RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 STAC2Q6ZMT1 411 aa10.48□□□□□ -0.73
CUX1-210ENST00000497815 PTCHD4Q6ZW05 846 aa10.48□□□□□ -0.73
CUX1-210ENST00000497815 ABHD12BQ7Z5M8 362 aaPredicted RBP10.48□□□□□ -0.73
CUX1-210ENST00000497815 LNX2Q8N448 690 aa10.48□□□□□ -0.73
CUX1-210ENST00000497815 SDR9C7Q8NEX9 313 aa10.48□□□□□ -0.73
CUX1-210ENST00000497815 NSMAFQ92636 917 aa10.48□□□□□ -0.73
CUX1-210ENST00000497815 KISS1RQ969F8 398 aaPredicted RBP10.48□□□□□ -0.73
CUX1-210ENST00000497815 MCHR2Q969V1 340 aa10.48□□□□□ -0.73
CUX1-210ENST00000497815 ZNF837Q96EG3 531 aaPredicted RBP10.48□□□□□ -0.73
CUX1-210ENST00000497815 LRR1Q96L50 414 aa10.48□□□□□ -0.73
CUX1-210ENST00000497815 RBP7Q96R05 134 aa10.48□□□□□ -0.73
CUX1-210ENST00000497815 KCNK17Q96T54 332 aa10.48□□□□□ -0.73
CUX1-210ENST00000497815 NMNAT3Q96T66 252 aa10.48□□□□□ -0.73
CUX1-210ENST00000497815 FN3KQ9H479 309 aa10.48□□□□□ -0.73
CUX1-210ENST00000497815 GPR35Q9HC97 309 aa10.48□□□□□ -0.73
CUX1-210ENST00000497815 NPDC1Q9NQX5 325 aaPredicted RBP10.48□□□□□ -0.73
CUX1-210ENST00000497815 ELOVL5Q9NYP7 299 aa10.48□□□□□ -0.73
CUX1-210ENST00000497815 BAIAP2Q9UQB8 552 aa10.48□□□□□ -0.73
CUX1-210ENST00000497815 NCOA6Q14686 2063 aaPredicted RBP10.48□□□□□ -0.73
CUX1-210ENST00000497815 SLC22A23A1A5C7 686 aa10.47□□□□□ -0.73
CUX1-210ENST00000497815 PRSS37A4D1T9 235 aa10.47□□□□□ -0.73
CUX1-210ENST00000497815 C16orf97H3BN30 126 aa10.47□□□□□ -0.73
CUX1-210ENST00000497815 IDH3BO43837 385 aa10.47□□□□□ -0.73
CUX1-210ENST00000497815 CLDN1O95832 211 aa10.47□□□□□ -0.73
CUX1-210ENST00000497815 RENP00797 406 aa10.47□□□□□ -0.73
CUX1-210ENST00000497815 ITGA5P08648 1049 aa10.47□□□□□ -0.73
CUX1-210ENST00000497815 COX5AP20674 150 aa10.47□□□□□ -0.73
CUX1-210ENST00000497815 IL32P24001 234 aa10.47□□□□□ -0.73
CUX1-210ENST00000497815 MPGP29372 298 aa10.47□□□□□ -0.73
CUX1-210ENST00000497815 GRK5P34947 590 aa10.47□□□□□ -0.73
CUX1-210ENST00000497815 UGT2B10P36537 528 aa10.47□□□□□ -0.73
CUX1-210ENST00000497815 GIPRP48546 466 aa10.47□□□□□ -0.73
CUX1-210ENST00000497815 RAD23AP54725 363 aa10.47□□□□□ -0.73
CUX1-210ENST00000497815 ARF1P84077 181 aaKnown RBP10.47□□□□□ -0.73
CUX1-210ENST00000497815 CDK5Q00535 292 aa10.47□□□□□ -0.73
CUX1-210ENST00000497815 ITGADQ13349 1161 aa10.47□□□□□ -0.73
CUX1-210ENST00000497815 HIST3H3Q16695 136 aa10.47□□□□□ -0.73
CUX1-210ENST00000497815 FBXL19-AS1Q494R0 122 aa10.47□□□□□ -0.73
CUX1-210ENST00000497815 SFRP5Q5T4F7 317 aa10.47□□□□□ -0.73
CUX1-210ENST00000497815 ALKBH2Q6NS38 261 aa10.47□□□□□ -0.73
CUX1-210ENST00000497815 LRFN4Q6PJG9 635 aa10.47□□□□□ -0.73
CUX1-210ENST00000497815 BHLHA15Q7RTS1 189 aaPredicted RBP10.47□□□□□ -0.73
CUX1-210ENST00000497815 ADCK1Q86TW2 530 aa10.47□□□□□ -0.73
CUX1-210ENST00000497815 ZNF433Q8N7K0 673 aaPredicted RBP10.47□□□□□ -0.73
CUX1-210ENST00000497815 CYB561A3Q8NBI2 242 aa10.47□□□□□ -0.73
CUX1-210ENST00000497815 HTRA1Q92743 480 aa10.47□□□□□ -0.73
CUX1-210ENST00000497815 OTULINQ96BN8 352 aa10.47□□□□□ -0.73
CUX1-210ENST00000497815 ALG12Q9BV10 488 aa10.47□□□□□ -0.73
CUX1-210ENST00000497815 TEX12Q9BXU0 123 aa10.47□□□□□ -0.73
CUX1-210ENST00000497815 SYT4Q9H2B2 425 aa10.47□□□□□ -0.73
CUX1-210ENST00000497815 TAS2R16Q9NYV7 291 aa10.47□□□□□ -0.73
CUX1-210ENST00000497815 ENOPH1Q9UHY7 261 aa10.47□□□□□ -0.73
CUX1-210ENST00000497815 A0A096LPE4 126 aa10.46□□□□□ -0.73
CUX1-210ENST00000497815 IGKV1D-43A0A0B4J1Z2 117 aa10.46□□□□□ -0.73
CUX1-210ENST00000497815 A0A1W2PPL8 197 aa10.46□□□□□ -0.73
CUX1-210ENST00000497815 A0A1W2PPZ6 126 aa10.46□□□□□ -0.73
CUX1-210ENST00000497815 OR6C68A6NDL8 312 aa10.46□□□□□ -0.73
CUX1-210ENST00000497815 RIIAD1A6NNX1 92 aa10.46□□□□□ -0.73
CUX1-210ENST00000497815 CENPBD1B2RD01 187 aa10.46□□□□□ -0.73
CUX1-210ENST00000497815 M0R129 80 aa10.46□□□□□ -0.73
CUX1-210ENST00000497815 CASQ2O14958 399 aaPredicted RBP10.46□□□□□ -0.73
CUX1-210ENST00000497815 DHHO43323 396 aa10.46□□□□□ -0.73
CUX1-210ENST00000497815 SLC16A7O60669 478 aa10.46□□□□□ -0.73
CUX1-210ENST00000497815 SNAP29O95721 258 aa10.46□□□□□ -0.73
CUX1-210ENST00000497815 IFNGP01579 166 aa10.46□□□□□ -0.73
CUX1-210ENST00000497815 NR2C1P13056 603 aa10.46□□□□□ -0.73
CUX1-210ENST00000497815 CCKARP32238 428 aa10.46□□□□□ -0.73
CUX1-210ENST00000497815 CENPAP49450 140 aa10.46□□□□□ -0.73
CUX1-210ENST00000497815 ZNF84P51523 738 aa10.46□□□□□ -0.73
CUX1-210ENST00000497815 TGFBR3Q03167 851 aa10.46□□□□□ -0.73
CUX1-210ENST00000497815 NPRL3Q12980 569 aa10.46□□□□□ -0.73
CUX1-210ENST00000497815 RIPK1Q13546 671 aa10.46□□□□□ -0.73
CUX1-210ENST00000497815 CRMP1Q14194 572 aa10.46□□□□□ -0.73
CUX1-210ENST00000497815 STK11Q15831 433 aa10.46□□□□□ -0.73
CUX1-210ENST00000497815 THEM4Q5T1C6 240 aa10.46□□□□□ -0.73
CUX1-210ENST00000497815 OGFRL1Q5TC84 451 aaPredicted RBP10.46□□□□□ -0.73
CUX1-210ENST00000497815 SLC37A3Q8NCC5 494 aa10.46□□□□□ -0.73
CUX1-210ENST00000497815 NRG4Q8WWG1 115 aa10.46□□□□□ -0.73
CUX1-210ENST00000497815 S100PBPQ96BU1 408 aa10.46□□□□□ -0.73
CUX1-210ENST00000497815 NMD3Q96D46 503 aaKnown RBP10.46□□□□□ -0.73
CUX1-210ENST00000497815 PLEKHA8Q96JA3 519 aa10.46□□□□□ -0.73
CUX1-210ENST00000497815 FOXN4Q96NZ1 517 aa10.46□□□□□ -0.73
CUX1-210ENST00000497815 TSSK2Q96PF2 358 aa10.46□□□□□ -0.73
CUX1-210ENST00000497815 HS3ST6Q96QI5 342 aa10.46□□□□□ -0.73
CUX1-210ENST00000497815 MBOAT4Q96T53 435 aa10.46□□□□□ -0.73
CUX1-210ENST00000497815 GABARAPL3Q9BY60 117 aa10.46□□□□□ -0.73
CUX1-210ENST00000497815 ACTR6Q9GZN1 396 aa10.46□□□□□ -0.73
CUX1-210ENST00000497815 NUAK2Q9H093 628 aa10.46□□□□□ -0.73
CUX1-210ENST00000497815 TOR3AQ9H497 397 aa10.46□□□□□ -0.73
CUX1-210ENST00000497815 SLC25A19Q9HC21 320 aa10.46□□□□□ -0.73
CUX1-210ENST00000497815 SRA1Q9HD15 236 aaKnown RBP10.46□□□□□ -0.73
CUX1-210ENST00000497815 RPRD1BQ9NQG5 326 aaKnown RBP10.46□□□□□ -0.73
CUX1-210ENST00000497815 TVP23BQ9NYZ1 205 aa10.46□□□□□ -0.73
CUX1-210ENST00000497815 KLHL21Q9UJP4 597 aa10.46□□□□□ -0.73
CUX1-210ENST00000497815 GPR52Q9Y2T5 361 aa10.46□□□□□ -0.73
CUX1-210ENST00000497815 HIVEP3Q5T1R4 2406 aa10.45□□□□□ -0.74
CUX1-210ENST00000497815 A0A1W2PR80 420 aa10.45□□□□□ -0.74
CUX1-210ENST00000497815 FAM183AA6NL82 134 aa10.45□□□□□ -0.74
CUX1-210ENST00000497815 ZAR1LA6NP61 321 aa10.45□□□□□ -0.74
CUX1-210ENST00000497815 FAM171A2A8MVW0 826 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms