RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 ZNF730Q6ZMV8 503 aa14.01□□□□□ -0.17
PDLIM5-216ENST00000511767 MYPOPQ86VE0 399 aaPredicted RBP14.01□□□□□ -0.17
PDLIM5-216ENST00000511767 CDK20Q8IZL9 346 aa14.01□□□□□ -0.17
PDLIM5-216ENST00000511767 CIARTQ8N365 385 aaPredicted RBP14.01□□□□□ -0.17
PDLIM5-216ENST00000511767 SYT14Q8NB59 555 aa14.01□□□□□ -0.17
PDLIM5-216ENST00000511767 IL17RDQ8NFM7 739 aa14.01□□□□□ -0.17
PDLIM5-216ENST00000511767 FGFBP3Q8TAT2 258 aa14.01□□□□□ -0.17
PDLIM5-216ENST00000511767 GTPBP3Q969Y2 492 aaKnown RBP14.01□□□□□ -0.17
PDLIM5-216ENST00000511767 C18orf12Q96KH6 178 aa14.01□□□□□ -0.17
PDLIM5-216ENST00000511767 ZNF347Q96SE7 839 aa14.01□□□□□ -0.17
PDLIM5-216ENST00000511767 FUZQ9BT04 418 aa14.01□□□□□ -0.17
PDLIM5-216ENST00000511767 GSX1Q9H4S2 264 aaPredicted RBP14.01□□□□□ -0.17
PDLIM5-216ENST00000511767 NOX3Q9HBY0 568 aa14.01□□□□□ -0.17
PDLIM5-216ENST00000511767 NDE1Q9NXR1 346 aa14.01□□□□□ -0.17
PDLIM5-216ENST00000511767 ZFHX3Q15911 3703 aa14□□□□□ -0.17
PDLIM5-216ENST00000511767 DIRAS1O95057 198 aa14□□□□□ -0.17
PDLIM5-216ENST00000511767 PATE4P0C8F1 98 aa14□□□□□ -0.17
PDLIM5-216ENST00000511767 B4GALT1P15291 398 aa14□□□□□ -0.17
PDLIM5-216ENST00000511767 ZNF26P17031 533 aaPredicted RBP14□□□□□ -0.17
PDLIM5-216ENST00000511767 SLC9A3P48764 834 aa14□□□□□ -0.17
PDLIM5-216ENST00000511767 IDH3GP51553 393 aaPredicted RBP14□□□□□ -0.17
PDLIM5-216ENST00000511767 CTXN1P60606 82 aa14□□□□□ -0.17
PDLIM5-216ENST00000511767 RAB1AP62820 205 aa14□□□□□ -0.17
PDLIM5-216ENST00000511767 MXRA7P84157 204 aa14□□□□□ -0.17
PDLIM5-216ENST00000511767 TAF11Q15544 211 aa14□□□□□ -0.17
PDLIM5-216ENST00000511767 SWI5Q1ZZU3 235 aa14□□□□□ -0.17
PDLIM5-216ENST00000511767 ALG10Q5BKT4 473 aa14□□□□□ -0.17
PDLIM5-216ENST00000511767 RRM2BQ7LG56 351 aa14□□□□□ -0.17
PDLIM5-216ENST00000511767 OAFQ86UD1 273 aa14□□□□□ -0.17
PDLIM5-216ENST00000511767 SLC22A24Q8N4F4 322 aa14□□□□□ -0.17
PDLIM5-216ENST00000511767 OR4F15Q8NGB8 312 aa14□□□□□ -0.17
PDLIM5-216ENST00000511767 HDAC2Q92769 488 aaKnown RBP14□□□□□ -0.17
PDLIM5-216ENST00000511767 DHRS1Q96LJ7 313 aa14□□□□□ -0.17
PDLIM5-216ENST00000511767 NSMCE2Q96MF7 247 aa14□□□□□ -0.17
PDLIM5-216ENST00000511767 BDH2Q9BUT1 245 aa14□□□□□ -0.17
PDLIM5-216ENST00000511767 DENND2DQ9H6A0 471 aaPredicted RBP14□□□□□ -0.17
PDLIM5-216ENST00000511767 TMEM38BQ9NVV0 291 aa14□□□□□ -0.17
PDLIM5-216ENST00000511767 MAGEL2Q9UJ55 1249 aa14□□□□□ -0.17
PDLIM5-216ENST00000511767 GDF2Q9UK05 429 aaPredicted RBP14□□□□□ -0.17
PDLIM5-216ENST00000511767 hCG_2039718K7EN88 272 aa13.99□□□□□ -0.17
PDLIM5-216ENST00000511767 CDC42EP2O14613 210 aa13.99□□□□□ -0.17
PDLIM5-216ENST00000511767 ARPC2O15144 300 aa13.99□□□□□ -0.17
PDLIM5-216ENST00000511767 IGHV4-39P01824 125 aa13.99□□□□□ -0.17
PDLIM5-216ENST00000511767 OR8G3PP0DMU2 310 aa13.99□□□□□ -0.17
PDLIM5-216ENST00000511767 SAGP10523 405 aaPredicted RBP13.99□□□□□ -0.17
PDLIM5-216ENST00000511767 CD79AP11912 226 aa13.99□□□□□ -0.17
PDLIM5-216ENST00000511767 ZNF35P13682 527 aa13.99□□□□□ -0.17
PDLIM5-216ENST00000511767 CAPZA2P47755 286 aa13.99□□□□□ -0.17
PDLIM5-216ENST00000511767 DAP3P51398 398 aaKnown RBP13.99□□□□□ -0.17
PDLIM5-216ENST00000511767 CLRN1P58418 232 aa13.99□□□□□ -0.17
PDLIM5-216ENST00000511767 RPL27P61353 136 aaKnown RBP13.99□□□□□ -0.17
PDLIM5-216ENST00000511767 MYBPC1Q00872 1141 aa13.99□□□□□ -0.17
PDLIM5-216ENST00000511767 SEC23BQ15437 767 aa13.99□□□□□ -0.17
PDLIM5-216ENST00000511767 DNM1P46Q6ZS02 220 aa13.99□□□□□ -0.17
PDLIM5-216ENST00000511767 RINLQ6ZS11 566 aa13.99□□□□□ -0.17
PDLIM5-216ENST00000511767 KCNK17Q96T54 332 aa13.99□□□□□ -0.17
PDLIM5-216ENST00000511767 STX18Q9P2W9 335 aaKnown RBP13.99□□□□□ -0.17
PDLIM5-216ENST00000511767 ARFGEF3Q5TH69 2177 aa13.99□□□□□ -0.17
PDLIM5-216ENST00000511767 NIPBLQ6KC79 2804 aaeCLIP13.98□□□□□ -0.17
PDLIM5-216ENST00000511767 TRAV27A0A087WT01 109 aa13.98□□□□□ -0.17
PDLIM5-216ENST00000511767 IGHV2OR16-5A0A0B4J2B6 119 aa13.98□□□□□ -0.17
PDLIM5-216ENST00000511767 TRBV4-1A0A0J9YWV2 114 aa13.98□□□□□ -0.17
PDLIM5-216ENST00000511767 TRIM64A6NGJ6 449 aa13.98□□□□□ -0.17
PDLIM5-216ENST00000511767 TRIM64BA6NI03 449 aa13.98□□□□□ -0.17
PDLIM5-216ENST00000511767 MCIDASD6RGH6 385 aa13.98□□□□□ -0.17
PDLIM5-216ENST00000511767 MGRN1O60291 552 aa13.98□□□□□ -0.17
PDLIM5-216ENST00000511767 IGHMP01871 453 aa13.98□□□□□ -0.17
PDLIM5-216ENST00000511767 INHBBP09529 407 aa13.98□□□□□ -0.17
PDLIM5-216ENST00000511767 ZNF14P17017 642 aaPredicted RBP13.98□□□□□ -0.17
PDLIM5-216ENST00000511767 ITGA2P17301 1181 aa13.98□□□□□ -0.17
PDLIM5-216ENST00000511767 CALB2P22676 271 aa13.98□□□□□ -0.17
PDLIM5-216ENST00000511767 SERPINF1P36955 418 aa13.98□□□□□ -0.17
PDLIM5-216ENST00000511767 OMPP47874 163 aa13.98□□□□□ -0.17
PDLIM5-216ENST00000511767 GIPRP48546 466 aa13.98□□□□□ -0.17
PDLIM5-216ENST00000511767 MS4A2Q01362 244 aa13.98□□□□□ -0.17
PDLIM5-216ENST00000511767 GSG1Q2KHT4 349 aa13.98□□□□□ -0.17
PDLIM5-216ENST00000511767 NRN1LQ496H8 165 aa13.98□□□□□ -0.17
PDLIM5-216ENST00000511767 ZBED5Q49AG3 693 aa13.98□□□□□ -0.17
PDLIM5-216ENST00000511767 C10orf128Q5T292 105 aa13.98□□□□□ -0.17
PDLIM5-216ENST00000511767 SLC25A47Q6Q0C1 308 aa13.98□□□□□ -0.17
PDLIM5-216ENST00000511767 OR13C2Q8NGS9 318 aa13.98□□□□□ -0.17
PDLIM5-216ENST00000511767 MS4A3Q96HJ5 214 aa13.98□□□□□ -0.17
PDLIM5-216ENST00000511767 RBP7Q96R05 134 aa13.98□□□□□ -0.17
PDLIM5-216ENST00000511767 SMR3AQ99954 134 aa13.98□□□□□ -0.17
PDLIM5-216ENST00000511767 SH3GL3Q99963 347 aa13.98□□□□□ -0.17
PDLIM5-216ENST00000511767 KCNS3Q9BQ31 491 aa13.98□□□□□ -0.17
PDLIM5-216ENST00000511767 CACNG6Q9BXT2 260 aa13.98□□□□□ -0.17
PDLIM5-216ENST00000511767 IL1RAPQ9NPH3 570 aa13.98□□□□□ -0.17
PDLIM5-216ENST00000511767 CA10Q9NS85 328 aa13.98□□□□□ -0.17
PDLIM5-216ENST00000511767 TAS2R1Q9NYW7 299 aa13.98□□□□□ -0.17
PDLIM5-216ENST00000511767 ACTR3BQ9P1U1 418 aa13.98□□□□□ -0.17
PDLIM5-216ENST00000511767 IGKV1D-43A0A0B4J1Z2 117 aa13.97□□□□□ -0.17
PDLIM5-216ENST00000511767 H7C1Q1 480 aa13.97□□□□□ -0.17
PDLIM5-216ENST00000511767 SERPINA5P05154 406 aa13.97□□□□□ -0.17
PDLIM5-216ENST00000511767 NR4A1P22736 598 aa13.97□□□□□ -0.17
PDLIM5-216ENST00000511767 THBS4P35443 961 aa13.97□□□□□ -0.17
PDLIM5-216ENST00000511767 ACVR1BP36896 505 aa13.97□□□□□ -0.17
PDLIM5-216ENST00000511767 GPR4P46093 362 aa13.97□□□□□ -0.17
PDLIM5-216ENST00000511767 HMGA2P52926 109 aa13.97□□□□□ -0.17
PDLIM5-216ENST00000511767 CHRNB3Q05901 458 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms