RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 ZNF281Q9Y2X9 895 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 COL4A4P53420 1690 aaPredicted RBP6.95□□□□□ -1.3
NEDD9-208ENST00000504387 MDC1Q14676 2089 aaKnown RBP6.95□□□□□ -1.3
NEDD9-208ENST00000504387 TRAV1-2A0A0B4J238 106 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 hCG_1809904A0A1W2PP81 198 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 A0A1W2PPV9 198 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 A0A1W2PR64 198 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 A0A1W2PRV1 198 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 TUBAL3A6NHL2 446 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 RFPL4AA6NLU0 287 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 HMSDA8MTL9 139 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 RFPL4AL1F8VTS6 287 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 DCTN6O00399 190 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 UBBP0CG47 229 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 UBCP0CG48 685 aaKnown RBP6.94□□□□□ -1.3
NEDD9-208ENST00000504387 MGMTP16455 207 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 ZNF14P17017 642 aaPredicted RBP6.94□□□□□ -1.3
NEDD9-208ENST00000504387 PTAFRP25105 342 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 ITGA3P26006 1051 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 RFC3P40938 356 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 EMDP50402 254 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 CXADRP78310 365 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 DHRS2Q13268 280 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 NKAPLQ5M9Q1 402 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 FAM109BQ6ICB4 259 aaPredicted RBP6.94□□□□□ -1.3
NEDD9-208ENST00000504387 CNKSR3Q6P9H4 555 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 GALNTL5Q7Z4T8 443 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 PARGQ86W56 976 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 PPP1R3BQ86XI6 285 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 NAXDQ8IW45 347 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 CCDC36Q8IYA8 594 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 JAGN1Q8N5M9 183 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 SETD7Q8WTS6 366 aaKnown RBP6.94□□□□□ -1.3
NEDD9-208ENST00000504387 ZBTB8AQ96BR9 441 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 WDR34Q96EX3 536 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 ZC3H10Q96K80 434 aaKnown RBP6.94□□□□□ -1.3
NEDD9-208ENST00000504387 RHOVQ96L33 236 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 SLC25A32Q9H2D1 315 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 PRDM7Q9NQW5 492 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 MBNL1Q9NR56 388 aaKnown RBP6.94□□□□□ -1.3
NEDD9-208ENST00000504387 DZANK1Q9NVP4 752 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 PPIL1Q9Y3C6 166 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 RNF215Q9Y6U7 377 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 NAP1L6A6NFF2 107 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 OTOL1A6NHN0 477 aaPredicted RBP6.94□□□□□ -1.3
NEDD9-208ENST00000504387 SNRPGP15A8MWD9 76 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 C11orf98E9PRG8 122 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 M0R036 132 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 GLSO94925 669 aaPredicted RBP6.94□□□□□ -1.3
NEDD9-208ENST00000504387 ARG1P05089 322 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 CPT2P23786 658 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 SDHAP31040 664 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 SPOCK1Q08629 439 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 TRAM1Q15629 374 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 C2orf76Q3KRA6 126 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 CDCP2Q5VXM1 449 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 SLC48A1Q6P1K1 146 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 RPL22L1Q6P5R6 122 aaKnown RBP6.94□□□□□ -1.3
NEDD9-208ENST00000504387 ABHD17CQ6PCB6 329 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 VITQ6UXI7 678 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 OVCH1Q7RTY7 1134 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 MDGA2Q7Z553 956 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 BPIFB2Q8N4F0 458 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 FRMD1Q8N878 549 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 OR2A1Q8NGT9 310 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 OR2L2Q8NH16 312 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 TCEAL3Q969E4 200 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 LMLNQ96KR4 655 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 CNTNAP3BQ96NU0 1288 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 KXD1Q9BQD3 176 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 WDR76Q9H967 626 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 PRSS16Q9NQE7 514 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.94□□□□□ -1.3
NEDD9-208ENST00000504387 FLRT3Q9NZU0 649 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 FRRS1LQ9P0K9 344 aa6.94□□□□□ -1.3
NEDD9-208ENST00000504387 ATXN7L1Q9ULK2 861 aaPredicted RBP6.94□□□□□ -1.3
NEDD9-208ENST00000504387 A0A087WV62 115 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 ITGA5P08648 1049 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 AKAIN1P0CW23 69 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 CD1CP29017 333 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 PNLIPRP2P54317 469 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 ADAM8P78325 824 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 SLC9A3R2Q15599 337 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 GFOD2Q3B7J2 385 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 ZNF542PQ5EBM4 170 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 ACER2Q5QJU3 275 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 DCST2Q5T1A1 773 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 SLC39A5Q6ZMH5 540 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 ZNF615Q8N8J6 731 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 OR5T2Q8NGG2 359 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 MIB2Q96AX9 1013 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 AKR1E2Q96JD6 320 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 MRGPRX3Q96LB0 322 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 LAT2Q9GZY6 243 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 GAREM1Q9H706 876 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 BARX1Q9HBU1 254 aaPredicted RBP6.93□□□□□ -1.3
NEDD9-208ENST00000504387 ZNF223Q9UK11 482 aaPredicted RBP6.93□□□□□ -1.3
NEDD9-208ENST00000504387 TMED7Q9Y3B3 224 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 GGT3PA6NGU5 568 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 A6NLC8 198 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms