RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 TRBV4-1A0A0J9YWV2 114 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 A0A1W2PRQ8 180 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 TCRBV3S1A0A5B6 114 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 HTR3EA5X5Y0 456 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 ZNF503-AS2A6NEH8 195 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 ERICH4A6NGS2 130 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 ZNF726A6NNF4 738 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 ENO4A6NNW6 628 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 ZNF716A6NP11 495 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 A8MXE2 369 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 EFCAB9A8MZ26 197 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 MS4A18H0YCH9 400 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 PLPP3O14495 311 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 RNF13O43567 381 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 OR10H3O60404 316 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 SS18L1O75177 396 aaPredicted RBP5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 FKBP6O75344 327 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 KRT33AO76009 404 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 OR7A10O76100 309 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 PRSS23O95084 383 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 CST1P01037 141 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 IGHV3-9P01782 118 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 CSTBP04080 98 aaKnown RBP5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 CD1AP06126 327 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 SAGP10523 405 aaPredicted RBP5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 AGTR1P30556 359 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 IFNGR2P38484 337 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 GPR4P46093 362 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 P2RY4P51582 365 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 GP2P55259 537 aaKnown RBP5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 CLDN17P56750 224 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 RPS16P62249 146 aaKnown RBP5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 PRKCDQ05655 676 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 FAM27E3Q08E93 113 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 SNTB1Q13884 538 aaKnown RBP5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 DGCR6Q14129 220 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 SLC17A1Q14916 467 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 SEC23BQ15437 767 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 MS4A18Q3C1V0 323 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 PRR31Q5SQ13 230 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 SP5Q6BEB4 398 aaPredicted RBP5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 OR2T5Q6IEZ7 315 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 NIPAL3Q6P499 406 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 ZNF474Q6S9Z5 364 aaPredicted RBP5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 CREB3L2Q70SY1 520 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 NANOGNBQ7Z5D8 188 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 YTHDF3Q7Z739 585 aaKnown RBP5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 PXKQ7Z7A4 578 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 EPHX4Q8IUS5 362 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 UEVLDQ8IX04 471 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 UBE2J2Q8N2K1 259 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 SCAIQ8N9R8 606 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 RELL2Q8NC24 303 aaPredicted RBP5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 OR4K5Q8NGD3 323 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 OR6K3Q8NGY3 331 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 OR2T29Q8NH02 315 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 OR51A7Q8NH64 312 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 ZNF385AQ96PM9 386 aaKnown RBP5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 TNFRSF13CQ96RJ3 184 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 DIRC2Q96SL1 478 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 SF3B5Q9BWJ5 86 aaKnown RBP5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 RBM24Q9BX46 236 aaKnown RBP5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 ANKRD19PQ9H560 264 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 REEP1Q9H902 201 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 FKRPQ9H9S5 495 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 KRCC1Q9NPI7 259 aaPredicted RBP5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 FANCFQ9NPI8 374 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 PLSCR4Q9NRQ2 329 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 MAN2C1Q9NTJ4 1040 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 MRPL39Q9NYK5 338 aaKnown RBP5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 UPB1Q9UBR1 384 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 ZNF229Q9UJW7 825 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 ING1Q9UK53 422 aaPredicted RBP5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 GPR52Q9Y2T5 361 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 SAMHD1Q9Y3Z3 626 aaKnown RBP5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 FLVCR1Q9Y5Y0 555 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 U3KQV3 271 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 KIAA1549Q9HCM3 1950 aa5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 PHF3Q92576 2039 aaKnown RBP5.13□□□□□ -1.59
SCARNA6.1-201ENST00000516989 SPTBN1Q01082 2364 aaKnown RBP5.12□□□□□ -1.59
SCARNA6.1-201ENST00000516989 SPENQ96T58 3664 aaKnown RBP5.12□□□□□ -1.59
SCARNA6.1-201ENST00000516989 IGKV3D-15A0A087WSY6 115 aa5.12□□□□□ -1.59
SCARNA6.1-201ENST00000516989 LOC102725191A0A1B0GVB3 256 aa5.12□□□□□ -1.59
SCARNA6.1-201ENST00000516989 SH3PXD2BA1X283 911 aa5.12□□□□□ -1.59
SCARNA6.1-201ENST00000516989 PRSS29PA6NIE9 313 aa5.12□□□□□ -1.59
SCARNA6.1-201ENST00000516989 ANKRD65E5RJM6 399 aa5.12□□□□□ -1.59
SCARNA6.1-201ENST00000516989 C19orf84I3L1E1 186 aa5.12□□□□□ -1.59
SCARNA6.1-201ENST00000516989 CLOCKO15516 846 aa5.12□□□□□ -1.59
SCARNA6.1-201ENST00000516989 E2F6O75461 281 aa5.12□□□□□ -1.59
SCARNA6.1-201ENST00000516989 TIPRLO75663 272 aa5.12□□□□□ -1.59
SCARNA6.1-201ENST00000516989 TOX4O94842 621 aa5.12□□□□□ -1.59
SCARNA6.1-201ENST00000516989 CCNB2O95067 398 aa5.12□□□□□ -1.59
SCARNA6.1-201ENST00000516989 CLDN1O95832 211 aa5.12□□□□□ -1.59
SCARNA6.1-201ENST00000516989 BCL10O95999 233 aa5.12□□□□□ -1.59
SCARNA6.1-201ENST00000516989 HPRP00739 348 aa5.12□□□□□ -1.59
SCARNA6.1-201ENST00000516989 ADAP00813 363 aa5.12□□□□□ -1.59
SCARNA6.1-201ENST00000516989 CGAP01215 116 aa5.12□□□□□ -1.59
SCARNA6.1-201ENST00000516989 ASAH2BP0C7U1 165 aa5.12□□□□□ -1.59
SCARNA6.1-201ENST00000516989 HLA-DOBP13765 273 aa5.12□□□□□ -1.59
SCARNA6.1-201ENST00000516989 POU2F1P14859 743 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms