RNA–Protein interactions for RNA: ENST00000507355.5

POLR2J3-212, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-212ENST00000507355 BEND6Q5SZJ8 279 aaPredicted RBP11.48□□□□□ -0.57
POLR2J3-212ENST00000507355 REP15Q6BDI9 236 aa11.48□□□□□ -0.57
POLR2J3-212ENST00000507355 TTC33Q6PID6 262 aaPredicted RBP11.48□□□□□ -0.57
POLR2J3-212ENST00000507355 LRFN4Q6PJG9 635 aa11.48□□□□□ -0.57
POLR2J3-212ENST00000507355 RBM45Q8IUH3 476 aaKnown RBP11.48□□□□□ -0.57
POLR2J3-212ENST00000507355 LRRC17Q8N6Y2 441 aa11.48□□□□□ -0.57
POLR2J3-212ENST00000507355 GPR32P1Q8NGA4 272 aa11.48□□□□□ -0.57
POLR2J3-212ENST00000507355 OR6T1Q8NGN1 323 aa11.48□□□□□ -0.57
POLR2J3-212ENST00000507355 FAM216AQ8WUB2 273 aa11.48□□□□□ -0.57
POLR2J3-212ENST00000507355 SH3GL3Q99963 347 aa11.48□□□□□ -0.57
POLR2J3-212ENST00000507355 CPPED1Q9BRF8 314 aaPredicted RBP11.48□□□□□ -0.57
POLR2J3-212ENST00000507355 ZNF275Q9NSD4 429 aaPredicted RBP11.48□□□□□ -0.57
POLR2J3-212ENST00000507355 HIF1ANQ9NWT6 349 aa11.48□□□□□ -0.57
POLR2J3-212ENST00000507355 TREM2Q9NZC2 230 aa11.48□□□□□ -0.57
POLR2J3-212ENST00000507355 SLC7A8Q9UHI5 535 aa11.48□□□□□ -0.57
POLR2J3-212ENST00000507355 FBXL3Q9UKT7 428 aa11.48□□□□□ -0.57
POLR2J3-212ENST00000507355 TRIM77I1YAP6 450 aa11.47□□□□□ -0.57
POLR2J3-212ENST00000507355 DHHO43323 396 aa11.47□□□□□ -0.57
POLR2J3-212ENST00000507355 RNF13O43567 381 aa11.47□□□□□ -0.57
POLR2J3-212ENST00000507355 ERLIN1O75477 346 aa11.47□□□□□ -0.57
POLR2J3-212ENST00000507355 LYPD3O95274 346 aa11.47□□□□□ -0.57
POLR2J3-212ENST00000507355 CLPTM1O96005 669 aa11.47□□□□□ -0.57
POLR2J3-212ENST00000507355 CCL2P13500 99 aa11.47□□□□□ -0.57
POLR2J3-212ENST00000507355 RBBP4Q09028 425 aa11.47□□□□□ -0.57
POLR2J3-212ENST00000507355 SCGB2A2Q13296 93 aa11.47□□□□□ -0.57
POLR2J3-212ENST00000507355 SELPLGQ14242 412 aa11.47□□□□□ -0.57
POLR2J3-212ENST00000507355 MELKQ14680 651 aa11.47□□□□□ -0.57
POLR2J3-212ENST00000507355 ZNF74Q16587 644 aa11.47□□□□□ -0.57
POLR2J3-212ENST00000507355 AGBL2Q5U5Z8 902 aa11.47□□□□□ -0.57
POLR2J3-212ENST00000507355 RGS7BPQ6MZT1 257 aaPredicted RBP11.47□□□□□ -0.57
POLR2J3-212ENST00000507355 C11orf65Q8NCR3 313 aa11.47□□□□□ -0.57
POLR2J3-212ENST00000507355 OR4D11Q8NGI4 311 aa11.47□□□□□ -0.57
POLR2J3-212ENST00000507355 VANGL1Q8TAA9 524 aaPredicted RBP11.47□□□□□ -0.57
POLR2J3-212ENST00000507355 ADAMTS16Q8TE57 1224 aa11.47□□□□□ -0.57
POLR2J3-212ENST00000507355 ZNF566Q969W8 418 aa11.47□□□□□ -0.57
POLR2J3-212ENST00000507355 SLC25A44Q96H78 314 aaPredicted RBP11.47□□□□□ -0.57
POLR2J3-212ENST00000507355 RACGAP1Q9H0H5 632 aa11.47□□□□□ -0.57
POLR2J3-212ENST00000507355 RNF121Q9H920 327 aa11.47□□□□□ -0.57
POLR2J3-212ENST00000507355 NANSQ9NR45 359 aa11.47□□□□□ -0.57
POLR2J3-212ENST00000507355 TMEM38BQ9NVV0 291 aa11.47□□□□□ -0.57
POLR2J3-212ENST00000507355 TAAR3PQ9P1P4 343 aa11.47□□□□□ -0.57
POLR2J3-212ENST00000507355 LEF1Q9UJU2 399 aaPredicted RBP11.47□□□□□ -0.57
POLR2J3-212ENST00000507355 ZNF346Q9UL40 294 aaKnown RBP11.47□□□□□ -0.57
POLR2J3-212ENST00000507355 PCDHB10Q9UN67 800 aa11.47□□□□□ -0.57
POLR2J3-212ENST00000507355 A0A1W2PPW3 197 aa11.46□□□□□ -0.57
POLR2J3-212ENST00000507355 PPIHO43447 177 aaKnown RBP11.46□□□□□ -0.57
POLR2J3-212ENST00000507355 NCR1O76036 304 aa11.46□□□□□ -0.57
POLR2J3-212ENST00000507355 HIST1H2ABP04908 130 aa11.46□□□□□ -0.57
POLR2J3-212ENST00000507355 QDPRP09417 244 aa11.46□□□□□ -0.57
POLR2J3-212ENST00000507355 FAM157BP0CG42 384 aa11.46□□□□□ -0.57
POLR2J3-212ENST00000507355 SAGP10523 405 aaPredicted RBP11.46□□□□□ -0.57
POLR2J3-212ENST00000507355 MAGEB1P43366 347 aa11.46□□□□□ -0.57
POLR2J3-212ENST00000507355 MTPNP58546 118 aa11.46□□□□□ -0.57
POLR2J3-212ENST00000507355 HILS1P60008 231 aa11.46□□□□□ -0.57
POLR2J3-212ENST00000507355 LMO4P61968 165 aa11.46□□□□□ -0.57
POLR2J3-212ENST00000507355 DEFA6Q01524 100 aa11.46□□□□□ -0.57
POLR2J3-212ENST00000507355 CYP51A1Q16850 503 aa11.46□□□□□ -0.57
POLR2J3-212ENST00000507355 AWAT1Q58HT5 328 aa11.46□□□□□ -0.57
POLR2J3-212ENST00000507355 PRR31Q5SQ13 230 aa11.46□□□□□ -0.57
POLR2J3-212ENST00000507355 DEF8Q6ZN54 512 aa11.46□□□□□ -0.57
POLR2J3-212ENST00000507355 HIST3H2AQ7L7L0 130 aa11.46□□□□□ -0.57
POLR2J3-212ENST00000507355 TSPYL5Q86VY4 417 aaPredicted RBP11.46□□□□□ -0.57
POLR2J3-212ENST00000507355 SLC30A7Q8NEW0 376 aa11.46□□□□□ -0.57
POLR2J3-212ENST00000507355 HIST1H2ACQ93077 130 aa11.46□□□□□ -0.57
POLR2J3-212ENST00000507355 TMEM186Q96B77 213 aa11.46□□□□□ -0.57
POLR2J3-212ENST00000507355 CGREF1Q99674 301 aa11.46□□□□□ -0.57
POLR2J3-212ENST00000507355 RBM4Q9BWF3 364 aaKnown RBP11.46□□□□□ -0.57
POLR2J3-212ENST00000507355 OR51B6Q9H340 312 aa11.46□□□□□ -0.57
POLR2J3-212ENST00000507355 ZNF385DQ9H6B1 395 aa11.46□□□□□ -0.57
POLR2J3-212ENST00000507355 SLC7A7Q9UM01 511 aa11.46□□□□□ -0.57
POLR2J3-212ENST00000507355 NDUFAF1Q9Y375 327 aa11.46□□□□□ -0.57
POLR2J3-212ENST00000507355 GRIP1Q9Y3R0 1128 aa11.46□□□□□ -0.57
POLR2J3-212ENST00000507355 SLC22A23A1A5C7 686 aa11.45□□□□□ -0.58
POLR2J3-212ENST00000507355 TRAPPC13A5PLN9 417 aa11.45□□□□□ -0.58
POLR2J3-212ENST00000507355 BLOC1S5-TXNDC5H3BN57 136 aa11.45□□□□□ -0.58
POLR2J3-212ENST00000507355 KPNA4O00629 521 aaPredicted RBP11.45□□□□□ -0.58
POLR2J3-212ENST00000507355 ENTPD5O75356 428 aa11.45□□□□□ -0.58
POLR2J3-212ENST00000507355 FARS2O95363 451 aaKnown RBP11.45□□□□□ -0.58
POLR2J3-212ENST00000507355 BCL10O95999 233 aa11.45□□□□□ -0.58
POLR2J3-212ENST00000507355 TFP02787 698 aa11.45□□□□□ -0.58
POLR2J3-212ENST00000507355 MSMBP08118 114 aa11.45□□□□□ -0.58
POLR2J3-212ENST00000507355 PGA4P0DJD7 388 aa11.45□□□□□ -0.58
POLR2J3-212ENST00000507355 PGA3P0DJD8 388 aa11.45□□□□□ -0.58
POLR2J3-212ENST00000507355 GAAP10253 952 aa11.45□□□□□ -0.58
POLR2J3-212ENST00000507355 UMPSP11172 480 aa11.45□□□□□ -0.58
POLR2J3-212ENST00000507355 EPHA1P21709 976 aa11.45□□□□□ -0.58
POLR2J3-212ENST00000507355 SELENOVP59797 346 aa11.45□□□□□ -0.58
POLR2J3-212ENST00000507355 MRPS11P82912 194 aaKnown RBP11.45□□□□□ -0.58
POLR2J3-212ENST00000507355 MYBPC1Q00872 1141 aa11.45□□□□□ -0.58
POLR2J3-212ENST00000507355 NKPD1Q17RQ9 610 aa11.45□□□□□ -0.58
POLR2J3-212ENST00000507355 TMEM53Q6P2H8 277 aa11.45□□□□□ -0.58
POLR2J3-212ENST00000507355 DHDDSQ86SQ9 333 aa11.45□□□□□ -0.58
POLR2J3-212ENST00000507355 PATL1Q86TB9 770 aaKnown RBP11.45□□□□□ -0.58
POLR2J3-212ENST00000507355 PAQR4Q8N4S7 273 aaPredicted RBP11.45□□□□□ -0.58
POLR2J3-212ENST00000507355 DPP10Q8N608 796 aa11.45□□□□□ -0.58
POLR2J3-212ENST00000507355 OR4K5Q8NGD3 323 aa11.45□□□□□ -0.58
POLR2J3-212ENST00000507355 SYNPRQ8TBG9 265 aa11.45□□□□□ -0.58
POLR2J3-212ENST00000507355 SLC26A7Q8TE54 656 aa11.45□□□□□ -0.58
POLR2J3-212ENST00000507355 MCHR2Q969V1 340 aa11.45□□□□□ -0.58
POLR2J3-212ENST00000507355 LRRC37BQ96QE4 947 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms