RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 PRSS22Q9GZN4 317 aa6.13□□□□□ -1.43
CLDND1-229ENST00000513988 ELOVL6Q9H5J4 265 aa6.13□□□□□ -1.43
CLDND1-229ENST00000513988 ALG9Q9H6U8 611 aa6.13□□□□□ -1.43
CLDND1-229ENST00000513988 SIRT7Q9NRC8 400 aa6.13□□□□□ -1.43
CLDND1-229ENST00000513988 ZNF224Q9NZL3 707 aa6.13□□□□□ -1.43
CLDND1-229ENST00000513988 SORL1Q92673 2214 aa6.13□□□□□ -1.43
CLDND1-229ENST00000513988 TRBV23-1A0A0A0MS06 115 aa6.12□□□□□ -1.43
CLDND1-229ENST00000513988 TMED7-TICAM2A0A0A6YYA0 188 aa6.12□□□□□ -1.43
CLDND1-229ENST00000513988 CCDC189A1A4V9 331 aa6.12□□□□□ -1.43
CLDND1-229ENST00000513988 IFNL4K9M1U5 179 aa6.12□□□□□ -1.43
CLDND1-229ENST00000513988 M0R3G1 203 aa6.12□□□□□ -1.43
CLDND1-229ENST00000513988 SNAP29O95721 258 aa6.12□□□□□ -1.43
CLDND1-229ENST00000513988 CSTAP01040 98 aa6.12□□□□□ -1.43
CLDND1-229ENST00000513988 IFNA6P05013 189 aa6.12□□□□□ -1.43
CLDND1-229ENST00000513988 UBTFL6P0CB48 400 aaPredicted RBP6.12□□□□□ -1.43
CLDND1-229ENST00000513988 B4GALT1P15291 398 aa6.12□□□□□ -1.43
CLDND1-229ENST00000513988 MAGEA3P43357 314 aa6.12□□□□□ -1.43
CLDND1-229ENST00000513988 THBS3P49746 956 aa6.12□□□□□ -1.43
CLDND1-229ENST00000513988 ANXA11P50995 505 aaKnown RBP6.12□□□□□ -1.43
CLDND1-229ENST00000513988 BMXP51813 675 aa6.12□□□□□ -1.43
CLDND1-229ENST00000513988 IL5RAQ01344 420 aa6.12□□□□□ -1.43
CLDND1-229ENST00000513988 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.12□□□□□ -1.43
CLDND1-229ENST00000513988 HSPB3Q12988 150 aa6.12□□□□□ -1.43
CLDND1-229ENST00000513988 PRSS53Q2L4Q9 553 aa6.12□□□□□ -1.43
CLDND1-229ENST00000513988 TBC1D28Q2M2D7 210 aa6.12□□□□□ -1.43
CLDND1-229ENST00000513988 LRRC75BQ2VPJ9 315 aa6.12□□□□□ -1.43
CLDND1-229ENST00000513988 RUNDC3AQ59EK9 446 aa6.12□□□□□ -1.43
CLDND1-229ENST00000513988 TMEM255AQ5JRV8 349 aa6.12□□□□□ -1.43
CLDND1-229ENST00000513988 THEM4Q5T1C6 240 aa6.12□□□□□ -1.43
CLDND1-229ENST00000513988 C9orf66Q5T8R8 295 aa6.12□□□□□ -1.43
CLDND1-229ENST00000513988 RNASEH2BQ5TBB1 312 aaKnown RBP6.12□□□□□ -1.43
CLDND1-229ENST00000513988 LYPD2Q6UXB3 125 aa6.12□□□□□ -1.43
CLDND1-229ENST00000513988 ZNF841Q6ZN19 808 aa6.12□□□□□ -1.43
CLDND1-229ENST00000513988 CENPVQ7Z7K6 275 aaPredicted RBP6.12□□□□□ -1.43
CLDND1-229ENST00000513988 ZC3HC1Q86WB0 502 aaKnown RBP6.12□□□□□ -1.43
CLDND1-229ENST00000513988 C11orf42Q8N5U0 333 aa6.12□□□□□ -1.43
CLDND1-229ENST00000513988 PIK3C3Q8NEB9 887 aa6.12□□□□□ -1.43
CLDND1-229ENST00000513988 OR4X2Q8NGF9 303 aa6.12□□□□□ -1.43
CLDND1-229ENST00000513988 OR51G2Q8NGK0 314 aa6.12□□□□□ -1.43
CLDND1-229ENST00000513988 CDC26Q8NHZ8 85 aa6.12□□□□□ -1.43
CLDND1-229ENST00000513988 STAG3L4Q8TBR4 150 aa6.12□□□□□ -1.43
CLDND1-229ENST00000513988 C16orf78Q8WTQ4 265 aa6.12□□□□□ -1.43
CLDND1-229ENST00000513988 ITLN1Q8WWA0 313 aa6.12□□□□□ -1.43
CLDND1-229ENST00000513988 CDS1Q92903 461 aa6.12□□□□□ -1.43
CLDND1-229ENST00000513988 ATP6V1E2Q96A05 226 aa6.12□□□□□ -1.43
CLDND1-229ENST00000513988 ZNF382Q96SR6 550 aa6.12□□□□□ -1.43
CLDND1-229ENST00000513988 OSBPL9Q96SU4 736 aa6.12□□□□□ -1.43
CLDND1-229ENST00000513988 PRPF18Q99633 342 aaKnown RBP6.12□□□□□ -1.43
CLDND1-229ENST00000513988 TCF7L2Q9NQB0 619 aa6.12□□□□□ -1.43
CLDND1-229ENST00000513988 MIEF1Q9NQG6 463 aa6.12□□□□□ -1.43
CLDND1-229ENST00000513988 FARSBQ9NSD9 589 aaKnown RBP6.12□□□□□ -1.43
CLDND1-229ENST00000513988 GLS2Q9UI32 602 aa6.12□□□□□ -1.43
CLDND1-229ENST00000513988 PACSIN2Q9UNF0 486 aaPredicted RBP6.12□□□□□ -1.43
CLDND1-229ENST00000513988 POFUT2Q9Y2G5 429 aa6.12□□□□□ -1.43
CLDND1-229ENST00000513988 TMED7Q9Y3B3 224 aa6.12□□□□□ -1.43
CLDND1-229ENST00000513988 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.11□□□□□ -1.43
CLDND1-229ENST00000513988 TMEM72A0PK05 275 aa6.11□□□□□ -1.43
CLDND1-229ENST00000513988 ZC3H12DA2A288 527 aaKnown RBP6.11□□□□□ -1.43
CLDND1-229ENST00000513988 MEGF11A6BM72 1044 aa6.11□□□□□ -1.43
CLDND1-229ENST00000513988 LIPT2A6NK58 231 aa6.11□□□□□ -1.43
CLDND1-229ENST00000513988 SMTNL1A8MU46 457 aa6.11□□□□□ -1.43
CLDND1-229ENST00000513988 MIF4GDA9UHW6 222 aaKnown RBP6.11□□□□□ -1.43
CLDND1-229ENST00000513988 NPIPB9F8W1W9 429 aa6.11□□□□□ -1.43
CLDND1-229ENST00000513988 SURF4O15260 269 aa6.11□□□□□ -1.43
CLDND1-229ENST00000513988 ZNF208O43345 1280 aa6.11□□□□□ -1.43
CLDND1-229ENST00000513988 SCN2BO60939 215 aa6.11□□□□□ -1.43
CLDND1-229ENST00000513988 URI1O94763 535 aaPredicted RBP6.11□□□□□ -1.43
CLDND1-229ENST00000513988 CYB5R3P00387 301 aaPredicted RBP6.11□□□□□ -1.43
CLDND1-229ENST00000513988 PATE4P0C8F1 98 aa6.11□□□□□ -1.43
CLDND1-229ENST00000513988 DDCP20711 480 aa6.11□□□□□ -1.43
CLDND1-229ENST00000513988 AQP5P55064 265 aa6.11□□□□□ -1.43
CLDND1-229ENST00000513988 TMEM95Q3KNT9 176 aa6.11□□□□□ -1.43
CLDND1-229ENST00000513988 CDONQ4KMG0 1287 aa6.11□□□□□ -1.43
CLDND1-229ENST00000513988 PDZK1Q5T2W1 519 aa6.11□□□□□ -1.43
CLDND1-229ENST00000513988 SEL1L2Q5TEA6 688 aa6.11□□□□□ -1.43
CLDND1-229ENST00000513988 METAP1DQ6UB28 335 aaPredicted RBP6.11□□□□□ -1.43
CLDND1-229ENST00000513988 DCDC5Q6ZRR9 648 aa6.11□□□□□ -1.43
CLDND1-229ENST00000513988 ZNF551Q7Z340 670 aaPredicted RBP6.11□□□□□ -1.43
CLDND1-229ENST00000513988 PEX26Q7Z412 305 aa6.11□□□□□ -1.43
CLDND1-229ENST00000513988 LSRQ86X29 649 aaPredicted RBP6.11□□□□□ -1.43
CLDND1-229ENST00000513988 MAPKAPK5-AS1Q8N8E1 139 aa6.11□□□□□ -1.43
CLDND1-229ENST00000513988 OR2Z1Q8NG97 314 aa6.11□□□□□ -1.43
CLDND1-229ENST00000513988 OR1J2Q8NGS2 313 aa6.11□□□□□ -1.43
CLDND1-229ENST00000513988 DCAKDQ8WVC6 231 aa6.11□□□□□ -1.43
CLDND1-229ENST00000513988 RORBQ92753 470 aa6.11□□□□□ -1.43
CLDND1-229ENST00000513988 GIMAP5Q96F15 307 aa6.11□□□□□ -1.43
CLDND1-229ENST00000513988 SPATA25Q9BR10 227 aa6.11□□□□□ -1.43
CLDND1-229ENST00000513988 LRMDAQ9H2I8 198 aa6.11□□□□□ -1.43
CLDND1-229ENST00000513988 C1orf198Q9H425 327 aa6.11□□□□□ -1.43
CLDND1-229ENST00000513988 BRF2Q9HAW0 419 aa6.11□□□□□ -1.43
CLDND1-229ENST00000513988 VPS29Q9UBQ0 182 aa6.11□□□□□ -1.43
CLDND1-229ENST00000513988 RASD1Q9Y272 281 aa6.11□□□□□ -1.43
CLDND1-229ENST00000513988 PSAT1Q9Y617 370 aa6.11□□□□□ -1.43
CLDND1-229ENST00000513988 KPTNQ9Y664 436 aa6.11□□□□□ -1.43
CLDND1-229ENST00000513988 TP73O15350 636 aa6.1□□□□□ -1.43
CLDND1-229ENST00000513988 TIMM8AO60220 97 aaPredicted RBP6.1□□□□□ -1.43
CLDND1-229ENST00000513988 WISP3O95389 354 aaPredicted RBP6.1□□□□□ -1.43
CLDND1-229ENST00000513988 PDYNP01213 254 aa6.1□□□□□ -1.43
CLDND1-229ENST00000513988 RBMY1A1P0DJD3 496 aaKnown RBP6.1□□□□□ -1.43
CLDND1-229ENST00000513988 ZNF43P17038 809 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms