RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 CLPTM1LQ96KA5 538 aa11.55□□□□□ -0.56
VEGFA-219ENST00000518824 DHRS1Q96LJ7 313 aa11.55□□□□□ -0.56
VEGFA-219ENST00000518824 SEPHS2Q99611 448 aa11.55□□□□□ -0.56
VEGFA-219ENST00000518824 SH3GL3Q99963 347 aa11.55□□□□□ -0.56
VEGFA-219ENST00000518824 CXorf56Q9H5V9 222 aa11.55□□□□□ -0.56
VEGFA-219ENST00000518824 B3GAT2Q9NPZ5 323 aa11.55□□□□□ -0.56
VEGFA-219ENST00000518824 TMEM38BQ9NVV0 291 aa11.55□□□□□ -0.56
VEGFA-219ENST00000518824 MAGEL2Q9UJ55 1249 aa11.55□□□□□ -0.56
VEGFA-219ENST00000518824 ZNF346Q9UL40 294 aaKnown RBP11.55□□□□□ -0.56
VEGFA-219ENST00000518824 SAMD4AQ9UPU9 718 aaKnown RBP11.55□□□□□ -0.56
VEGFA-219ENST00000518824 ARFGEF3Q5TH69 2177 aa11.55□□□□□ -0.56
VEGFA-219ENST00000518824 IGHV2OR16-5A0A0B4J2B6 119 aa11.54□□□□□ -0.56
VEGFA-219ENST00000518824 MCIDASD6RGH6 385 aa11.54□□□□□ -0.56
VEGFA-219ENST00000518824 H7C1Q1 480 aa11.54□□□□□ -0.56
VEGFA-219ENST00000518824 IMPA2O14732 288 aa11.54□□□□□ -0.56
VEGFA-219ENST00000518824 ARHGEF9O43307 516 aa11.54□□□□□ -0.56
VEGFA-219ENST00000518824 IGHG1P01857 330 aa11.54□□□□□ -0.56
VEGFA-219ENST00000518824 HOXB1P14653 301 aaPredicted RBP11.54□□□□□ -0.56
VEGFA-219ENST00000518824 ZNF14P17017 642 aaPredicted RBP11.54□□□□□ -0.56
VEGFA-219ENST00000518824 RHCEP18577 417 aa11.54□□□□□ -0.56
VEGFA-219ENST00000518824 CDAP32320 146 aa11.54□□□□□ -0.56
VEGFA-219ENST00000518824 IFNA8P32881 189 aa11.54□□□□□ -0.56
VEGFA-219ENST00000518824 ACVR1BP36896 505 aa11.54□□□□□ -0.56
VEGFA-219ENST00000518824 OMPP47874 163 aa11.54□□□□□ -0.56
VEGFA-219ENST00000518824 LIMS1P48059 325 aa11.54□□□□□ -0.56
VEGFA-219ENST00000518824 GIPRP48546 466 aa11.54□□□□□ -0.56
VEGFA-219ENST00000518824 CLRN1P58418 232 aa11.54□□□□□ -0.56
VEGFA-219ENST00000518824 FXYD6P3P58550 94 aa11.54□□□□□ -0.56
VEGFA-219ENST00000518824 DBPQ10586 325 aaPredicted RBP11.54□□□□□ -0.56
VEGFA-219ENST00000518824 FGD3Q5JSP0 725 aa11.54□□□□□ -0.56
VEGFA-219ENST00000518824 VHLLQ6RSH7 139 aa11.54□□□□□ -0.56
VEGFA-219ENST00000518824 Q71RC1 249 aaPredicted RBP11.54□□□□□ -0.56
VEGFA-219ENST00000518824 ZNF584Q8IVC4 421 aa11.54□□□□□ -0.56
VEGFA-219ENST00000518824 MUC15Q8N387 334 aa11.54□□□□□ -0.56
VEGFA-219ENST00000518824 NSMCE2Q96MF7 247 aa11.54□□□□□ -0.56
VEGFA-219ENST00000518824 TSPAN32Q96QS1 320 aa11.54□□□□□ -0.56
VEGFA-219ENST00000518824 KATNB1Q9BVA0 655 aa11.54□□□□□ -0.56
VEGFA-219ENST00000518824 CACNG6Q9BXT2 260 aa11.54□□□□□ -0.56
VEGFA-219ENST00000518824 TXNIPQ9H3M7 391 aa11.54□□□□□ -0.56
VEGFA-219ENST00000518824 CBLN4Q9NTU7 201 aa11.54□□□□□ -0.56
VEGFA-219ENST00000518824 ADAM18Q9Y3Q7 739 aa11.54□□□□□ -0.56
VEGFA-219ENST00000518824 UGT2A1Q9Y4X1 527 aa11.54□□□□□ -0.56
VEGFA-219ENST00000518824 A0A1W2PRQ8 180 aa11.53□□□□□ -0.56
VEGFA-219ENST00000518824 TCRBV5S2A0A599 114 aa11.53□□□□□ -0.56
VEGFA-219ENST00000518824 H7C1C5 153 aa11.53□□□□□ -0.56
VEGFA-219ENST00000518824 PTDSS1P48651 473 aaKnown RBP11.53□□□□□ -0.56
VEGFA-219ENST00000518824 RPL27P61353 136 aaKnown RBP11.53□□□□□ -0.56
VEGFA-219ENST00000518824 LCN6P62502 163 aa11.53□□□□□ -0.56
VEGFA-219ENST00000518824 ERVK-25P63136 954 aa11.53□□□□□ -0.56
VEGFA-219ENST00000518824 DGCR6Q14129 220 aa11.53□□□□□ -0.56
VEGFA-219ENST00000518824 RAB39AQ14964 217 aa11.53□□□□□ -0.56
VEGFA-219ENST00000518824 GSG1Q2KHT4 349 aa11.53□□□□□ -0.56
VEGFA-219ENST00000518824 AGAP6Q5VW22 663 aa11.53□□□□□ -0.56
VEGFA-219ENST00000518824 SLC25A47Q6Q0C1 308 aa11.53□□□□□ -0.56
VEGFA-219ENST00000518824 PRSS57Q6UWY2 283 aa11.53□□□□□ -0.56
VEGFA-219ENST00000518824 THSD4Q6ZMP0 1018 aa11.53□□□□□ -0.56
VEGFA-219ENST00000518824 TMPRSS11FQ6ZWK6 438 aa11.53□□□□□ -0.56
VEGFA-219ENST00000518824 OAFQ86UD1 273 aa11.53□□□□□ -0.56
VEGFA-219ENST00000518824 RNF113BQ8IZP6 322 aaKnown RBP11.53□□□□□ -0.56
VEGFA-219ENST00000518824 FBXL14Q8N1E6 418 aa11.53□□□□□ -0.56
VEGFA-219ENST00000518824 DEPDC4Q8N2C3 294 aa11.53□□□□□ -0.56
VEGFA-219ENST00000518824 SLC22A24Q8N4F4 322 aa11.53□□□□□ -0.56
VEGFA-219ENST00000518824 FAM169BQ8N8A8 192 aa11.53□□□□□ -0.56
VEGFA-219ENST00000518824 OR4K5Q8NGD3 323 aa11.53□□□□□ -0.56
VEGFA-219ENST00000518824 ZNF519Q8TB69 540 aa11.53□□□□□ -0.56
VEGFA-219ENST00000518824 NSMAFQ92636 917 aa11.53□□□□□ -0.56
VEGFA-219ENST00000518824 FBXO17Q96EF6 278 aa11.53□□□□□ -0.56
VEGFA-219ENST00000518824 KCNK17Q96T54 332 aa11.53□□□□□ -0.56
VEGFA-219ENST00000518824 TAS2R1Q9NYW7 299 aa11.53□□□□□ -0.56
VEGFA-219ENST00000518824 IL20RAQ9UHF4 553 aa11.53□□□□□ -0.56
VEGFA-219ENST00000518824 RTTNQ86VV8 2226 aa11.52□□□□□ -0.56
VEGFA-219ENST00000518824 SMAD7O15105 426 aaKnown RBP11.52□□□□□ -0.57
VEGFA-219ENST00000518824 PTP4A3O75365 173 aa11.52□□□□□ -0.57
VEGFA-219ENST00000518824 GMNNO75496 209 aa11.52□□□□□ -0.57
VEGFA-219ENST00000518824 LY6HO94772 140 aa11.52□□□□□ -0.57
VEGFA-219ENST00000518824 IGHMP01871 453 aa11.52□□□□□ -0.57
VEGFA-219ENST00000518824 CRYAAP02489 173 aa11.52□□□□□ -0.57
VEGFA-219ENST00000518824 SCG5P05408 212 aa11.52□□□□□ -0.57
VEGFA-219ENST00000518824 CCL2P13500 99 aa11.52□□□□□ -0.57
VEGFA-219ENST00000518824 CALB2P22676 271 aa11.52□□□□□ -0.57
VEGFA-219ENST00000518824 APOBEC3AP31941 199 aaPredicted RBP11.52□□□□□ -0.57
VEGFA-219ENST00000518824 THBS4P35443 961 aa11.52□□□□□ -0.57
VEGFA-219ENST00000518824 ARR3P36575 388 aa11.52□□□□□ -0.57
VEGFA-219ENST00000518824 SLC9A3P48764 834 aa11.52□□□□□ -0.57
VEGFA-219ENST00000518824 DAP3P51398 398 aaKnown RBP11.52□□□□□ -0.57
VEGFA-219ENST00000518824 ZNF133P52736 654 aaPredicted RBP11.52□□□□□ -0.57
VEGFA-219ENST00000518824 RAB1AP62820 205 aa11.52□□□□□ -0.57
VEGFA-219ENST00000518824 SPIBQ01892 262 aa11.52□□□□□ -0.57
VEGFA-219ENST00000518824 TNK1Q13470 666 aa11.52□□□□□ -0.57
VEGFA-219ENST00000518824 ADIPOQQ15848 244 aa11.52□□□□□ -0.57
VEGFA-219ENST00000518824 ETFDHQ16134 617 aa11.52□□□□□ -0.57
VEGFA-219ENST00000518824 C3orf36Q3SXR2 165 aa11.52□□□□□ -0.57
VEGFA-219ENST00000518824 C1QTNF12Q5T7M4 302 aa11.52□□□□□ -0.57
VEGFA-219ENST00000518824 OTPQ5XKR4 325 aa11.52□□□□□ -0.57
VEGFA-219ENST00000518824 KRT80Q6KB66 452 aa11.52□□□□□ -0.57
VEGFA-219ENST00000518824 CYP4Z1Q86W10 505 aa11.52□□□□□ -0.57
VEGFA-219ENST00000518824 LRRC18Q8N456 261 aa11.52□□□□□ -0.57
VEGFA-219ENST00000518824 PAQR4Q8N4S7 273 aaPredicted RBP11.52□□□□□ -0.57
VEGFA-219ENST00000518824 MAPK1IP1LQ8NDC0 245 aa11.52□□□□□ -0.57
VEGFA-219ENST00000518824 BCAS4Q8TDM0 211 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms