RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 UFD1Q92890 307 aa4.43□□□□□ -1.7
CHD1-204ENST00000505982 FGF11Q92914 225 aa4.43□□□□□ -1.7
CHD1-204ENST00000505982 ITFG2Q969R8 447 aa4.43□□□□□ -1.7
CHD1-204ENST00000505982 ANKRD9Q96BM1 317 aaPredicted RBP4.43□□□□□ -1.7
CHD1-204ENST00000505982 PAIP2Q9BPZ3 127 aaKnown RBP4.43□□□□□ -1.7
CHD1-204ENST00000505982 TRIM4Q9C037 500 aa4.43□□□□□ -1.7
CHD1-204ENST00000505982 VCXQ9H320 206 aa4.43□□□□□ -1.7
CHD1-204ENST00000505982 VPS37BQ9H9H4 285 aa4.43□□□□□ -1.7
CHD1-204ENST00000505982 NMRAL1Q9HBL8 299 aa4.43□□□□□ -1.7
CHD1-204ENST00000505982 RPS10P5Q9NQ39 176 aa4.43□□□□□ -1.7
CHD1-204ENST00000505982 HOXC10Q9NYD6 342 aa4.43□□□□□ -1.7
CHD1-204ENST00000505982 Q9UF83 564 aa4.43□□□□□ -1.7
CHD1-204ENST00000505982 CLEC4EQ9ULY5 219 aa4.43□□□□□ -1.7
CHD1-204ENST00000505982 STAP1Q9ULZ2 295 aa4.43□□□□□ -1.7
CHD1-204ENST00000505982 CA5BQ9Y2D0 317 aa4.43□□□□□ -1.7
CHD1-204ENST00000505982 STK38LQ9Y2H1 464 aa4.43□□□□□ -1.7
CHD1-204ENST00000505982 TNS3Q68CZ2 1445 aa4.43□□□□□ -1.7
CHD1-204ENST00000505982 PHLPP1O60346 1717 aa4.43□□□□□ -1.7
CHD1-204ENST00000505982 KIAA1551Q9HCM1 1747 aa4.43□□□□□ -1.7
CHD1-204ENST00000505982 KCPQ6ZWJ8 1503 aa4.42□□□□□ -1.7
CHD1-204ENST00000505982 NUP98P52948 1817 aa4.42□□□□□ -1.7
CHD1-204ENST00000505982 SMIM23A6NLE4 172 aa4.42□□□□□ -1.7
CHD1-204ENST00000505982 DCTN6O00399 190 aa4.42□□□□□ -1.7
CHD1-204ENST00000505982 LAD1O00515 517 aa4.42□□□□□ -1.7
CHD1-204ENST00000505982 TNFSF11O14788 317 aa4.42□□□□□ -1.7
CHD1-204ENST00000505982 TOM1O60784 492 aa4.42□□□□□ -1.7
CHD1-204ENST00000505982 SERF1AO75920 110 aa4.42□□□□□ -1.7
CHD1-204ENST00000505982 AGTP01019 485 aa4.42□□□□□ -1.7
CHD1-204ENST00000505982 ATP1B2P14415 290 aaPredicted RBP4.42□□□□□ -1.7
CHD1-204ENST00000505982 CD1CP29017 333 aa4.42□□□□□ -1.7
CHD1-204ENST00000505982 ALDH3A1P30838 453 aa4.42□□□□□ -1.7
CHD1-204ENST00000505982 SHMT2P34897 504 aa4.42□□□□□ -1.7
CHD1-204ENST00000505982 PCK1P35558 622 aa4.42□□□□□ -1.7
CHD1-204ENST00000505982 DSCR10P59022 87 aa4.42□□□□□ -1.7
CHD1-204ENST00000505982 NCALDP61601 193 aa4.42□□□□□ -1.7
CHD1-204ENST00000505982 BEX3Q00994 111 aa4.42□□□□□ -1.7
CHD1-204ENST00000505982 LRRC63Q05C16 580 aa4.42□□□□□ -1.7
CHD1-204ENST00000505982 DYNC1I2Q13409 638 aaKnown RBP4.42□□□□□ -1.7
CHD1-204ENST00000505982 CUL2Q13617 745 aa4.42□□□□□ -1.7
CHD1-204ENST00000505982 VGLL4Q14135 290 aa4.42□□□□□ -1.7
CHD1-204ENST00000505982 KIAA0040Q15053 153 aa4.42□□□□□ -1.7
CHD1-204ENST00000505982 OXA1LQ15070 435 aa4.42□□□□□ -1.7
CHD1-204ENST00000505982 UAP1Q16222 522 aaPredicted RBP4.42□□□□□ -1.7
CHD1-204ENST00000505982 NSUN5P1Q3KNT7 163 aa4.42□□□□□ -1.7
CHD1-204ENST00000505982 LCE3CQ5T5A8 94 aa4.42□□□□□ -1.7
CHD1-204ENST00000505982 WDR74Q6RFH5 385 aaPredicted RBP4.42□□□□□ -1.7
CHD1-204ENST00000505982 GDPD3Q7L5L3 318 aa4.42□□□□□ -1.7
CHD1-204ENST00000505982 FBXO16Q8IX29 292 aaPredicted RBP4.42□□□□□ -1.7
CHD1-204ENST00000505982 ZBED8Q8IZ13 594 aa4.42□□□□□ -1.7
CHD1-204ENST00000505982 SYCE1Q8N0S2 351 aa4.42□□□□□ -1.7
CHD1-204ENST00000505982 MRAPQ8TCY5 172 aa4.42□□□□□ -1.7
CHD1-204ENST00000505982 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.42□□□□□ -1.7
CHD1-204ENST00000505982 TLCD1Q96CP7 247 aa4.42□□□□□ -1.7
CHD1-204ENST00000505982 RASD2Q96D21 266 aa4.42□□□□□ -1.7
CHD1-204ENST00000505982 PPA2Q9H2U2 334 aa4.42□□□□□ -1.7
CHD1-204ENST00000505982 SLC2A8Q9NY64 477 aa4.42□□□□□ -1.7
CHD1-204ENST00000505982 TREM2Q9NZC2 230 aa4.42□□□□□ -1.7
CHD1-204ENST00000505982 SPATA7Q9P0W8 599 aa4.42□□□□□ -1.7
CHD1-204ENST00000505982 MTRF1LQ9UGC7 380 aaKnown RBP4.42□□□□□ -1.7
CHD1-204ENST00000505982 VSIG4Q9Y279 399 aa4.42□□□□□ -1.7
CHD1-204ENST00000505982 WNK3Q9BYP7 1800 aa4.42□□□□□ -1.7
CHD1-204ENST00000505982 COL18A1P39060 1754 aa4.41□□□□□ -1.7
CHD1-204ENST00000505982 ZNF716A6NP11 495 aa4.41□□□□□ -1.7
CHD1-204ENST00000505982 BTNL10A8MVZ5 291 aa4.41□□□□□ -1.7
CHD1-204ENST00000505982 E7ENQ6 273 aa4.41□□□□□ -1.7
CHD1-204ENST00000505982 K7N7A8 449 aa4.41□□□□□ -1.7
CHD1-204ENST00000505982 PHOX2AO14813 284 aa4.41□□□□□ -1.7
CHD1-204ENST00000505982 KLRC4O43908 158 aa4.41□□□□□ -1.7
CHD1-204ENST00000505982 PLEKHA8P1O95397 391 aa4.41□□□□□ -1.7
CHD1-204ENST00000505982 STAMBPO95630 424 aa4.41□□□□□ -1.7
CHD1-204ENST00000505982 NDUFB10O96000 172 aa4.41□□□□□ -1.7
CHD1-204ENST00000505982 PCCAP05165 728 aaPredicted RBP4.41□□□□□ -1.7
CHD1-204ENST00000505982 ZNF735P0CB33 412 aa4.41□□□□□ -1.7
CHD1-204ENST00000505982 PSMB1P20618 241 aaKnown RBP4.41□□□□□ -1.7
CHD1-204ENST00000505982 IL12AP29459 219 aa4.41□□□□□ -1.7
CHD1-204ENST00000505982 AQP1P29972 269 aa4.41□□□□□ -1.7
CHD1-204ENST00000505982 RFC4P35249 363 aa4.41□□□□□ -1.7
CHD1-204ENST00000505982 PTGDSP41222 190 aa4.41□□□□□ -1.7
CHD1-204ENST00000505982 DIO3P55073 304 aa4.41□□□□□ -1.7
CHD1-204ENST00000505982 SH3BGRP55822 239 aaPredicted RBP4.41□□□□□ -1.7
CHD1-204ENST00000505982 RPS14P62263 151 aaKnown RBP4.41□□□□□ -1.7
CHD1-204ENST00000505982 MRPL28Q13084 256 aaKnown RBP4.41□□□□□ -1.7
CHD1-204ENST00000505982 UTF1Q5T230 341 aa4.41□□□□□ -1.7
CHD1-204ENST00000505982 PEX26Q7Z412 305 aa4.41□□□□□ -1.7
CHD1-204ENST00000505982 PPP1R27Q86WC6 154 aa4.41□□□□□ -1.7
CHD1-204ENST00000505982 VRK2Q86Y07 508 aa4.41□□□□□ -1.7
CHD1-204ENST00000505982 ZNF100Q8IYN0 542 aa4.41□□□□□ -1.7
CHD1-204ENST00000505982 LRRC34Q8IZ02 419 aa4.41□□□□□ -1.7
CHD1-204ENST00000505982 BLIDQ8IZY5 108 aa4.41□□□□□ -1.7
CHD1-204ENST00000505982 TMEM252Q8N6L7 170 aa4.41□□□□□ -1.7
CHD1-204ENST00000505982 OR4K14Q8NGD5 310 aa4.41□□□□□ -1.7
CHD1-204ENST00000505982 OR1L6Q8NGR2 347 aa4.41□□□□□ -1.7
CHD1-204ENST00000505982 FAM110BQ8TC76 370 aa4.41□□□□□ -1.7
CHD1-204ENST00000505982 ACTRT1Q8TDG2 376 aa4.41□□□□□ -1.7
CHD1-204ENST00000505982 NUS1Q96E22 293 aa4.41□□□□□ -1.7
CHD1-204ENST00000505982 SMIM14Q96QK8 99 aa4.41□□□□□ -1.7
CHD1-204ENST00000505982 ZNF184Q99676 751 aaPredicted RBP4.41□□□□□ -1.7
CHD1-204ENST00000505982 PYGO2Q9BRQ0 406 aa4.41□□□□□ -1.7
CHD1-204ENST00000505982 SLC7A10Q9NS82 523 aa4.41□□□□□ -1.7
CHD1-204ENST00000505982 KLHL28Q9NXS3 571 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms