RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 MELKQ14680 651 aa9.94□□□□□ -0.82
PCDHGA1-202ENST00000517417 TMEM196Q5HYL7 178 aa9.94□□□□□ -0.82
PCDHGA1-202ENST00000517417 LRRC69Q6ZNQ3 347 aa9.94□□□□□ -0.82
PCDHGA1-202ENST00000517417 OR6V1Q8N148 313 aa9.94□□□□□ -0.82
PCDHGA1-202ENST00000517417 ELSPBP1Q96BH3 223 aa9.94□□□□□ -0.82
PCDHGA1-202ENST00000517417 GAREM1Q9H706 876 aa9.94□□□□□ -0.82
PCDHGA1-202ENST00000517417 AUNIPQ9H7T9 357 aa9.94□□□□□ -0.82
PCDHGA1-202ENST00000517417 NRIP3Q9NQ35 241 aa9.94□□□□□ -0.82
PCDHGA1-202ENST00000517417 DSPPQ9NZW4 1301 aa9.94□□□□□ -0.82
PCDHGA1-202ENST00000517417 ANKRD36A6QL64 1941 aa9.94□□□□□ -0.82
PCDHGA1-202ENST00000517417 LAMA3Q16787 3333 aa9.94□□□□□ -0.82
PCDHGA1-202ENST00000517417 H7C2Y5 167 aa9.94□□□□□ -0.82
PCDHGA1-202ENST00000517417 ZNF749O43361 778 aa9.94□□□□□ -0.82
PCDHGA1-202ENST00000517417 SBK2P0C263 348 aa9.94□□□□□ -0.82
PCDHGA1-202ENST00000517417 CD1CP29017 333 aa9.94□□□□□ -0.82
PCDHGA1-202ENST00000517417 DLX5P56178 289 aa9.94□□□□□ -0.82
PCDHGA1-202ENST00000517417 ARG2P78540 354 aa9.94□□□□□ -0.82
PCDHGA1-202ENST00000517417 ZNF616Q08AN1 781 aa9.94□□□□□ -0.82
PCDHGA1-202ENST00000517417 GSG1LQ6UXU4 331 aa9.94□□□□□ -0.82
PCDHGA1-202ENST00000517417 MARCH3Q86UD3 253 aa9.94□□□□□ -0.82
PCDHGA1-202ENST00000517417 SLC35F3Q8IY50 421 aa9.94□□□□□ -0.82
PCDHGA1-202ENST00000517417 FBXL6Q8N531 539 aa9.94□□□□□ -0.82
PCDHGA1-202ENST00000517417 AMER3Q8N944 861 aa9.94□□□□□ -0.82
PCDHGA1-202ENST00000517417 CLEC1AQ8NC01 280 aa9.94□□□□□ -0.82
PCDHGA1-202ENST00000517417 ACBD4Q8NC06 268 aa9.94□□□□□ -0.82
PCDHGA1-202ENST00000517417 SLC35A4Q96G79 324 aa9.94□□□□□ -0.82
PCDHGA1-202ENST00000517417 PRDM9Q9NQV7 894 aa9.94□□□□□ -0.82
PCDHGA1-202ENST00000517417 SDHAF2Q9NX18 166 aa9.94□□□□□ -0.82
PCDHGA1-202ENST00000517417 ZNF281Q9Y2X9 895 aa9.94□□□□□ -0.82
PCDHGA1-202ENST00000517417 MAGEB4O15481 346 aaPredicted RBP9.93□□□□□ -0.82
PCDHGA1-202ENST00000517417 ATP1B1P05026 303 aa9.93□□□□□ -0.82
PCDHGA1-202ENST00000517417 GABRR1P24046 479 aa9.93□□□□□ -0.82
PCDHGA1-202ENST00000517417 PCBP4P57723 403 aaKnown RBP9.93□□□□□ -0.82
PCDHGA1-202ENST00000517417 PRSS53Q2L4Q9 553 aa9.93□□□□□ -0.82
PCDHGA1-202ENST00000517417 TRIM61Q5EBN2 209 aa9.93□□□□□ -0.82
PCDHGA1-202ENST00000517417 NDUFAF7Q7L592 441 aa9.93□□□□□ -0.82
PCDHGA1-202ENST00000517417 OR14A16Q8NHC5 309 aa9.93□□□□□ -0.82
PCDHGA1-202ENST00000517417 RASD2Q96D21 266 aa9.93□□□□□ -0.82
PCDHGA1-202ENST00000517417 SDF2Q99470 211 aa9.93□□□□□ -0.82
PCDHGA1-202ENST00000517417 MFFQ9GZY8 342 aa9.93□□□□□ -0.82
PCDHGA1-202ENST00000517417 GPR55Q9Y2T6 319 aaPredicted RBP9.93□□□□□ -0.82
PCDHGA1-202ENST00000517417 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.93□□□□□ -0.82
PCDHGA1-202ENST00000517417 TMEM265A0A087WTH1 108 aa9.93□□□□□ -0.82
PCDHGA1-202ENST00000517417 BORCS7-ASMTA0A0B4J1R7 106 aa9.93□□□□□ -0.82
PCDHGA1-202ENST00000517417 DVL2O14641 736 aa9.93□□□□□ -0.82
PCDHGA1-202ENST00000517417 TNFRSF10CO14798 259 aa9.93□□□□□ -0.82
PCDHGA1-202ENST00000517417 IGHG1P01857 330 aa9.93□□□□□ -0.82
PCDHGA1-202ENST00000517417 POU3F2P20265 443 aaPredicted RBP9.93□□□□□ -0.82
PCDHGA1-202ENST00000517417 IL32P24001 234 aa9.93□□□□□ -0.82
PCDHGA1-202ENST00000517417 CCR9P51686 369 aa9.93□□□□□ -0.82
PCDHGA1-202ENST00000517417 HCCSP53701 268 aa9.93□□□□□ -0.82
PCDHGA1-202ENST00000517417 DCDP81605 110 aaKnown RBP9.93□□□□□ -0.82
PCDHGA1-202ENST00000517417 RPL22L1Q6P5R6 122 aaKnown RBP9.93□□□□□ -0.82
PCDHGA1-202ENST00000517417 MRPL21Q7Z2W9 205 aaKnown RBP9.93□□□□□ -0.82
PCDHGA1-202ENST00000517417 KCTD20Q7Z5Y7 419 aa9.93□□□□□ -0.82
PCDHGA1-202ENST00000517417 LINC00346Q8IVM7 164 aa9.93□□□□□ -0.82
PCDHGA1-202ENST00000517417 OR7G2Q8NG99 324 aa9.93□□□□□ -0.82
PCDHGA1-202ENST00000517417 OR13C9Q8NGT0 318 aa9.93□□□□□ -0.82
PCDHGA1-202ENST00000517417 NOX4Q9NPH5 578 aa9.93□□□□□ -0.82
PCDHGA1-202ENST00000517417 BLACEA4D250 179 aa9.93□□□□□ -0.82
PCDHGA1-202ENST00000517417 NAT1P18440 290 aa9.93□□□□□ -0.82
PCDHGA1-202ENST00000517417 CD27P26842 260 aa9.93□□□□□ -0.82
PCDHGA1-202ENST00000517417 VWA2Q5GFL6 755 aa9.93□□□□□ -0.82
PCDHGA1-202ENST00000517417 MORN4Q8NDC4 146 aa9.93□□□□□ -0.82
PCDHGA1-202ENST00000517417 OR5D18Q8NGL1 313 aa9.93□□□□□ -0.82
PCDHGA1-202ENST00000517417 OR2A1Q8NGT9 310 aa9.93□□□□□ -0.82
PCDHGA1-202ENST00000517417 RNF170Q96K19 258 aa9.93□□□□□ -0.82
PCDHGA1-202ENST00000517417 NECAB3Q96P71 396 aaPredicted RBP9.93□□□□□ -0.82
PCDHGA1-202ENST00000517417 CDC6Q99741 560 aa9.93□□□□□ -0.82
PCDHGA1-202ENST00000517417 APMAPQ9HDC9 416 aa9.93□□□□□ -0.82
PCDHGA1-202ENST00000517417 MMP17Q9ULZ9 603 aa9.93□□□□□ -0.82
PCDHGA1-202ENST00000517417 CNOT1A5YKK6 2376 aaKnown RBP9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 LANCL1O43813 399 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 OR2T7P0C7T2 308 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 ANXA7P20073 488 aaKnown RBP9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 MECP2P51608 486 aaKnown RBP9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 LTBQ06643 244 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 CLLU1Q5K131 121 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 ZBTB44Q8NCP5 570 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 OR2T27Q8NH04 317 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 TTC9Q92623 222 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 ABHD1Q96SE0 405 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 PDCD1LG2Q9BQ51 273 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 WFDC6Q9BQY6 131 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 VN1R3Q9BXE9 311 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 FOXQ1Q9C009 403 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 SLC38A1Q9H2H9 487 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 CDH20Q9HBT6 801 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 HS3ST3A1Q9Y663 406 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 TMED7-TICAM2A0A0A6YYA0 188 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 A0A0B4J293 547 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 SSX5O60225 188 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 ZNF250P15622 560 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 TRHRP34981 398 aaPredicted RBP9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 SEC61A1P61619 476 aaKnown RBP9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 MRPS10P82664 201 aaKnown RBP9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 ST3GAL2Q16842 350 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 LIX1LQ8IVB5 337 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 ZNF709Q8N972 641 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 FAM181AQ8N9Y4 354 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms