NH42	304 aa		21.31	■■□□□ 1
PCM1-209	ENST00000518930	MED18	Q9BUE0	208 aa		21.31	■■□□□ 1
PCM1-209	ENST00000518930	SLC24A3	Q9HC58	644 aa		21.31	■■□□□ 1
PCM1-209	ENST00000518930	VSX1	Q9NZR4	365 aa	Predicted RBP	21.31	■■□□□ 1
PCM1-209	ENST00000518930	PLEKHB1	Q9UF11	243 aa	Predicted RBP	21.31	■■□□□ 1
PCM1-209	ENST00000518930	KLHL21	Q9UJP4	597 aa		21.31	■■□□□ 1
PCM1-209	ENST00000518930	ALPK2	Q86TB3	2170 aa		21.31	■■□□□ 1
PCM1-209	ENST00000518930	COL12A1	Q99715	3063 aa		21.31	■■□□□ 1
PCM1-209	ENST00000518930	RIIAD1	A6NNX1	92 aa		21.3	■■□□□ 1
PCM1-209	ENST00000518930	SLC2A10	O95528	541 aa		21.3	■■□□□ 1
PCM1-209	ENST00000518930	IGFBP2	P18065	325 aa		21.3	■■□□□ 1
PCM1-209	ENST00000518930	CDKN2A	P42771	156 aa	Known RBP	21.3	■■□□□ 1
PCM1-209	ENST00000518930	KIR2DL3	P43628	341 aa		21.3	■■□□□ 1
PCM1-209	ENST00000518930	RAD23A	P54725	363 aa		21.3	■■□□□ 1
PCM1-209	ENST00000518930	ARF1	P84077	181 aa	Known RBP	21.3	■■□□□ 1
PCM1-209	ENST00000518930	SNTB1	Q13884	538 aa	Known RBP	21.3	■■□□□ 1
PCM1-209	ENST00000518930	GABRA6	Q16445	453 aa		21.3	■■□□□ 1
PCM1-209	ENST00000518930	C10orf128	Q5T292	105 aa		21.3	■■□□□ 1
PCM1-209	ENST00000518930	ANKRD16	Q6P6B7	361 aa		21.3	■■□□□ 1
PCM1-209	ENST00000518930	DNM1P34	Q6PK57	102 aa		21.3	■■□□□ 1
PCM1-209	ENST00000518930	KLHL24	Q6TFL4	600 aa		21.3	■■□□□ 1
PCM1-209	ENST00000518930	PTCHD4	Q6ZW05	846 aa		21.3	■■□□□ 1
PCM1-209	ENST00000518930	DMRTC2	Q8IXT2	367 aa	Predicted RBP	21.3	■■□□□ 1
PCM1-209	ENST00000518930	NSMAF	Q92636	917 aa		21.3	■■□□□ 1
PCM1-209	ENST00000518930	ZNF837	Q96EG3	531 aa	Predicted RBP	21.3	■■□□□ 1
PCM1-209	ENST00000518930	SNX18	Q96RF0	628 aa		21.3	■■□□□ 1
PCM1-209	ENST00000518930	FOXB1	Q99853	325 aa		21.3	■■□□□ 1
PCM1-209	ENST00000518930	PRRG3	Q9BZD7	231 aa		21.3	■■□□□ 1
PCM1-209	ENST00000518930	SYT4	Q9H2B2	425 aa		21.3	■■□□□ 1
PCM1-209	ENST00000518930	RIBC2	Q9H4K1	309 aa		21.3	■■□□□ 1
PCM1-209	ENST00000518930	SLC25A19	Q9HC21	320 aa		21.3	■■□□□ 1
PCM1-209	ENST00000518930	USP9Y	O00507	2555 aa	Predicted RBP	21.3	■■□□□ 1
PCM1-209	ENST00000518930	SH3D21	A4FU49	640 aa		21.29	■■□□□ 1
PCM1-209	ENST00000518930	COX6B1	P14854	86 aa		21.29	■■□□□ 1
PCM1-209	ENST00000518930	ZNF3	P17036	446 aa		21.29	■■□□□ 1
PCM1-209	ENST00000518930	GIPR	P48546	466 aa		21.29	■■□□□ 1
PCM1-209	ENST00000518930	ZNF133	P52736	654 aa	Predicted RBP	21.29	■■□□□ 1
PCM1-209	ENST00000518930	ZNF813	Q6ZN06	617 aa		21.29	■■□□□ 1
PCM1-209	ENST00000518930	P2RY8	Q86VZ1	359 aa		21.29	■■□□□ 1
PCM1-209	ENST00000518930	NMD3	Q96D46	503 aa	Known RBP	21.29	■■□□□ 1
PCM1-209	ENST00000518930	NMNAT3	Q96T66	252 aa		21.29	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms