RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 TMEM204Q9BSN7 226 aa12.19□□□□□ -0.46
USP46-209ENST00000514536 CCM2LQ9NUG4 571 aaPredicted RBP12.19□□□□□ -0.46
USP46-209ENST00000514536 RNF115Q9Y4L5 304 aa12.19□□□□□ -0.46
USP46-209ENST00000514536 IER3IP1Q9Y5U9 82 aa12.19□□□□□ -0.46
USP46-209ENST00000514536 MAGED1Q9Y5V3 778 aaPredicted RBP12.19□□□□□ -0.46
USP46-209ENST00000514536 ARPC4-TTLL3A0A0A6YYG9 625 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 A6NIZ1 184 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 HOXB6P17509 224 aaKnown RBP12.18□□□□□ -0.46
USP46-209ENST00000514536 CAPZA2P47755 286 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 IST1P53990 364 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 RAP1BP61224 184 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 RAP1AP62834 184 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 CD47Q08722 323 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 TSPAN31Q12999 210 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 MICAQ29983 383 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 RFX4Q33E94 735 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 C1QTNF12Q5T7M4 302 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 FAM205BPQ63HN1 556 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 ZNF770Q6IQ21 691 aaPredicted RBP12.18□□□□□ -0.46
USP46-209ENST00000514536 SMARCD3Q6STE5 483 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 TMEM108Q6UXF1 575 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 DPY19L2P2Q6ZN68 376 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 CDH24Q86UP0 819 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 CLDN22Q8N7P3 220 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 PAPD5Q8NDF8 572 aaKnown RBP12.18□□□□□ -0.46
USP46-209ENST00000514536 RBP7Q96R05 134 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 KCNK17Q96T54 332 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 YY1AP1Q9H869 796 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 UBTD1Q9HAC8 227 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 NRIP3Q9NQ35 241 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 OTOGQ6ZRI0 2925 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 PDZD2O15018 2839 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 ZNF503-AS2A6NEH8 195 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 ABCD4O14678 606 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 CIB2O75838 187 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 SLC2A10O95528 541 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 PTAFRP25105 342 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 CD40P25942 277 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 FMODQ06828 376 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 ADAM5Q6NVV9 412 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 ZNF627Q7L945 461 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 FAM122BQ7Z309 247 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 CCDC36Q8IYA8 594 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 AQP11Q8NBQ7 271 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 LILRB1Q8NHL6 650 aaPredicted RBP12.18□□□□□ -0.46
USP46-209ENST00000514536 FANK1Q8TC84 345 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 NSMAFQ92636 917 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 HTRA1Q92743 480 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 NEUROG1Q92886 237 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 UTP4Q969X6 686 aaKnown RBP12.18□□□□□ -0.46
USP46-209ENST00000514536 RASD2Q96D21 266 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 NMD3Q96D46 503 aaKnown RBP12.18□□□□□ -0.46
USP46-209ENST00000514536 SAMD8Q96LT4 415 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 GPX7Q96SL4 187 aaPredicted RBP12.18□□□□□ -0.46
USP46-209ENST00000514536 ALG12Q9BV10 488 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 OR52D1Q9H346 318 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 TMEM38BQ9NVV0 291 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.18□□□□□ -0.46
USP46-209ENST00000514536 ST6GALNAC2Q9UJ37 374 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 PLEKHA6Q9Y2H5 1048 aa12.18□□□□□ -0.46
USP46-209ENST00000514536 CSMD2Q7Z408 3487 aa12.17□□□□□ -0.46
USP46-209ENST00000514536 IGKV1D-43A0A0B4J1Z2 117 aa12.17□□□□□ -0.46
USP46-209ENST00000514536 TEX13CA0A0J9YWL9 993 aa12.17□□□□□ -0.46
USP46-209ENST00000514536 H7C1C5 153 aa12.17□□□□□ -0.46
USP46-209ENST00000514536 HLA-HP01893 362 aa12.17□□□□□ -0.46
USP46-209ENST00000514536 CD79AP11912 226 aa12.17□□□□□ -0.46
USP46-209ENST00000514536 CBR1P16152 277 aa12.17□□□□□ -0.46
USP46-209ENST00000514536 ZNF84P51523 738 aa12.17□□□□□ -0.46
USP46-209ENST00000514536 RPS6KA3P51812 740 aa12.17□□□□□ -0.46
USP46-209ENST00000514536 ZNF133P52736 654 aaPredicted RBP12.17□□□□□ -0.46
USP46-209ENST00000514536 LCN6P62502 163 aa12.17□□□□□ -0.46
USP46-209ENST00000514536 PIGFQ07326 219 aa12.17□□□□□ -0.46
USP46-209ENST00000514536 THEM4Q5T1C6 240 aa12.17□□□□□ -0.46
USP46-209ENST00000514536 SLC25A47Q6Q0C1 308 aa12.17□□□□□ -0.46
USP46-209ENST00000514536 TMEM179BQ7Z7N9 219 aa12.17□□□□□ -0.46
USP46-209ENST00000514536 MDP1Q86V88 176 aa12.17□□□□□ -0.46
USP46-209ENST00000514536 SKA3Q8IX90 412 aa12.17□□□□□ -0.46
USP46-209ENST00000514536 SLC22A24Q8N4F4 322 aa12.17□□□□□ -0.46
USP46-209ENST00000514536 KBTBD8Q8NFY9 601 aa12.17□□□□□ -0.46
USP46-209ENST00000514536 GIPC3Q8TF64 312 aa12.17□□□□□ -0.46
USP46-209ENST00000514536 AKAP1Q92667 903 aaKnown RBP eCLIP12.17□□□□□ -0.46
USP46-209ENST00000514536 GTPBP3Q969Y2 492 aaKnown RBP12.17□□□□□ -0.46
USP46-209ENST00000514536 ZNF570Q96NI8 536 aa12.17□□□□□ -0.46
USP46-209ENST00000514536 ERMAPQ96PL5 475 aaPredicted RBP12.17□□□□□ -0.46
USP46-209ENST00000514536 ITGB1BP2Q9UKP3 347 aa12.17□□□□□ -0.46
USP46-209ENST00000514536 EDARQ9UNE0 448 aa12.17□□□□□ -0.46
USP46-209ENST00000514536 SPG11Q96JI7 2443 aa12.16□□□□□ -0.46
USP46-209ENST00000514536 SHISA9B4DS77 424 aa12.16□□□□□ -0.46
USP46-209ENST00000514536 SOCS2O14508 198 aa12.16□□□□□ -0.46
USP46-209ENST00000514536 XKRYO14609 159 aa12.16□□□□□ -0.46
USP46-209ENST00000514536 TIPRLO75663 272 aa12.16□□□□□ -0.46
USP46-209ENST00000514536 PPP1R3DO95685 299 aa12.16□□□□□ -0.46
USP46-209ENST00000514536 PATE4P0C8F1 98 aa12.16□□□□□ -0.46
USP46-209ENST00000514536 OR8G3PP0DMU2 310 aa12.16□□□□□ -0.46
USP46-209ENST00000514536 NR2C1P13056 603 aa12.16□□□□□ -0.46
USP46-209ENST00000514536 PAX7P23759 505 aa12.16□□□□□ -0.46
USP46-209ENST00000514536 SDHAP31040 664 aa12.16□□□□□ -0.46
USP46-209ENST00000514536 SLC6A6P31641 620 aa12.16□□□□□ -0.46
USP46-209ENST00000514536 CDAP32320 146 aa12.16□□□□□ -0.46
USP46-209ENST00000514536 SPOCK1Q08629 439 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms