RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 ADPRMQ3LIE5 342 aa5.04□□□□□ -1.6
USP53-206ENST00000510737 SLC25A30Q5SVS4 291 aa5.04□□□□□ -1.6
USP53-206ENST00000510737 KPRPQ5T749 579 aaPredicted RBP5.04□□□□□ -1.6
USP53-206ENST00000510737 ASPHD2Q6ICH7 369 aa5.04□□□□□ -1.6
USP53-206ENST00000510737 ZNF544Q6NX49 715 aa5.04□□□□□ -1.6
USP53-206ENST00000510737 LEG1Q6P5S2 330 aa5.04□□□□□ -1.6
USP53-206ENST00000510737 SHQ1Q6PI26 577 aaKnown RBP5.04□□□□□ -1.6
USP53-206ENST00000510737 CFAP77Q6ZQR2 320 aa5.04□□□□□ -1.6
USP53-206ENST00000510737 NUFIP2Q7Z417 695 aaKnown RBP5.04□□□□□ -1.6
USP53-206ENST00000510737 ZNF615Q8N8J6 731 aa5.04□□□□□ -1.6
USP53-206ENST00000510737 SLC5A11Q8WWX8 675 aa5.04□□□□□ -1.6
USP53-206ENST00000510737 C22orf15Q8WYQ4 148 aa5.04□□□□□ -1.6
USP53-206ENST00000510737 C1orf147Q96MC9 270 aaPredicted RBP5.04□□□□□ -1.6
USP53-206ENST00000510737 TSNARE1Q96NA8 513 aa5.04□□□□□ -1.6
USP53-206ENST00000510737 OSBPL11Q9BXB4 747 aa5.04□□□□□ -1.6
USP53-206ENST00000510737 RSPO3Q9BXY4 272 aaPredicted RBP5.04□□□□□ -1.6
USP53-206ENST00000510737 HSD3B7Q9H2F3 369 aa5.04□□□□□ -1.6
USP53-206ENST00000510737 LPAR2Q9HBW0 351 aa5.04□□□□□ -1.6
USP53-206ENST00000510737 TREX1Q9NSU2 369 aa5.04□□□□□ -1.6
USP53-206ENST00000510737 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.04□□□□□ -1.6
USP53-206ENST00000510737 CORO1CQ9ULV4 474 aaPredicted RBP5.04□□□□□ -1.6
USP53-206ENST00000510737 DHRS7Q9Y394 339 aa5.04□□□□□ -1.6
USP53-206ENST00000510737 SPACA6W5XKT8 324 aa5.04□□□□□ -1.6
USP53-206ENST00000510737 UQCRHLA0A096LP55 91 aa5.03□□□□□ -1.6
USP53-206ENST00000510737 SYCE3A1L190 88 aa5.03□□□□□ -1.6
USP53-206ENST00000510737 E5RI56 91 aa5.03□□□□□ -1.6
USP53-206ENST00000510737 PSMD3O43242 534 aa5.03□□□□□ -1.6
USP53-206ENST00000510737 UGT2B11O75310 529 aa5.03□□□□□ -1.6
USP53-206ENST00000510737 NMBRP28336 390 aa5.03□□□□□ -1.6
USP53-206ENST00000510737 TMED10P49755 219 aaKnown RBP5.03□□□□□ -1.6
USP53-206ENST00000510737 RCN2Q14257 317 aa5.03□□□□□ -1.6
USP53-206ENST00000510737 PPA1Q15181 289 aa5.03□□□□□ -1.6
USP53-206ENST00000510737 TBCEQ15813 527 aaPredicted RBP5.03□□□□□ -1.6
USP53-206ENST00000510737 FAM189A2Q15884 450 aa5.03□□□□□ -1.6
USP53-206ENST00000510737 SGCBQ16585 318 aa5.03□□□□□ -1.6
USP53-206ENST00000510737 TTLL9Q3SXZ7 439 aa5.03□□□□□ -1.6
USP53-206ENST00000510737 GRTP1Q5TC63 336 aa5.03□□□□□ -1.6
USP53-206ENST00000510737 ACSM2BQ68CK6 577 aa5.03□□□□□ -1.6
USP53-206ENST00000510737 DUPD1Q68J44 220 aa5.03□□□□□ -1.6
USP53-206ENST00000510737 CASC4Q6P4E1 433 aa5.03□□□□□ -1.6
USP53-206ENST00000510737 UGT2A3Q6UWM9 527 aa5.03□□□□□ -1.6
USP53-206ENST00000510737 CENPUQ71F23 418 aa5.03□□□□□ -1.6
USP53-206ENST00000510737 BHLHA15Q7RTS1 189 aaPredicted RBP5.03□□□□□ -1.6
USP53-206ENST00000510737 LINC00523Q86TU6 105 aa5.03□□□□□ -1.6
USP53-206ENST00000510737 CPNE9Q8IYJ1 553 aa5.03□□□□□ -1.6
USP53-206ENST00000510737 SYT14Q8NB59 555 aa5.03□□□□□ -1.6
USP53-206ENST00000510737 BBOF1Q8ND07 529 aa5.03□□□□□ -1.6
USP53-206ENST00000510737 OR2L5Q8NG80 312 aa5.03□□□□□ -1.6
USP53-206ENST00000510737 MRAPQ8TCY5 172 aa5.03□□□□□ -1.6
USP53-206ENST00000510737 RIT1Q92963 219 aa5.03□□□□□ -1.6
USP53-206ENST00000510737 PEX13Q92968 403 aa5.03□□□□□ -1.6
USP53-206ENST00000510737 CITED1Q99966 193 aa5.03□□□□□ -1.6
USP53-206ENST00000510737 AIF1LQ9BQI0 150 aa5.03□□□□□ -1.6
USP53-206ENST00000510737 INPP5KQ9BT40 448 aa5.03□□□□□ -1.6
USP53-206ENST00000510737 POTEKPQ9BYX7 375 aa5.03□□□□□ -1.6
USP53-206ENST00000510737 PRRG4Q9BZD6 226 aa5.03□□□□□ -1.6
USP53-206ENST00000510737 NXF5Q9H1B4 397 aaKnown RBP5.03□□□□□ -1.6
USP53-206ENST00000510737 NTN4Q9HB63 628 aa5.03□□□□□ -1.6
USP53-206ENST00000510737 PARVBQ9HBI1 364 aa5.03□□□□□ -1.6
USP53-206ENST00000510737 LYRM4Q9HD34 91 aa5.03□□□□□ -1.6
USP53-206ENST00000510737 MYOZ1Q9NP98 299 aaPredicted RBP5.03□□□□□ -1.6
USP53-206ENST00000510737 SDR39U1Q9NRG7 319 aaPredicted RBP5.03□□□□□ -1.6
USP53-206ENST00000510737 KLRF1Q9NZS2 232 aa5.03□□□□□ -1.6
USP53-206ENST00000510737 FKBP7Q9Y680 259 aa5.03□□□□□ -1.6
USP53-206ENST00000510737 BZW2Q9Y6E2 419 aaKnown RBP5.03□□□□□ -1.6
USP53-206ENST00000510737 ELOVL7A1L3X0 281 aa5.02□□□□□ -1.61
USP53-206ENST00000510737 BTNL10A8MVZ5 291 aa5.02□□□□□ -1.61
USP53-206ENST00000510737 SRRM5B3KS81 715 aa5.02□□□□□ -1.61
USP53-206ENST00000510737 RTCAO00442 366 aaKnown RBP5.02□□□□□ -1.61
USP53-206ENST00000510737 PRKRAO75569 313 aaKnown RBP5.02□□□□□ -1.61
USP53-206ENST00000510737 NXPH2O95156 264 aa5.02□□□□□ -1.61
USP53-206ENST00000510737 VAPBO95292 243 aa5.02□□□□□ -1.61
USP53-206ENST00000510737 SERPING1P05155 500 aa5.02□□□□□ -1.61
USP53-206ENST00000510737 MSMBP08118 114 aa5.02□□□□□ -1.61
USP53-206ENST00000510737 CT62P0C5K7 136 aa5.02□□□□□ -1.61
USP53-206ENST00000510737 PRG2P13727 222 aa5.02□□□□□ -1.61
USP53-206ENST00000510737 ADRA2CP18825 462 aa5.02□□□□□ -1.61
USP53-206ENST00000510737 PGCP20142 388 aa5.02□□□□□ -1.61
USP53-206ENST00000510737 OMGP23515 440 aa5.02□□□□□ -1.61
USP53-206ENST00000510737 ATP5A1P25705 553 aaKnown RBP5.02□□□□□ -1.61
USP53-206ENST00000510737 AGTR1P30556 359 aa5.02□□□□□ -1.61
USP53-206ENST00000510737 MARCKSL1P49006 195 aa5.02□□□□□ -1.61
USP53-206ENST00000510737 DSCR4P56555 118 aaPredicted RBP5.02□□□□□ -1.61
USP53-206ENST00000510737 RPS3AP61247 264 aaKnown RBP5.02□□□□□ -1.61
USP53-206ENST00000510737 CRADDP78560 199 aa5.02□□□□□ -1.61
USP53-206ENST00000510737 BIKQ13323 160 aa5.02□□□□□ -1.61
USP53-206ENST00000510737 MED22Q15528 200 aa5.02□□□□□ -1.61
USP53-206ENST00000510737 ZNHIT3Q15649 155 aaPredicted RBP5.02□□□□□ -1.61
USP53-206ENST00000510737 STK11Q15831 433 aa5.02□□□□□ -1.61
USP53-206ENST00000510737 ADNP2Q6IQ32 1131 aa5.02□□□□□ -1.61
USP53-206ENST00000510737 CES3Q6UWW8 571 aa5.02□□□□□ -1.61
USP53-206ENST00000510737 TFAP2EQ6VUC0 442 aa5.02□□□□□ -1.61
USP53-206ENST00000510737 TBC1D1Q86TI0 1168 aaPredicted RBP5.02□□□□□ -1.61
USP53-206ENST00000510737 HOGA1Q86XE5 327 aa5.02□□□□□ -1.61
USP53-206ENST00000510737 ZNF584Q8IVC4 421 aa5.02□□□□□ -1.61
USP53-206ENST00000510737 ST13P4Q8IZP2 240 aaPredicted RBP5.02□□□□□ -1.61
USP53-206ENST00000510737 BPIFB2Q8N4F0 458 aa5.02□□□□□ -1.61
USP53-206ENST00000510737 KIR3DL3Q8N743 410 aa5.02□□□□□ -1.61
USP53-206ENST00000510737 SIGLECL1Q8N7X8 197 aa5.02□□□□□ -1.61
USP53-206ENST00000510737 ACOT4Q8N9L9 421 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms