RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 SNTB2Q13425 540 aaKnown RBP4.04□□□□□ -1.76
HTT-211ENST00000513326 ZNHIT3Q15649 155 aaPredicted RBP4.04□□□□□ -1.76
HTT-211ENST00000513326 FAM189A2Q15884 450 aa4.04□□□□□ -1.76
HTT-211ENST00000513326 KLHL26Q53HC5 615 aa4.04□□□□□ -1.76
HTT-211ENST00000513326 SLC25A53Q5H9E4 307 aa4.04□□□□□ -1.76
HTT-211ENST00000513326 ZNF311Q5JNZ3 666 aa4.04□□□□□ -1.76
HTT-211ENST00000513326 KPRPQ5T749 579 aaPredicted RBP4.04□□□□□ -1.76
HTT-211ENST00000513326 DCAF12L2Q5VW00 463 aa4.04□□□□□ -1.76
HTT-211ENST00000513326 ACSM5Q6NUN0 579 aa4.04□□□□□ -1.76
HTT-211ENST00000513326 TMPPEQ6ZT21 453 aa4.04□□□□□ -1.76
HTT-211ENST00000513326 RAPH1Q70E73 1250 aa4.04□□□□□ -1.76
HTT-211ENST00000513326 IKBIPQ70UQ0 350 aa4.04□□□□□ -1.76
HTT-211ENST00000513326 RNF144BQ7Z419 303 aa4.04□□□□□ -1.76
HTT-211ENST00000513326 SZRD1Q7Z422 152 aa4.04□□□□□ -1.76
HTT-211ENST00000513326 ADGRG3Q86Y34 549 aa4.04□□□□□ -1.76
HTT-211ENST00000513326 ARMC8Q8IUR7 673 aa4.04□□□□□ -1.76
HTT-211ENST00000513326 WDFY1Q8IWB7 410 aa4.04□□□□□ -1.76
HTT-211ENST00000513326 PDIK1LQ8N165 341 aa4.04□□□□□ -1.76
HTT-211ENST00000513326 C17orf78Q8N4C9 275 aa4.04□□□□□ -1.76
HTT-211ENST00000513326 TMCO5AQ8N6Q1 288 aa4.04□□□□□ -1.76
HTT-211ENST00000513326 ZIC4Q8N9L1 334 aa4.04□□□□□ -1.76
HTT-211ENST00000513326 NUP37Q8NFH4 326 aa4.04□□□□□ -1.76
HTT-211ENST00000513326 OR1K1Q8NGR3 316 aa4.04□□□□□ -1.76
HTT-211ENST00000513326 MRAPQ8TCY5 172 aa4.04□□□□□ -1.76
HTT-211ENST00000513326 MAIP1Q8WWC4 291 aa4.04□□□□□ -1.76
HTT-211ENST00000513326 SELENOMQ8WWX9 145 aa4.04□□□□□ -1.76
HTT-211ENST00000513326 HDAC2Q92769 488 aaKnown RBP4.04□□□□□ -1.76
HTT-211ENST00000513326 BCL2L2Q92843 193 aaPredicted RBP4.04□□□□□ -1.76
HTT-211ENST00000513326 CDS1Q92903 461 aa4.04□□□□□ -1.76
HTT-211ENST00000513326 ATP6V1E2Q96A05 226 aa4.04□□□□□ -1.76
HTT-211ENST00000513326 PHF21BQ96EK2 531 aa4.04□□□□□ -1.76
HTT-211ENST00000513326 ALKBH3Q96Q83 286 aaPredicted RBP4.04□□□□□ -1.76
HTT-211ENST00000513326 TSPAN32Q96QS1 320 aa4.04□□□□□ -1.76
HTT-211ENST00000513326 KCNA7Q96RP8 456 aa4.04□□□□□ -1.76
HTT-211ENST00000513326 ZNF442Q9H7R0 627 aa4.04□□□□□ -1.76
HTT-211ENST00000513326 NTN4Q9HB63 628 aa4.04□□□□□ -1.76
HTT-211ENST00000513326 NMRAL1Q9HBL8 299 aa4.04□□□□□ -1.76
HTT-211ENST00000513326 LZTFL1Q9NQ48 299 aa4.04□□□□□ -1.76
HTT-211ENST00000513326 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.04□□□□□ -1.76
HTT-211ENST00000513326 UBQLN4Q9NRR5 601 aa4.04□□□□□ -1.76
HTT-211ENST00000513326 GIMAP4Q9NUV9 329 aa4.04□□□□□ -1.76
HTT-211ENST00000513326 PPP1R14DQ9NXH3 145 aa4.04□□□□□ -1.76
HTT-211ENST00000513326 C1RLQ9NZP8 487 aa4.04□□□□□ -1.76
HTT-211ENST00000513326 EMC3Q9P0I2 261 aa4.04□□□□□ -1.76
HTT-211ENST00000513326 CRNNQ9UBG3 495 aaPredicted RBP4.04□□□□□ -1.76
HTT-211ENST00000513326 MMP24Q9Y5R2 645 aa4.04□□□□□ -1.76
HTT-211ENST00000513326 FLVCR1Q9Y5Y0 555 aa4.04□□□□□ -1.76
HTT-211ENST00000513326 COX11Q9Y6N1 276 aa4.04□□□□□ -1.76
HTT-211ENST00000513326 PLXNB1O43157 2135 aa4.04□□□□□ -1.76
HTT-211ENST00000513326 RYR2Q92736 4967 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 A0A1W2PQD3 144 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 GAGE10A6NGK3 116 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 E7ESA3 106 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 NPIPB9F8W1W9 429 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 H0YL77 283 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 CLDN34H7C241 214 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 J3QLI3 93 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 TSPAN4O14817 238 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 UPK3AO75631 287 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 CRYAAP02489 173 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 C2P06681 752 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 RPS17P08708 135 aaKnown RBP4.03□□□□□ -1.76
HTT-211ENST00000513326 TFPIP10646 304 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 BCKDHAP12694 445 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 SELEP16581 610 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 CCNA2P20248 432 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 ACHEP22303 614 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 MPGP29372 298 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 PAFAH1B1P43034 410 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 MTNR1AP48039 350 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 P2RX1P51575 399 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 PSMD4P55036 377 aaKnown RBP4.03□□□□□ -1.76
HTT-211ENST00000513326 RAG2P55895 527 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 SEC61A1P61619 476 aaKnown RBP4.03□□□□□ -1.76
HTT-211ENST00000513326 C2orf80Q0P641 193 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 MERTKQ12866 999 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 NPRL3Q12980 569 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 SKP2Q13309 424 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 IL13RA2Q14627 380 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 PDK3Q15120 406 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 GGTA1PQ4G0N0 100 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 SYT14P1Q58G82 188 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 SPRNQ5BIV9 151 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 TECRLQ5HYJ1 363 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 OLFML2AQ68BL7 652 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 FAM71E1Q6IPT2 247 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 CDC73Q6P1J9 531 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 C3orf33Q6P1S2 294 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 KLHL24Q6TFL4 600 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 UGT2A3Q6UWM9 527 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 LRIG3Q6UXM1 1119 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 RBMS3Q6XE24 437 aaKnown RBP4.03□□□□□ -1.76
HTT-211ENST00000513326 ZNF782Q6ZMW2 699 aaPredicted RBP4.03□□□□□ -1.76
HTT-211ENST00000513326 C17orf107Q6ZR85 190 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 HMGN2P46Q86SG4 172 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 ZBED8Q8IZ13 594 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 ZNF614Q8N883 585 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 COX18Q8N8Q8 333 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 SYT14Q8NB59 555 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 OR5W2Q8NH69 310 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms