RNA–Protein interactions for RNA: ENST00000514621.5

HIPK1-210, Transcript of homeodomain interacting protein kinase 1, human

TSL 4

Gene HIPK1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIPK1-210	ENST00000514621	TMEM255B	Q8WV15	326 aa		5.84	□□□□□ -1.47
HIPK1-210	ENST00000514621	DNAJC9	Q8WXX5	260 aa		5.84	□□□□□ -1.47
HIPK1-210	ENST00000514621	ZNF559	Q9BR84	538 aa		5.84	□□□□□ -1.47
HIPK1-210	ENST00000514621	TP63	Q9H3D4	680 aa	Predicted RBP	5.84	□□□□□ -1.47
HIPK1-210	ENST00000514621	RIBC2	Q9H4K1	309 aa		5.84	□□□□□ -1.47
HIPK1-210	ENST00000514621	ALKBH4	Q9NXW9	302 aa		5.84	□□□□□ -1.47
HIPK1-210	ENST00000514621	RPS6KB2	Q9UBS0	482 aa		5.84	□□□□□ -1.47
HIPK1-210	ENST00000514621	TMCC3	Q9ULS5	477 aa		5.84	□□□□□ -1.47
HIPK1-210	ENST00000514621	FAM215A	Q9Y5M1	114 aa		5.84	□□□□□ -1.47
HIPK1-210	ENST00000514621	AP4B1	Q9Y6B7	739 aa		5.84	□□□□□ -1.47
HIPK1-210	ENST00000514621	MED12	Q93074	2177 aa		5.84	□□□□□ -1.47
HIPK1-210	ENST00000514621	LRRK2	Q5S007	2527 aa		5.84	□□□□□ -1.47
HIPK1-210	ENST00000514621	HIVEP3	Q5T1R4	2406 aa		5.84	□□□□□ -1.48
HIPK1-210	ENST00000514621	DNAJC13	O75165	2243 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621		A0A0B4J2E0	115 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621		A0A1B0GX12	115 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621		A0A1W2PRQ8	180 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	SH3PXD2B	A1X283	911 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	WIPF3	A6NGB9	483 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	KDM4E	B2RXH2	506 aa	Predicted RBP	5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621		H0YC42	278 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	FAAH	O00519	579 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	FMO6P	O60774	539 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	LYPD3	O95274	346 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	SOX14	O95416	240 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	SNAP29	O95721	258 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	HPR	P00739	348 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	GRP	P07492	148 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	HOXD4	P09016	255 aa	Predicted RBP	5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	RNF224	P0DH78	156 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	THRB	P10828	461 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	PEPD	P12955	493 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	GABRA1	P14867	456 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	UQCRB	P14927	111 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	CCNA2	P20248	432 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	IFNA8	P32881	189 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	PTGER4	P35408	488 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	GPR4	P46093	362 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	DAP	P51397	102 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	ALDH3A2	P51648	485 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	TPD52	P55327	224 aa	Predicted RBP	5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	DLX5	P56178	289 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	NUP107	P57740	925 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	COPZ1	P61923	177 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	ADORA2A-AS1	P86434	159 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	PPP2R2B	Q00005	443 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	KRTAP1-1	Q07627	177 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	ST3GAL3	Q11203	375 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	MERTK	Q12866	999 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	DGCR6	Q14129	220 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	TAF11	Q15544	211 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	MICA	Q29983	383 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	ACSF3	Q4G176	576 aa	Predicted RBP	5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	PPP4R4	Q6NUP7	873 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	ZNF613	Q6PF04	617 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	DTX2	Q86UW9	622 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	PM20D2	Q8IYS1	436 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	UBQLNL	Q8IYU4	475 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	OR4K5	Q8NGD3	323 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	PFN4	Q8NHR9	129 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	SLC7A13	Q8TCU3	470 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	ZPLD1	Q8TCW7	415 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	CYGB	Q8WWM9	190 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	TMEM234	Q8WY98	164 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	ST8SIA1	Q92185	356 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	SMPDL3B	Q92485	455 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	SLC35B4	Q969S0	331 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	DNAJA3	Q96EY1	480 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	MBOAT4	Q96T53	435 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	FEV	Q99581	238 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	NIPSNAP1	Q9BPW8	284 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	RBM4B	Q9BQ04	359 aa	Known RBP	5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	TUBA1C	Q9BQE3	449 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	PRSS27	Q9BQR3	290 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	PTDSS2	Q9BVG9	487 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	RBM4	Q9BWF3	364 aa	Known RBP	5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	OSBPL10	Q9BXB5	764 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	TRIM2	Q9C040	744 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	TMEM185B	Q9H7F4	350 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	TMEM27	Q9HBJ8	222 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	KRT84	Q9NSB2	600 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	SMPD3	Q9NY59	655 aa	Predicted RBP	5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	USE1	Q9NZ43	259 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621	PRDM4	Q9UKN5	801 aa		5.83	□□□□□ -1.48
HIPK1-210	ENST00000514621		A0A087WUU8	490 aa		5.82	□□□□□ -1.48
HIPK1-210	ENST00000514621		A0A0J9YW62	118 aa		5.82	□□□□□ -1.48
HIPK1-210	ENST00000514621	CD8B2	A6NJW9	211 aa		5.82	□□□□□ -1.48
HIPK1-210	ENST00000514621	ENO4	A6NNW6	628 aa		5.82	□□□□□ -1.48
HIPK1-210	ENST00000514621	CLCA1	A8K7I4	914 aa		5.82	□□□□□ -1.48
HIPK1-210	ENST00000514621	DLGAP1	O14490	977 aa		5.82	□□□□□ -1.48
HIPK1-210	ENST00000514621	SEC14L5	O43304	696 aa		5.82	□□□□□ -1.48
HIPK1-210	ENST00000514621	CHP2	O43745	196 aa		5.82	□□□□□ -1.48
HIPK1-210	ENST00000514621	CLIC3	O95833	236 aa		5.82	□□□□□ -1.48
HIPK1-210	ENST00000514621	GP1BB	P13224	206 aa		5.82	□□□□□ -1.48
HIPK1-210	ENST00000514621	FUT1	P19526	365 aa		5.82	□□□□□ -1.48
HIPK1-210	ENST00000514621	CBL	P22681	906 aa		5.82	□□□□□ -1.48
HIPK1-210	ENST00000514621	ELK4	P28324	431 aa		5.82	□□□□□ -1.48
HIPK1-210	ENST00000514621	SHC1	P29353	583 aa		5.82	□□□□□ -1.48
HIPK1-210	ENST00000514621	TACR3	P29371	465 aa		5.82	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms